RNA–Protein interactions for RNA: YCR093W

CDC39, Transcript of Component of the CCR4-NOT1 core complex, yeastyeast

Gene CDC39, Length 6,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC39YCR093W SPO14P36126 1683 aa1.45□□□□□ -2.18
CDC39YCR093W YEF3P16521 1044 aaKnown RBP1.45□□□□□ -2.18
CDC39YCR093W PRE8P23639 250 aa1.45□□□□□ -2.18
CDC39YCR093W HIR1P32479 840 aa1.45□□□□□ -2.18
CDC39YCR093W YBR284WP38150 797 aa1.45□□□□□ -2.18
CDC39YCR093W YBR238CP38330 731 aaKnown RBP1.45□□□□□ -2.18
CDC39YCR093W REV7P38927 245 aa1.45□□□□□ -2.18
CDC39YCR093W UME6P39001 836 aa1.45□□□□□ -2.18
CDC39YCR093W FYV10P40492 516 aa1.45□□□□□ -2.18
CDC39YCR093W CAF16P43569 289 aa1.45□□□□□ -2.18
CDC39YCR093W BNA2P47125 453 aa1.45□□□□□ -2.18
CDC39YCR093W SPC105P53148 917 aa1.45□□□□□ -2.18
CDC39YCR093W DAK1P54838 584 aaKnown RBP1.45□□□□□ -2.18
CDC39YCR093W ATP25Q03153 612 aa1.45□□□□□ -2.18
CDC39YCR093W DLT1Q04216 342 aa1.45□□□□□ -2.18
CDC39YCR093W RGA2Q06407 1009 aa1.45□□□□□ -2.18
CDC39YCR093W TDA6Q06466 467 aa1.45□□□□□ -2.18
CDC39YCR093W MDM12Q92328 271 aa1.45□□□□□ -2.18
CDC39YCR093W SSD1P24276 1250 aaKnown RBP RIP-Chip data1.45□□□□□ -2.18not detected
CDC39YCR093W KIN82P25341 720 aa1.45□□□□□ -2.18
CDC39YCR093W PNT1P38969 423 aa1.45□□□□□ -2.18
CDC39YCR093W RAD26P40352 1085 aa1.45□□□□□ -2.18
CDC39YCR093W MET12P46151 657 aa1.45□□□□□ -2.18
CDC39YCR093W TAF8Q03750 510 aa1.45□□□□□ -2.18
CDC39YCR093W IOC4Q04213 475 aa1.45□□□□□ -2.18
CDC39YCR093W PCK1P10963 549 aa1.44□□□□□ -2.18
CDC39YCR093W MFT1P33441 392 aaKnown RBP1.44□□□□□ -2.18
CDC39YCR093W WHI3P34761 661 aaKnown RBP1.44□□□□□ -2.18
CDC39YCR093W MOT2P34909 587 aaKnown RBP1.44□□□□□ -2.18
CDC39YCR093W BAP2P38084 609 aa1.44□□□□□ -2.18
CDC39YCR093W KTR4P38131 464 aa1.44□□□□□ -2.18
CDC39YCR093W YBR259WP38338 688 aa1.44□□□□□ -2.18
CDC39YCR093W SKN7P38889 622 aa1.44□□□□□ -2.18
CDC39YCR093W CKB2P38930 258 aa1.44□□□□□ -2.18
CDC39YCR093W FAA4P47912 694 aaKnown RBP1.44□□□□□ -2.18
CDC39YCR093W GYP7P48365 746 aa1.44□□□□□ -2.18
CDC39YCR093W YLR225CQ05948 407 aaKnown RBP1.44□□□□□ -2.18
CDC39YCR093W UBX5Q06682 500 aa1.44□□□□□ -2.18
CDC39YCR093W MET7Q08645 548 aa1.44□□□□□ -2.18
CDC39YCR093W KCS1Q12494 1050 aa1.44□□□□□ -2.18
CDC39YCR093W ADR1P07248 1323 aa1.44□□□□□ -2.18
CDC39YCR093W TUF1P02992 437 aaKnown RBP1.44□□□□□ -2.18
CDC39YCR093W TOP3P13099 656 aa1.44□□□□□ -2.18
CDC39YCR093W DAL7P21826 554 aa1.44□□□□□ -2.18
CDC39YCR093W SAP4P53036 818 aa1.44□□□□□ -2.18
CDC39YCR093W CTK1Q03957 528 aaKnown RBP1.44□□□□□ -2.18
CDC39YCR093W YNL193WP53870 558 aa1.44□□□□□ -2.18
CDC39YCR093W MAP1Q01662 387 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
CDC39YCR093W TIM50Q02776 476 aa1.44□□□□□ -2.18
CDC39YCR093W ECM5Q03214 1411 aa1.44□□□□□ -2.18
CDC39YCR093W RPN7Q06103 429 aaKnown RBP1.44□□□□□ -2.18
CDC39YCR093W PSR2Q07949 397 aa1.44□□□□□ -2.18
CDC39YCR093W YPR027CQ12079 277 aa1.44□□□□□ -2.18
CDC39YCR093W SOD2P00447 233 aa1.44□□□□□ -2.18
CDC39YCR093W CAN1P04817 590 aa1.44□□□□□ -2.18
CDC39YCR093W CAP1P28495 268 aaKnown RBP1.44□□□□□ -2.18
CDC39YCR093W SRP101P32916 621 aa1.44□□□□□ -2.18
CDC39YCR093W DHR2P36009 735 aaPredicted RBP1.44□□□□□ -2.18
CDC39YCR093W APN2P38207 520 aa1.44□□□□□ -2.18
CDC39YCR093W TAF1P46677 1066 aa1.44□□□□□ -2.18
CDC39YCR093W PEX14P53112 341 aa1.44□□□□□ -2.18
CDC39YCR093W SKY1Q03656 742 aa1.44□□□□□ -2.18
CDC39YCR093W CLU1Q03690 1277 aaKnown RBP1.44□□□□□ -2.18
CDC39YCR093W SGO1Q08490 590 aa1.44□□□□□ -2.18
CDC39YCR093W LYS21Q12122 440 aaKnown RBP1.44□□□□□ -2.18
CDC39YCR093W CTT1P06115 562 aa1.44□□□□□ -2.18
CDC39YCR093W SPE1P08432 466 aa1.44□□□□□ -2.18
CDC39YCR093W YER152CP10356 443 aa1.44□□□□□ -2.18
CDC39YCR093W URA1P28272 314 aaPredicted RBP1.44□□□□□ -2.18
CDC39YCR093W RAD16P31244 790 aa1.44□□□□□ -2.18
CDC39YCR093W STE13P33894 931 aa1.44□□□□□ -2.18
CDC39YCR093W LOT5P34234 306 aa1.44□□□□□ -2.18
CDC39YCR093W MBP1P39678 833 aa1.44□□□□□ -2.18
CDC39YCR093W CEP3P40969 608 aa1.44□□□□□ -2.18
CDC39YCR093W IML2P47031 731 aa1.44□□□□□ -2.18
CDC39YCR093W NRG1Q03125 231 aa1.44□□□□□ -2.18
CDC39YCR093W MSC2Q03455 724 aa1.44□□□□□ -2.18
CDC39YCR093W NOP12Q08208 459 aaKnown RBP1.44□□□□□ -2.18
CDC39YCR093W TRM11Q12463 433 aa1.44□□□□□ -2.18
CDC39YCR093W HBN1Q96VH4 193 aa1.44□□□□□ -2.18
CDC39YCR093W PFK1P16861 987 aaKnown RBP1.43□□□□□ -2.18
CDC39YCR093W YAP1801P38856 637 aa1.43□□□□□ -2.18
CDC39YCR093W SPT20P50875 604 aa1.43□□□□□ -2.18
CDC39YCR093W ENV7Q12003 364 aa1.43□□□□□ -2.18
CDC39YCR093W ZRT2Q12436 422 aa1.43□□□□□ -2.18
CDC39YCR093W ATG11Q12527 1178 aa1.43□□□□□ -2.18
CDC39YCR093W GRX4P32642 244 aa1.43□□□□□ -2.18
CDC39YCR093W UGA4P32837 571 aa1.43□□□□□ -2.18
CDC39YCR093W TIM23P32897 222 aa1.43□□□□□ -2.18
CDC39YCR093W MTC2P34246 357 aa1.43□□□□□ -2.18
CDC39YCR093W PAF1P38351 445 aa1.43□□□□□ -2.18
CDC39YCR093W GZF3P42944 551 aaKnown RBP1.43□□□□□ -2.18
CDC39YCR093W SQS1P53866 767 aaKnown RBP1.43□□□□□ -2.18
CDC39YCR093W MRPL22P53881 309 aa1.43□□□□□ -2.18
CDC39YCR093W YKR011CQ02209 353 aa1.43□□□□□ -2.18
CDC39YCR093W YPL062WQ02781 134 aa1.43□□□□□ -2.18
CDC39YCR093W YMR210WQ03649 449 aa1.43□□□□□ -2.18
CDC39YCR093W ENB1Q08299 606 aa1.43□□□□□ -2.18
CDC39YCR093W SRD1P09007 221 aa1.43□□□□□ -2.18
CDC39YCR093W CAF20P12962 161 aaKnown RBP1.43□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms