RNA–Protein interactions for RNA: HRA1

HRA1, Non-protein-coding RNA, yeastyeast

Gene HRA1, Length 564 nt, Biotype ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRA1HRA1 BUD6P41697 788 aa8.66□□□□□ -1.02
HRA1HRA1 GYP8P43570 497 aa8.66□□□□□ -1.02
HRA1HRA1 TAF1P46677 1066 aa8.66□□□□□ -1.02
HRA1HRA1 FYV8P46949 817 aaKnown RBP8.66□□□□□ -1.02
HRA1HRA1 VTC3Q02725 835 aa8.66□□□□□ -1.02
HRA1HRA1 YLR407WQ06070 228 aa8.66□□□□□ -1.02
HRA1HRA1 LEA1Q08963 238 aaPredicted RBP8.66□□□□□ -1.02
HRA1HRA1 GAL80P04387 435 aa8.65□□□□□ -1.02
HRA1HRA1 MED6P38782 295 aa8.65□□□□□ -1.02
HRA1HRA1 UBP5P39944 805 aa8.65□□□□□ -1.02
HRA1HRA1 PSP1P50896 841 aaKnown RBP8.65□□□□□ -1.02
HRA1HRA1 RTC4P53850 401 aa8.65□□□□□ -1.02
HRA1HRA1 NIS1P53939 407 aa8.65□□□□□ -1.02
HRA1HRA1 EIS1Q05050 843 aaKnown RBP8.65□□□□□ -1.02
HRA1HRA1 YPR084WQ06821 456 aa8.65□□□□□ -1.02
HRA1HRA1 GET3Q12154 354 aaKnown RBP8.65□□□□□ -1.02
HRA1HRA1 APM4Q99186 491 aa8.65□□□□□ -1.02
HRA1HRA1 MPD2Q99316 277 aa8.65□□□□□ -1.02
HRA1HRA1 RPL17AP05740 184 aaKnown RBP8.64□□□□□ -1.03
HRA1HRA1 RPL4AP10664 362 aaKnown RBP8.64□□□□□ -1.03
HRA1HRA1 PFK1P16861 987 aaKnown RBP8.64□□□□□ -1.03
HRA1HRA1 MRM1P25270 412 aa8.64□□□□□ -1.03
HRA1HRA1 RAM2P29703 316 aa8.64□□□□□ -1.03
HRA1HRA1 PGM2P37012 569 aaKnown RBP8.64□□□□□ -1.03
HRA1HRA1 DUG2P38149 878 aa8.64□□□□□ -1.03
HRA1HRA1 UBP13P38187 747 aa8.64□□□□□ -1.03
HRA1HRA1 YBL036CP38197 257 aa8.64□□□□□ -1.03
HRA1HRA1 NEM1P38757 446 aa8.64□□□□□ -1.03
HRA1HRA1 NUP82P40368 713 aa8.64□□□□□ -1.03
HRA1HRA1 VTC2P43585 828 aa8.64□□□□□ -1.03
HRA1HRA1 LSB3P43603 459 aaKnown RBP8.64□□□□□ -1.03
HRA1HRA1 ULI1P43604 169 aa8.64□□□□□ -1.03
HRA1HRA1 POL31P46957 487 aa8.64□□□□□ -1.03
HRA1HRA1 RPL17BP46990 184 aaKnown RBP8.64□□□□□ -1.03
HRA1HRA1 CCM1P48237 864 aaPredicted RBP8.64□□□□□ -1.03
HRA1HRA1 YGR153WP48238 217 aa8.64□□□□□ -1.03
HRA1HRA1 RPL4BP49626 362 aaKnown RBP8.64□□□□□ -1.03
HRA1HRA1 ADY4Q05955 493 aa8.64□□□□□ -1.03
HRA1HRA1 PIN2Q12057 282 aa8.64□□□□□ -1.03
HRA1HRA1 CTF3Q12748 733 aa8.64□□□□□ -1.03
HRA1HRA1 IRA2P19158 3079 aa8.64□□□□□ -1.03
HRA1HRA1 YEL076C-AP0CX16 216 aa8.63□□□□□ -1.03
HRA1HRA1 YLR464WP0CX17 216 aa8.63□□□□□ -1.03
HRA1HRA1 CKA2P19454 339 aa8.63□□□□□ -1.03
HRA1HRA1 MSH2P25847 964 aa8.63□□□□□ -1.03
HRA1HRA1 MSP1P28737 362 aa8.63□□□□□ -1.03
HRA1HRA1 YSC83P32792 385 aa8.63□□□□□ -1.03
HRA1HRA1 YHL017WP38745 532 aa8.63□□□□□ -1.03
HRA1HRA1 YEL076CP39971 216 aa8.63□□□□□ -1.03
HRA1HRA1 VPS25P47142 202 aa8.63□□□□□ -1.03
HRA1HRA1 ORC5P50874 479 aa8.63□□□□□ -1.03
HRA1HRA1 IMP4P53941 290 aaKnown RBP8.63□□□□□ -1.03
HRA1HRA1 YNL035CP53962 389 aaKnown RBP8.63□□□□□ -1.03
HRA1HRA1 TRL1P09880 827 aaKnown RBP8.62□□□□□ -1.03
HRA1HRA1 SSB1P11484 613 aaKnown RBP8.62□□□□□ -1.03
HRA1HRA1 ALG1P16661 449 aa8.62□□□□□ -1.03
HRA1HRA1 SIR1P21691 654 aa8.62□□□□□ -1.03
HRA1HRA1 SSB2P40150 613 aaKnown RBP8.62□□□□□ -1.03
HRA1HRA1 GUP1P53154 560 aa8.62□□□□□ -1.03
HRA1HRA1 TUB4P53378 473 aa8.62□□□□□ -1.03
HRA1HRA1 TOF1P53840 1238 aa8.62□□□□□ -1.03
HRA1HRA1 STE11P23561 717 aa8.61□□□□□ -1.03
HRA1HRA1 PEP7P32609 515 aa8.61□□□□□ -1.03
HRA1HRA1 SFB3P38810 929 aa8.61□□□□□ -1.03
HRA1HRA1 BIM1P40013 344 aa8.61□□□□□ -1.03
HRA1HRA1 TIF35Q04067 274 aaKnown RBP8.61□□□□□ -1.03
HRA1HRA1 DCS2Q12123 353 aa8.61□□□□□ -1.03
HRA1HRA1 HRT3Q12347 344 aa8.61□□□□□ -1.03
HRA1HRA1 KIP1P28742 1111 aa8.6□□□□□ -1.03
HRA1HRA1 SLA2P33338 968 aa8.6□□□□□ -1.03
HRA1HRA1 PET10P36139 283 aa8.6□□□□□ -1.03
HRA1HRA1 CDC27P38042 758 aa8.6□□□□□ -1.03
HRA1HRA1 YHR054CP38780 354 aa8.6□□□□□ -1.03
HRA1HRA1 TGL3P40308 642 aa8.6□□□□□ -1.03
HRA1HRA1 ENT3P47160 408 aa8.6□□□□□ -1.03
HRA1HRA1 ASN1P49089 572 aaKnown RBP8.6□□□□□ -1.03
HRA1HRA1 CWC24P53769 259 aa8.6□□□□□ -1.03
HRA1HRA1 NOP13P53883 403 aaKnown RBP RIP-Chip data8.6□□□□□ -1.03not detected
HRA1HRA1 SNU56Q03782 492 aaKnown RBP8.6□□□□□ -1.03
HRA1HRA1 CUR1Q06469 252 aa8.6□□□□□ -1.03
HRA1HRA1 PSK2Q08217 1101 aa8.6□□□□□ -1.03
HRA1HRA1 TAF10Q12030 206 aa8.6□□□□□ -1.03
HRA1HRA1 PCK1P10963 549 aa8.59□□□□□ -1.03
HRA1HRA1 BCH2P36122 765 aa8.59□□□□□ -1.03
HRA1HRA1 BTT1P40314 149 aaPredicted RBP8.59□□□□□ -1.03
HRA1HRA1 IES1P43579 692 aa8.59□□□□□ -1.03
HRA1HRA1 DAN4P47179 1161 aa8.59□□□□□ -1.03
HRA1HRA1 UBA2P52488 636 aa8.59□□□□□ -1.03
HRA1HRA1 UTP8P53276 713 aaKnown RBP8.59□□□□□ -1.03
HRA1HRA1 SEC5P89102 971 aa8.59□□□□□ -1.03
HRA1HRA1 UTP14Q04500 899 aaKnown RBP8.59□□□□□ -1.03
HRA1HRA1 TMN2Q04562 672 aa8.59□□□□□ -1.03
HRA1HRA1 SGT2Q12118 346 aaKnown RBP8.59□□□□□ -1.03
HRA1HRA1 ASP3-2P0CX77 362 aa8.58□□□□□ -1.04
HRA1HRA1 ASP3-3P0CX78 362 aa8.58□□□□□ -1.04
HRA1HRA1 ASP3-4P0CX79 362 aa8.58□□□□□ -1.04
HRA1HRA1 ASP3-1P0CZ17 362 aa8.58□□□□□ -1.04
HRA1HRA1 MTF1P14908 341 aaKnown RBP8.58□□□□□ -1.04
HRA1HRA1 MCM3P24279 971 aaKnown RBP8.58□□□□□ -1.04
HRA1HRA1 CSE1P33307 960 aa8.58□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 50.2 ms