RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 CTNNA2P26232 953 aa9.62□□□□□ -0.87
CHD8-213ENST00000557364 CFAP100Q494V2 611 aa9.62□□□□□ -0.87
CHD8-213ENST00000557364 NAA16Q6N069 864 aaPredicted RBP9.62□□□□□ -0.87
CHD8-213ENST00000557364 UBA5Q9GZZ9 404 aa9.62□□□□□ -0.87
CHD8-213ENST00000557364 GOLGA6L9A6NEM1 432 aa9.61□□□□□ -0.87
CHD8-213ENST00000557364 PRPHP41219 470 aa9.61□□□□□ -0.87
CHD8-213ENST00000557364 VTI1AQ96AJ9 217 aa9.61□□□□□ -0.87
CHD8-213ENST00000557364 GCOM1H8Y6P7 765 aaPredicted RBP9.61□□□□□ -0.87
CHD8-213ENST00000557364 MYZAPP0CAP1 466 aa9.61□□□□□ -0.87
CHD8-213ENST00000557364 INCENPQ9NQS7 918 aa9.61□□□□□ -0.87
CHD8-213ENST00000557364 ATP10BO94823 1461 aa9.61□□□□□ -0.87
CHD8-213ENST00000557364 GOLGA6L10A0A0M3HER8 536 aa9.61□□□□□ -0.87
CHD8-213ENST00000557364 NEMFO60524 1076 aa9.61□□□□□ -0.87
CHD8-213ENST00000557364 YEATS4O95619 227 aa9.61□□□□□ -0.87
CHD8-213ENST00000557364 EHBP1Q8NDI1 1231 aa9.61□□□□□ -0.87
CHD8-213ENST00000557364 TBC1D5Q92609 795 aa9.61□□□□□ -0.87
CHD8-213ENST00000557364 CCDC66A2RUB6 948 aa9.61□□□□□ -0.87
CHD8-213ENST00000557364 METAP2P50579 478 aaKnown RBP eCLIP9.61□□□□□ -0.87
CHD8-213ENST00000557364 WTAPQ15007 396 aa9.61□□□□□ -0.87
CHD8-213ENST00000557364 SSH1Q8WYL5 1049 aa9.61□□□□□ -0.87
CHD8-213ENST00000557364 EMILIN1Q9Y6C2 1016 aa9.61□□□□□ -0.87
CHD8-213ENST00000557364 ALS2CR12Q96Q35 445 aa9.61□□□□□ -0.87
CHD8-213ENST00000557364 SPDYE3A6NKU9 549 aa9.61□□□□□ -0.87
CHD8-213ENST00000557364 RARSP54136 660 aaKnown RBP9.61□□□□□ -0.87
CHD8-213ENST00000557364 ARHGEF6Q15052 776 aa9.61□□□□□ -0.87
CHD8-213ENST00000557364 PRPF40BQ6NWY9 871 aaKnown RBP9.61□□□□□ -0.87
CHD8-213ENST00000557364 CKAP2LQ8IYA6 745 aa9.61□□□□□ -0.87
CHD8-213ENST00000557364 EIF6P56537 245 aaKnown RBP9.61□□□□□ -0.87
CHD8-213ENST00000557364 BICD1Q96G01 975 aa9.61□□□□□ -0.87
CHD8-213ENST00000557364 SFPQP23246 707 aaKnown RBP eCLIP9.6□□□□□ -0.87
CHD8-213ENST00000557364 CCDC117Q8IWD4 279 aaPredicted RBP9.6□□□□□ -0.87
CHD8-213ENST00000557364 KIF5CO60282 957 aa9.6□□□□□ -0.87
CHD8-213ENST00000557364 DKC1O60832 514 aaKnown RBP eCLIP9.6□□□□□ -0.878e-19■■■■■ 41.7
CHD8-213ENST00000557364 IFIT1BQ5T764 474 aaKnown RBP9.6□□□□□ -0.87
CHD8-213ENST00000557364 TSNARE1Q96NA8 513 aa9.6□□□□□ -0.87
CHD8-213ENST00000557364 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.6□□□□□ -0.877e-7■■■■□ 19.7
CHD8-213ENST00000557364 KSR2Q6VAB6 950 aa9.6□□□□□ -0.87
CHD8-213ENST00000557364 ZNF219Q9P2Y4 722 aaPredicted RBP9.6□□□□□ -0.87
CHD8-213ENST00000557364 NFKBIBQ15653 356 aa9.6□□□□□ -0.87
CHD8-213ENST00000557364 TTC6Q86TZ1 520 aa9.6□□□□□ -0.87
CHD8-213ENST00000557364 DZIP3Q86Y13 1208 aaKnown RBP9.6□□□□□ -0.87
CHD8-213ENST00000557364 CNNM3Q8NE01 707 aa9.6□□□□□ -0.87
CHD8-213ENST00000557364 DDX19AQ9NUU7 478 aaKnown RBP9.6□□□□□ -0.87
CHD8-213ENST00000557364 GRM8O00222 908 aa9.6□□□□□ -0.87
CHD8-213ENST00000557364 RNF214Q8ND24 703 aa9.6□□□□□ -0.87
CHD8-213ENST00000557364 PICK1Q9NRD5 415 aa9.6□□□□□ -0.87
CHD8-213ENST00000557364 MIS18AQ9NYP9 233 aa9.6□□□□□ -0.87
CHD8-213ENST00000557364 NPATQ14207 1427 aa9.6□□□□□ -0.87
CHD8-213ENST00000557364 PAFAH1B1P43034 410 aa9.6□□□□□ -0.87
CHD8-213ENST00000557364 BAG6P46379 1132 aa9.6□□□□□ -0.87
CHD8-213ENST00000557364 STX8Q9UNK0 236 aa9.6□□□□□ -0.87
CHD8-213ENST00000557364 YTHDC2Q9H6S0 1430 aaKnown RBP9.6□□□□□ -0.87
CHD8-213ENST00000557364 GNA11P29992 359 aa9.59□□□□□ -0.87
CHD8-213ENST00000557364 SIRT1Q96EB6 747 aa9.59□□□□□ -0.87
CHD8-213ENST00000557364 PNMA2Q9UL42 364 aa9.59□□□□□ -0.87
CHD8-213ENST00000557364 ZMYM3Q14202 1370 aa9.59□□□□□ -0.87
CHD8-213ENST00000557364 KRT13P13646 458 aa9.59□□□□□ -0.87
CHD8-213ENST00000557364 IBSPP21815 317 aaPredicted RBP9.59□□□□□ -0.87
CHD8-213ENST00000557364 PIK3C2GO75747 1445 aa9.59□□□□□ -0.87
CHD8-213ENST00000557364 PI4KAP2A4QPH2 592 aa9.59□□□□□ -0.87
CHD8-213ENST00000557364 CCDC183Q5T5S1 534 aa9.59□□□□□ -0.87
CHD8-213ENST00000557364 PI4KAP1Q8N8J0 262 aa9.59□□□□□ -0.87
CHD8-213ENST00000557364 TSPYL1Q9H0U9 437 aa9.59□□□□□ -0.87
CHD8-213ENST00000557364 TMOD4Q9NZQ9 345 aa9.59□□□□□ -0.87
CHD8-213ENST00000557364 CNBD1Q8NA66 436 aa9.59□□□□□ -0.87
CHD8-213ENST00000557364 SMARCC2Q8TAQ2 1214 aa9.59□□□□□ -0.87
CHD8-213ENST00000557364 DDX11Q96FC9 970 aa9.59□□□□□ -0.87
CHD8-213ENST00000557364 SLC5A4Q9NY91 659 aa9.59□□□□□ -0.87
CHD8-213ENST00000557364 RBM25P49756 843 aaKnown RBP9.58□□□□□ -0.88
CHD8-213ENST00000557364 GSDMDP57764 484 aa9.58□□□□□ -0.88
CHD8-213ENST00000557364 CCDC40Q4G0X9 1142 aa9.58□□□□□ -0.88
CHD8-213ENST00000557364 KCNG1Q9UIX4 513 aa9.58□□□□□ -0.88
CHD8-213ENST00000557364 MAP3K5Q99683 1374 aa9.58□□□□□ -0.88
CHD8-213ENST00000557364 CYP7A1P22680 504 aa9.58□□□□□ -0.88
CHD8-213ENST00000557364 FILIP1Q7Z7B0 1213 aa9.58□□□□□ -0.88
CHD8-213ENST00000557364 PRKCSHP14314 528 aaPredicted RBP9.58□□□□□ -0.88
CHD8-213ENST00000557364 BBXQ8WY36 941 aaPredicted RBP9.58□□□□□ -0.88
CHD8-213ENST00000557364 CTAGE1Q96RT6 745 aa9.58□□□□□ -0.88
CHD8-213ENST00000557364 EXOC1Q9NV70 894 aa9.58□□□□□ -0.88
CHD8-213ENST00000557364 NEO1Q92859 1461 aa9.58□□□□□ -0.88
CHD8-213ENST00000557364 GSTTP1A0A1W2PQM5 241 aa9.58□□□□□ -0.88
CHD8-213ENST00000557364 CCDC87Q9NVE4 849 aa9.58□□□□□ -0.88
CHD8-213ENST00000557364 DENND2AQ9ULE3 1009 aa9.58□□□□□ -0.88
CHD8-213ENST00000557364 COMMD10Q9Y6G5 202 aa9.58□□□□□ -0.88
CHD8-213ENST00000557364 LDHBP07195 334 aaKnown RBP9.58□□□□□ -0.88
CHD8-213ENST00000557364 SPAG1Q07617 926 aa9.58□□□□□ -0.88
CHD8-213ENST00000557364 CHRNA2Q15822 529 aa9.58□□□□□ -0.88
CHD8-213ENST00000557364 NEK1Q96PY6 1258 aa9.58□□□□□ -0.88
CHD8-213ENST00000557364 ARHGEF10LQ9HCE6 1279 aa9.58□□□□□ -0.88
CHD8-213ENST00000557364 HAUS2Q9NVX0 235 aa9.58□□□□□ -0.88
CHD8-213ENST00000557364 POTEB2H3BUK9 544 aa9.58□□□□□ -0.88
CHD8-213ENST00000557364 MTIF2P46199 727 aaKnown RBP9.58□□□□□ -0.88
CHD8-213ENST00000557364 PDCL2Q8N4E4 241 aa9.58□□□□□ -0.88
CHD8-213ENST00000557364 RRP36Q96EU6 259 aaKnown RBP9.58□□□□□ -0.88
CHD8-213ENST00000557364 CCDC8Q9H0W5 538 aaPredicted RBP9.58□□□□□ -0.88
CHD8-213ENST00000557364 MYO5CQ9NQX4 1742 aa9.57□□□□□ -0.88
CHD8-213ENST00000557364 CFAP43Q8NDM7 1665 aa9.57□□□□□ -0.88
CHD8-213ENST00000557364 TTC41PQ6P2S7 1318 aa9.57□□□□□ -0.88
CHD8-213ENST00000557364 CCDC171Q6TFL3 1326 aa9.57□□□□□ -0.88
CHD8-213ENST00000557364 KCNA6P17658 529 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms