RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 SRP68Q9UHB9 627 aaKnown RBP6.24□□□□□ -1.41
SSX9-202ENST00000608568 ERBB4Q15303 1308 aa6.24□□□□□ -1.41
SSX9-202ENST00000608568 CNTNAP4Q9C0A0 1308 aa6.24□□□□□ -1.41
SSX9-202ENST00000608568 UQCRHLA0A096LP55 91 aa6.23□□□□□ -1.41
SSX9-202ENST00000608568 PER1O15534 1290 aaPredicted RBP6.23□□□□□ -1.41
SSX9-202ENST00000608568 UQCRHP07919 91 aa6.23□□□□□ -1.41
SSX9-202ENST00000608568 MMP10P09238 476 aa6.23□□□□□ -1.41
SSX9-202ENST00000608568 GTF2F1P35269 517 aaKnown RBP eCLIP6.23□□□□□ -1.41
SSX9-202ENST00000608568 DDR1Q08345 913 aa6.23□□□□□ -1.41
SSX9-202ENST00000608568 CC2D1BQ5T0F9 858 aaKnown RBP6.23□□□□□ -1.41
SSX9-202ENST00000608568 CLEC17AQ6ZS10 378 aa6.23□□□□□ -1.41
SSX9-202ENST00000608568 PARP9Q8IXQ6 854 aa6.23□□□□□ -1.41
SSX9-202ENST00000608568 CCDC82Q8N4S0 544 aa6.23□□□□□ -1.41
SSX9-202ENST00000608568 CCDC102AQ96A19 550 aa6.23□□□□□ -1.41
SSX9-202ENST00000608568 PCMTD1Q96MG8 357 aaPredicted RBP6.23□□□□□ -1.41
SSX9-202ENST00000608568 TBC1D32Q96NH3 1257 aa6.23□□□□□ -1.41
SSX9-202ENST00000608568 CRBNQ96SW2 442 aa6.23□□□□□ -1.41
SSX9-202ENST00000608568 PANK2Q9BZ23 570 aa6.23□□□□□ -1.41
SSX9-202ENST00000608568 LGR6Q9HBX8 967 aa6.23□□□□□ -1.41
SSX9-202ENST00000608568 EMILIN3Q9NT22 766 aa6.23□□□□□ -1.41
SSX9-202ENST00000608568 TMEM51Q9NW97 253 aa6.23□□□□□ -1.41
SSX9-202ENST00000608568 BCCIPQ9P287 314 aaKnown RBP eCLIP6.23□□□□□ -1.41
SSX9-202ENST00000608568 POLR2AP24928 1970 aaKnown RBP6.23□□□□□ -1.41
SSX9-202ENST00000608568 DDX60Q8IY21 1712 aaKnown RBP6.22□□□□□ -1.41
SSX9-202ENST00000608568 CCDC66A2RUB6 948 aa6.22□□□□□ -1.41
SSX9-202ENST00000608568 ERVV-2B6SEH9 535 aa6.22□□□□□ -1.41
SSX9-202ENST00000608568 GOLGA6L22H0YM25 854 aa6.22□□□□□ -1.41
SSX9-202ENST00000608568 PTCD1O75127 700 aaKnown RBP6.22□□□□□ -1.41
SSX9-202ENST00000608568 HSP90AB1P08238 724 aaKnown RBP6.22□□□□□ -1.41
SSX9-202ENST00000608568 GYS1P13807 737 aa6.22□□□□□ -1.41
SSX9-202ENST00000608568 CRKLP46109 303 aaKnown RBP6.22□□□□□ -1.41
SSX9-202ENST00000608568 MTHFSP49914 203 aa6.22□□□□□ -1.41
SSX9-202ENST00000608568 GOLGA2Q08379 1002 aa6.22□□□□□ -1.41
SSX9-202ENST00000608568 SLC39A6Q13433 755 aa6.22□□□□□ -1.41
SSX9-202ENST00000608568 CLUAP1Q96AJ1 413 aa6.22□□□□□ -1.41
SSX9-202ENST00000608568 DCAF5Q96JK2 942 aa6.22□□□□□ -1.41
SSX9-202ENST00000608568 FEZ1Q99689 392 aa6.22□□□□□ -1.41
SSX9-202ENST00000608568 FAM13BQ9NYF5 915 aa6.22□□□□□ -1.41
SSX9-202ENST00000608568 MYH3P11055 1940 aa6.21□□□□□ -1.41
SSX9-202ENST00000608568 RNMTO43148 476 aaKnown RBP6.21□□□□□ -1.42
SSX9-202ENST00000608568 NASPP49321 788 aaPredicted RBP6.21□□□□□ -1.42
SSX9-202ENST00000608568 ATN1P54259 1190 aaPredicted RBP6.21□□□□□ -1.42
SSX9-202ENST00000608568 GABPB1Q06547 395 aaPredicted RBP6.21□□□□□ -1.42
SSX9-202ENST00000608568 MTHFSDQ2M296 383 aaKnown RBP6.21□□□□□ -1.42
SSX9-202ENST00000608568 PLEKHO1Q53GL0 409 aaPredicted RBP6.21□□□□□ -1.42
SSX9-202ENST00000608568 INTS5Q6P9B9 1019 aaKnown RBP6.21□□□□□ -1.42
SSX9-202ENST00000608568 DNAJC10Q8IXB1 793 aa6.21□□□□□ -1.42
SSX9-202ENST00000608568 PDCL2Q8N4E4 241 aa6.21□□□□□ -1.42
SSX9-202ENST00000608568 NFATC2IPQ8NCF5 419 aa6.21□□□□□ -1.42
SSX9-202ENST00000608568 ZNF526Q8TF50 670 aaPredicted RBP6.21□□□□□ -1.42
SSX9-202ENST00000608568 PDLIM2Q96JY6 352 aa6.21□□□□□ -1.42
SSX9-202ENST00000608568 TRAIPQ9BWF2 469 aa6.21□□□□□ -1.42
SSX9-202ENST00000608568 YY1AP1Q9H869 796 aa6.21□□□□□ -1.42
SSX9-202ENST00000608568 KNSTRNQ9Y448 316 aa6.21□□□□□ -1.42
SSX9-202ENST00000608568 CD2APQ9Y5K6 639 aa6.21□□□□□ -1.42
SSX9-202ENST00000608568 TRPM7Q96QT4 1865 aa6.21□□□□□ -1.42
SSX9-202ENST00000608568 SOS1Q07889 1333 aaPredicted RBP6.21□□□□□ -1.42
SSX9-202ENST00000608568 USP42Q9H9J4 1324 aaKnown RBP6.21□□□□□ -1.42
SSX9-202ENST00000608568 COL15A1P39059 1388 aa6.2□□□□□ -1.42
SSX9-202ENST00000608568 NPC1L1Q9UHC9 1359 aa6.2□□□□□ -1.42
SSX9-202ENST00000608568 CABP4P57796 275 aa6.2□□□□□ -1.42
SSX9-202ENST00000608568 ZNF445P59923 1031 aa6.2□□□□□ -1.42
SSX9-202ENST00000608568 C1QTNF8P60827 252 aa6.2□□□□□ -1.42
SSX9-202ENST00000608568 AXDND1Q5T1B0 1012 aaPredicted RBP6.2□□□□□ -1.42
SSX9-202ENST00000608568 KCTD17Q8N5Z5 321 aa6.2□□□□□ -1.42
SSX9-202ENST00000608568 FLAD1Q8NFF5 587 aa6.2□□□□□ -1.42
SSX9-202ENST00000608568 MYRIPQ8NFW9 859 aa6.2□□□□□ -1.42
SSX9-202ENST00000608568 SNX21Q969T3 373 aa6.2□□□□□ -1.42
SSX9-202ENST00000608568 SLKQ9H2G2 1235 aaPredicted RBP6.2□□□□□ -1.42
SSX9-202ENST00000608568 SLC52A2Q9HAB3 445 aa6.2□□□□□ -1.42
SSX9-202ENST00000608568 CCDC39Q9UFE4 941 aa6.2□□□□□ -1.42
SSX9-202ENST00000608568 ZBTB1Q9Y2K1 713 aa6.2□□□□□ -1.42
SSX9-202ENST00000608568 ZKSCAN5Q9Y2L8 839 aa6.2□□□□□ -1.42
SSX9-202ENST00000608568 A0A1B0GUL6 1792 aa6.2□□□□□ -1.42
SSX9-202ENST00000608568 SENP3-EIF4A1A0A087X0R7 540 aa6.19□□□□□ -1.42
SSX9-202ENST00000608568 A0A0G2JLW4 131 aa6.19□□□□□ -1.42
SSX9-202ENST00000608568 RPS6KA4O75676 772 aa6.19□□□□□ -1.42
SSX9-202ENST00000608568 DPEP1P16444 411 aa6.19□□□□□ -1.42
SSX9-202ENST00000608568 KCNA3P22001 575 aa6.19□□□□□ -1.42
SSX9-202ENST00000608568 PDE3AQ14432 1141 aa6.19□□□□□ -1.42
SSX9-202ENST00000608568 HIC1Q14526 733 aa6.19□□□□□ -1.42
SSX9-202ENST00000608568 AMOTQ4VCS5 1084 aa6.19□□□□□ -1.42
SSX9-202ENST00000608568 AKAP4Q5JQC9 854 aa6.19□□□□□ -1.42
SSX9-202ENST00000608568 C1orf141Q5JVX7 400 aa6.19□□□□□ -1.42
SSX9-202ENST00000608568 RC3H1Q5TC82 1133 aaKnown RBP6.19□□□□□ -1.42
SSX9-202ENST00000608568 TBC1D2Q9BYX2 928 aa6.19□□□□□ -1.42
SSX9-202ENST00000608568 CHMP4BQ9H444 224 aaKnown RBP6.19□□□□□ -1.42
SSX9-202ENST00000608568 BCL2L12Q9HB09 334 aa6.19□□□□□ -1.42
SSX9-202ENST00000608568 ZHX1Q9UKY1 873 aaPredicted RBP6.19□□□□□ -1.42
SSX9-202ENST00000608568 RTCBQ9Y3I0 505 aaKnown RBP6.19□□□□□ -1.42
SSX9-202ENST00000608568 R3HCC1Q9Y3T6 440 aaKnown RBP6.19□□□□□ -1.42
SSX9-202ENST00000608568 KIF3AQ9Y496 699 aa6.19□□□□□ -1.42
SSX9-202ENST00000608568 ZNF646O15015 1829 aaPredicted RBP6.19□□□□□ -1.42
SSX9-202ENST00000608568 SCN4AP35499 1836 aa6.19□□□□□ -1.42
SSX9-202ENST00000608568 COL4A1P02462 1669 aa6.19□□□□□ -1.42
SSX9-202ENST00000608568 LTBP1Q14766 1721 aa6.19□□□□□ -1.42
SSX9-202ENST00000608568 CEMIPQ8WUJ3 1361 aa6.18□□□□□ -1.42
SSX9-202ENST00000608568 ADAMTSL1Q8N6G6 1762 aa6.18□□□□□ -1.42
SSX9-202ENST00000608568 PSME4Q14997 1843 aa6.18□□□□□ -1.42
SSX9-202ENST00000608568 GRXCR2A6NFK2 248 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms