RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W MPH2P0CD99 609 aa2.78□□□□□ -1.96
MCD1YDL003W SCT1P32784 759 aa2.78□□□□□ -1.96
MCD1YDL003W ASI2P53895 289 aa2.78□□□□□ -1.96
MCD1YDL003W EAF7P53911 425 aaKnown RBP2.78□□□□□ -1.96
MCD1YDL003W MRI1Q06489 411 aaKnown RBP2.78□□□□□ -1.96
MCD1YDL003W RPN13O13563 156 aa2.77□□□□□ -1.97
MCD1YDL003W PRP4P20053 465 aaKnown RBP2.77□□□□□ -1.97
MCD1YDL003W CYS3P31373 394 aaKnown RBP2.77□□□□□ -1.97
MCD1YDL003W REC104P33323 182 aa2.77□□□□□ -1.97
MCD1YDL003W SAK1P38990 1142 aa2.77□□□□□ -1.97
MCD1YDL003W FMP52P40008 231 aa2.77□□□□□ -1.97
MCD1YDL003W MAD1P40957 749 aa2.77□□□□□ -1.97
MCD1YDL003W LCD1Q04377 747 aa2.77□□□□□ -1.97
MCD1YDL003W LAT1P12695 482 aaKnown RBP2.76□□□□□ -1.97
MCD1YDL003W CLC1P17891 233 aa2.76□□□□□ -1.97
MCD1YDL003W AFR1P33304 620 aa2.76□□□□□ -1.97
MCD1YDL003W GAT1P43574 510 aa2.76□□□□□ -1.97
MCD1YDL003W YFR016CP43597 1233 aaKnown RBP2.76□□□□□ -1.97
MCD1YDL003W SCS3P53012 380 aa2.76□□□□□ -1.97
MCD1YDL003W TEL2P53038 688 aa2.76□□□□□ -1.97
MCD1YDL003W TCB3Q03640 1545 aaKnown RBP2.76□□□□□ -1.97
MCD1YDL003W SEC3P33332 1336 aaKnown RBP2.76□□□□□ -1.97
MCD1YDL003W YLR415CO13578 112 aa2.76□□□□□ -1.97
MCD1YDL003W PTP1P25044 335 aa2.76□□□□□ -1.97
MCD1YDL003W MRP8P35719 219 aa2.76□□□□□ -1.97
MCD1YDL003W REV7P38927 245 aa2.76□□□□□ -1.97
MCD1YDL003W SIT1P39980 628 aa2.76□□□□□ -1.97
MCD1YDL003W MUS81Q04149 632 aaPredicted RBP2.76□□□□□ -1.97
MCD1YDL003W OPI10Q08202 246 aa2.76□□□□□ -1.97
MCD1YDL003W RNA1P11745 407 aaKnown RBP2.75□□□□□ -1.97
MCD1YDL003W HOM2P13663 365 aaKnown RBP2.75□□□□□ -1.97
MCD1YDL003W PRI2P20457 528 aa2.75□□□□□ -1.97
MCD1YDL003W PBY1P38254 753 aa2.75□□□□□ -1.97
MCD1YDL003W BCD1P38772 366 aa2.75□□□□□ -1.97
MCD1YDL003W YEL020CP39994 560 aa2.75□□□□□ -1.97
MCD1YDL003W TOK1P40310 691 aa2.75□□□□□ -1.97
MCD1YDL003W SSY5P47002 699 aa2.75□□□□□ -1.97
MCD1YDL003W CTR1P49573 406 aa2.75□□□□□ -1.97
MCD1YDL003W YAP1802P53309 568 aa2.75□□□□□ -1.97
MCD1YDL003W DUS1P53759 423 aaKnown RBP2.75□□□□□ -1.97
MCD1YDL003W SMX3P54999 86 aaPredicted RBP2.75□□□□□ -1.97
MCD1YDL003W GLG1P36143 616 aa2.74□□□□□ -1.97
MCD1YDL003W ERT1P38140 529 aa2.74□□□□□ -1.97
MCD1YDL003W GGA2P38817 585 aaKnown RBP2.74□□□□□ -1.97
MCD1YDL003W NDC80P40460 691 aa2.74□□□□□ -1.97
MCD1YDL003W RSC3Q06639 885 aa2.74□□□□□ -1.97
MCD1YDL003W CDC11P32458 415 aa2.73□□□□□ -1.97
MCD1YDL003W YRB30P53107 440 aaPredicted RBP2.73□□□□□ -1.97
MCD1YDL003W HAL9Q12180 1030 aa2.73□□□□□ -1.97
MCD1YDL003W TAF3Q12297 353 aa2.73□□□□□ -1.97
MCD1YDL003W YPR071WQ12346 211 aa2.73□□□□□ -1.97
MCD1YDL003W PRC1P00729 532 aa2.73□□□□□ -1.97
MCD1YDL003W NAP1P25293 417 aaKnown RBP2.73□□□□□ -1.97
MCD1YDL003W SPC29P33419 253 aa2.73□□□□□ -1.97
MCD1YDL003W SAP190P36123 1033 aa2.73□□□□□ -1.97
MCD1YDL003W FPR3P38911 411 aaKnown RBP2.73□□□□□ -1.97
MCD1YDL003W FUN12P39730 1002 aaKnown RBP2.73□□□□□ -1.97
MCD1YDL003W NIT3P49954 291 aa2.73□□□□□ -1.97
MCD1YDL003W UBC11P52492 156 aa2.73□□□□□ -1.97
MCD1YDL003W NOG2P53742 486 aaKnown RBP2.73□□□□□ -1.97
MCD1YDL003W RIM13Q03792 727 aa2.73□□□□□ -1.97
MCD1YDL003W ASM4Q05166 528 aa2.73□□□□□ -1.97
MCD1YDL003W SLK19Q08581 821 aaKnown RBP2.73□□□□□ -1.97
MCD1YDL003W TGL5Q12043 749 aa2.73□□□□□ -1.97
MCD1YDL003W PRP9P19736 530 aaKnown RBP2.72□□□□□ -1.97
MCD1YDL003W VPS34P22543 875 aa2.72□□□□□ -1.97
MCD1YDL003W EMP70P32802 667 aa2.72□□□□□ -1.97
MCD1YDL003W IRR1P40541 1150 aa2.72□□□□□ -1.97
MCD1YDL003W PFA3P42836 336 aa2.72□□□□□ -1.97
MCD1YDL003W SEG1Q04279 960 aa2.72□□□□□ -1.97
MCD1YDL003W YOR022CQ12204 715 aa2.72□□□□□ -1.97
MCD1YDL003W ATG11Q12527 1178 aa2.72□□□□□ -1.97
MCD1YDL003W YBR284WP38150 797 aa2.71□□□□□ -1.98
MCD1YDL003W ARG2P40360 574 aa2.71□□□□□ -1.98
MCD1YDL003W HOS4P40480 1083 aa2.71□□□□□ -1.98
MCD1YDL003W CCT7P42943 550 aaKnown RBP2.71□□□□□ -1.98
MCD1YDL003W YKL069WP36088 180 aa2.71□□□□□ -1.98
MCD1YDL003W UBC9P50623 157 aaPredicted RBP2.71□□□□□ -1.98
MCD1YDL003W SPT7P35177 1332 aa2.7□□□□□ -1.98
MCD1YDL003W STH1P32597 1359 aa2.7□□□□□ -1.98
MCD1YDL003W DAL7P21826 554 aa2.7□□□□□ -1.98
MCD1YDL003W CCR4P31384 837 aaKnown RBP2.7□□□□□ -1.98
MCD1YDL003W HIR1P32479 840 aa2.7□□□□□ -1.98
MCD1YDL003W YBR259WP38338 688 aa2.7□□□□□ -1.98
MCD1YDL003W MTR3P48240 250 aaPredicted RBP2.7□□□□□ -1.98
MCD1YDL003W YML020WQ03722 664 aa2.7□□□□□ -1.98
MCD1YDL003W GAD1Q04792 585 aa2.7□□□□□ -1.98
MCD1YDL003W SPP41P38904 1435 aa2.69□□□□□ -1.98
MCD1YDL003W TOP3P13099 656 aa2.69□□□□□ -1.98
MCD1YDL003W BDH2P39713 417 aa2.69□□□□□ -1.98
MCD1YDL003W PAC2P39937 518 aa2.69□□□□□ -1.98
MCD1YDL003W NET1P47035 1189 aa2.69□□□□□ -1.98
MCD1YDL003W CWC22P53333 577 aaKnown RBP2.69□□□□□ -1.98
MCD1YDL003W BUL2Q03758 920 aaKnown RBP2.69□□□□□ -1.98
MCD1YDL003W FPR4Q06205 392 aaPredicted RBP2.69□□□□□ -1.98
MCD1YDL003W INO80P53115 1489 aa2.68□□□□□ -1.98
MCD1YDL003W MMS22Q06164 1454 aa2.68□□□□□ -1.98
MCD1YDL003W HBS1P32769 611 aaKnown RBP2.68□□□□□ -1.98
MCD1YDL003W ALR2P43553 858 aa2.68□□□□□ -1.98
MCD1YDL003W ENV7Q12003 364 aa2.68□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms