RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W YDR341CQ05506 607 aaKnown RBP3.79□□□□□ -1.8
NUP60YAR002W ACK1Q07622 623 aaPredicted RBP3.79□□□□□ -1.8
NUP60YAR002W KEL3Q08979 651 aaPredicted RBP3.79□□□□□ -1.8
NUP60YAR002W TY1A-GR1Q12085 440 aa3.79□□□□□ -1.8
NUP60YAR002W PTC5Q12511 572 aa3.79□□□□□ -1.8
NUP60YAR002W NBL1Q3E7Y6 73 aa3.79□□□□□ -1.8
NUP60YAR002W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.79□□□□□ -1.8
NUP60YAR002W TY1A-OLQ92392 440 aaKnown RBP3.79□□□□□ -1.8
NUP60YAR002W CIT1P00890 479 aa3.78□□□□□ -1.8
NUP60YAR002W CDC34P14682 295 aa3.78□□□□□ -1.8
NUP60YAR002W BMH1P29311 267 aaKnown RBP3.78□□□□□ -1.8
NUP60YAR002W RPL8BP29453 256 aaKnown RBP3.78□□□□□ -1.8
NUP60YAR002W YKU70P32807 602 aa3.78□□□□□ -1.8
NUP60YAR002W MDJ1P35191 511 aa3.78□□□□□ -1.8
NUP60YAR002W STU2P46675 888 aa3.78□□□□□ -1.8
NUP60YAR002W EAF6P47128 113 aa3.78□□□□□ -1.8
NUP60YAR002W YGL138CP53122 345 aa3.78□□□□□ -1.8
NUP60YAR002W BUD9P53226 547 aa3.78□□□□□ -1.8
NUP60YAR002W CWC24P53769 259 aa3.78□□□□□ -1.8
NUP60YAR002W UTP5Q04177 643 aaKnown RBP3.78□□□□□ -1.8
NUP60YAR002W EIS1Q05050 843 aaKnown RBP3.78□□□□□ -1.8
NUP60YAR002W MMR1Q06324 491 aa3.78□□□□□ -1.8
NUP60YAR002W MAG2Q06436 670 aaKnown RBP3.78□□□□□ -1.8
NUP60YAR002W HDA2Q06629 674 aa3.78□□□□□ -1.8
NUP60YAR002W TMA46Q12000 345 aaKnown RBP3.78□□□□□ -1.8
NUP60YAR002W YOR223WQ12015 292 aa3.78□□□□□ -1.8
NUP60YAR002W TIP41Q12199 356 aa3.78□□□□□ -1.8
NUP60YAR002W TY1A-NL1Q12391 440 aaKnown RBP3.78□□□□□ -1.8
NUP60YAR002W FLO11P08640 1367 aa3.78□□□□□ -1.8
NUP60YAR002W CTT1P06115 562 aa3.77□□□□□ -1.81
NUP60YAR002W HEM13P11353 328 aaKnown RBP3.77□□□□□ -1.81
NUP60YAR002W STI1P15705 589 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
NUP60YAR002W ALG1P16661 449 aa3.77□□□□□ -1.81
NUP60YAR002W RSC6P25632 483 aa3.77□□□□□ -1.81
NUP60YAR002W ICL1P28240 557 aaPredicted RBP3.77□□□□□ -1.81
NUP60YAR002W SAC6P32599 642 aaKnown RBP3.77□□□□□ -1.81
NUP60YAR002W ADD66P36040 267 aa3.77□□□□□ -1.81
NUP60YAR002W PSY4P38193 441 aa3.77□□□□□ -1.81
NUP60YAR002W TOM71P38825 639 aaKnown RBP3.77□□□□□ -1.81
NUP60YAR002W LYS14P40971 790 aa3.77□□□□□ -1.81
NUP60YAR002W TCB2P48231 1178 aa3.77□□□□□ -1.81
NUP60YAR002W RTC4P53850 401 aa3.77□□□□□ -1.81
NUP60YAR002W SIW14P53965 281 aa3.77□□□□□ -1.81
NUP60YAR002W KIN4Q01919 800 aa3.77□□□□□ -1.81
NUP60YAR002W YMR187CQ03236 431 aa3.77□□□□□ -1.81
NUP60YAR002W RKM2Q03942 479 aa3.77□□□□□ -1.81
NUP60YAR002W GFD1Q04839 188 aaKnown RBP3.77□□□□□ -1.81
NUP60YAR002W HCR1Q05775 265 aaKnown RBP3.77□□□□□ -1.81
NUP60YAR002W AVO1Q08236 1176 aa3.77□□□□□ -1.81
NUP60YAR002W TMA16Q08687 178 aa3.77□□□□□ -1.81
NUP60YAR002W DSE3Q08729 430 aa3.77□□□□□ -1.81
NUP60YAR002W RRG1Q12167 365 aaPredicted RBP3.77□□□□□ -1.81
NUP60YAR002W CLF1Q12309 687 aaPredicted RBP3.77□□□□□ -1.81
NUP60YAR002W HIS4P00815 799 aaKnown RBP3.77□□□□□ -1.81
NUP60YAR002W AI3P03877 415 aa3.77□□□□□ -1.81
NUP60YAR002W SRP54P20424 541 aaKnown RBP3.77□□□□□ -1.81
NUP60YAR002W SRM1P21827 482 aa3.77□□□□□ -1.81
NUP60YAR002W PRE8P23639 250 aa3.77□□□□□ -1.81
NUP60YAR002W CDC15P27636 974 aa3.77□□□□□ -1.81
NUP60YAR002W MFT1P33441 392 aaKnown RBP3.77□□□□□ -1.81
NUP60YAR002W CAB3P36076 571 aa3.77□□□□□ -1.81
NUP60YAR002W ADE17P38009 592 aaKnown RBP3.77□□□□□ -1.81
NUP60YAR002W GNP1P48813 663 aa3.77□□□□□ -1.81
NUP60YAR002W FOL1P53848 824 aa3.77□□□□□ -1.81
NUP60YAR002W VPS30Q02948 557 aa3.77□□□□□ -1.81
NUP60YAR002W AFT2Q08957 416 aa3.77□□□□□ -1.81
NUP60YAR002W PCL8Q08966 492 aa3.77□□□□□ -1.81
NUP60YAR002W LAP2Q10740 671 aa3.77□□□□□ -1.81
NUP60YAR002W NUC1P08466 329 aa3.76□□□□□ -1.81
NUP60YAR002W THR4P16120 514 aaKnown RBP3.76□□□□□ -1.81
NUP60YAR002W ACE2P21192 770 aa3.76□□□□□ -1.81
NUP60YAR002W CHS3P29465 1165 aa3.76□□□□□ -1.81
NUP60YAR002W SPC110P32380 944 aa3.76□□□□□ -1.81
NUP60YAR002W HIR1P32479 840 aa3.76□□□□□ -1.81
NUP60YAR002W AFG2P32794 780 aa3.76□□□□□ -1.81
NUP60YAR002W DUT1P33317 147 aa3.76□□□□□ -1.81
NUP60YAR002W HSE1P38753 452 aa3.76□□□□□ -1.81
NUP60YAR002W STT3P39007 718 aaKnown RBP3.76□□□□□ -1.81
NUP60YAR002W CCT3P39077 534 aaKnown RBP3.76□□□□□ -1.81
NUP60YAR002W PES4P39684 611 aa3.76□□□□□ -1.81
NUP60YAR002W VAC8P39968 578 aa3.76□□□□□ -1.81
NUP60YAR002W TPM2P40414 161 aa3.76□□□□□ -1.81
NUP60YAR002W PRY1P47032 299 aa3.76□□□□□ -1.81
NUP60YAR002W RET3P53600 189 aa3.76□□□□□ -1.81
NUP60YAR002W NCE103P53615 221 aa3.76□□□□□ -1.81
NUP60YAR002W VPS75P53853 264 aa3.76□□□□□ -1.81
NUP60YAR002W ALD6P54115 500 aaKnown RBP3.76□□□□□ -1.81
NUP60YAR002W MDM1Q01846 1127 aa3.76□□□□□ -1.81
NUP60YAR002W HOS3Q02959 697 aaKnown RBP3.76□□□□□ -1.81
NUP60YAR002W DOT1Q04089 582 aaKnown RBP3.76□□□□□ -1.81
NUP60YAR002W SKG3Q06315 1026 aa3.76□□□□□ -1.81
NUP60YAR002W PSR2Q07949 397 aa3.76□□□□□ -1.81
NUP60YAR002W ALG6Q12001 544 aaKnown RBP3.76□□□□□ -1.81
NUP60YAR002W REC8Q12188 680 aa3.76□□□□□ -1.81
NUP60YAR002W NOP58Q12499 511 aaKnown RBP3.76□□□□□ -1.81
NUP60YAR002W YPR053CQ6Q5F3 151 aa3.76□□□□□ -1.81
NUP60YAR002W PHO13P19881 312 aa3.75□□□□□ -1.81
NUP60YAR002W SAS3P34218 831 aa3.75□□□□□ -1.81
NUP60YAR002W SAP190P36123 1033 aa3.75□□□□□ -1.81
NUP60YAR002W SHC1P39000 512 aa3.75□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms