RNA–Protein interactions for RNA: ENST00000553942.5

MARK3-207, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-207ENST00000553942 C4AP0C0L4 1744 aa11.31□□□□□ -0.6
MARK3-207ENST00000553942 UBR3Q6ZT12 1888 aa11.31□□□□□ -0.6
MARK3-207ENST00000553942 NPHP1O15259 732 aa11.31□□□□□ -0.6
MARK3-207ENST00000553942 GTF2E1P29083 439 aaPredicted RBP11.31□□□□□ -0.6
MARK3-207ENST00000553942 LRRC24Q50LG9 513 aa11.31□□□□□ -0.6
MARK3-207ENST00000553942 RPAP2Q8IXW5 612 aaPredicted RBP11.31□□□□□ -0.6
MARK3-207ENST00000553942 ZBTB38Q8NAP3 1195 aaPredicted RBP11.31□□□□□ -0.6
MARK3-207ENST00000553942 SETDB2Q96T68 719 aa11.31□□□□□ -0.6
MARK3-207ENST00000553942 RREB1Q92766 1687 aa11.31□□□□□ -0.6
MARK3-207ENST00000553942 UTYO14607 1347 aa11.31□□□□□ -0.6
MARK3-207ENST00000553942 ABCC12Q96J65 1359 aa11.31□□□□□ -0.6
MARK3-207ENST00000553942 DDR1Q08345 913 aa11.3□□□□□ -0.6
MARK3-207ENST00000553942 SLC15A2Q16348 729 aa11.3□□□□□ -0.6
MARK3-207ENST00000553942 UPF1Q92900 1129 aaKnown RBP eCLIP11.3□□□□□ -0.6
MARK3-207ENST00000553942 NAP1L5Q96NT1 182 aaPredicted RBP11.3□□□□□ -0.6
MARK3-207ENST00000553942 NBPF5PQ86XG9 351 aaPredicted RBP11.3□□□□□ -0.6
MARK3-207ENST00000553942 SMC5Q8IY18 1101 aa11.3□□□□□ -0.6
MARK3-207ENST00000553942 SSH3Q8TE77 659 aa11.3□□□□□ -0.6
MARK3-207ENST00000553942 UTP14AQ9BVJ6 771 aaKnown RBP11.3□□□□□ -0.6
MARK3-207ENST00000553942 DCTPP1Q9H773 170 aa11.3□□□□□ -0.6
MARK3-207ENST00000553942 CARMIL3Q8ND23 1372 aa11.3□□□□□ -0.6
MARK3-207ENST00000553942 TAF1P21675 1872 aa11.3□□□□□ -0.6
MARK3-207ENST00000553942 PCCAP05165 728 aaPredicted RBP11.29□□□□□ -0.6
MARK3-207ENST00000553942 OS9Q13438 667 aaPredicted RBP11.29□□□□□ -0.6
MARK3-207ENST00000553942 TUBGCP6Q96RT7 1819 aa11.29□□□□□ -0.6
MARK3-207ENST00000553942 RFX5P48382 616 aaPredicted RBP11.29□□□□□ -0.6
MARK3-207ENST00000553942 PTPN12Q05209 780 aaKnown RBP11.29□□□□□ -0.6
MARK3-207ENST00000553942 TRIM28Q13263 835 aaKnown RBP11.29□□□□□ -0.6
MARK3-207ENST00000553942 POLA2Q14181 598 aa11.29□□□□□ -0.6
MARK3-207ENST00000553942 CHD1LQ86WJ1 897 aa11.29□□□□□ -0.6
MARK3-207ENST00000553942 HELBQ8NG08 1087 aaPredicted RBP11.29□□□□□ -0.6
MARK3-207ENST00000553942 TTLL11Q8NHH1 800 aa11.29□□□□□ -0.6
MARK3-207ENST00000553942 N4BP2Q86UW6 1770 aaPredicted RBP11.28□□□□□ -0.6
MARK3-207ENST00000553942 SH3TC1Q8TE82 1336 aa11.28□□□□□ -0.6
MARK3-207ENST00000553942 SASH1O94885 1247 aa11.28□□□□□ -0.6
MARK3-207ENST00000553942 ZBTB7AO95365 584 aa11.28□□□□□ -0.6
MARK3-207ENST00000553942 SSFA2P28290 1259 aa11.28□□□□□ -0.6
MARK3-207ENST00000553942 R3HDM1Q15032 1099 aaKnown RBP11.28□□□□□ -0.6
MARK3-207ENST00000553942 ZNF652Q9Y2D9 606 aa11.28□□□□□ -0.6
MARK3-207ENST00000553942 ITGA6P23229 1130 aa11.28□□□□□ -0.6
MARK3-207ENST00000553942 NUCB1Q02818 461 aa11.28□□□□□ -0.6
MARK3-207ENST00000553942 HSP90AB3PQ58FF7 597 aa11.28□□□□□ -0.6
MARK3-207ENST00000553942 TLR7Q9NYK1 1049 aaKnown RBP11.28□□□□□ -0.6
MARK3-207ENST00000553942 NDUFB9Q9Y6M9 179 aa11.28□□□□□ -0.6
MARK3-207ENST00000553942 CICQ96RK0 1608 aaPredicted RBP11.27□□□□□ -0.6
MARK3-207ENST00000553942 ZNF831Q5JPB2 1677 aa11.27□□□□□ -0.61
MARK3-207ENST00000553942 MAP4K4O95819 1239 aaPredicted RBP11.27□□□□□ -0.61
MARK3-207ENST00000553942 MMP10P09238 476 aa11.27□□□□□ -0.61
MARK3-207ENST00000553942 PDE4CQ08493 712 aa11.27□□□□□ -0.61
MARK3-207ENST00000553942 PDCL3Q9H2J4 239 aa11.27□□□□□ -0.61
MARK3-207ENST00000553942 SERPINB2P05120 415 aa11.26□□□□□ -0.61
MARK3-207ENST00000553942 CTSWP56202 376 aa11.26□□□□□ -0.61
MARK3-207ENST00000553942 RABL6Q3YEC7 729 aaPredicted RBP11.26□□□□□ -0.61
MARK3-207ENST00000553942 CLEC4GQ6UXB4 293 aa11.26□□□□□ -0.61
MARK3-207ENST00000553942 CCDC8Q9H0W5 538 aaPredicted RBP11.26□□□□□ -0.61
MARK3-207ENST00000553942 CHMP4BQ9H444 224 aaKnown RBP11.26□□□□□ -0.61
MARK3-207ENST00000553942 STK32BQ9NY57 414 aa11.26□□□□□ -0.61
MARK3-207ENST00000553942 ATF5Q9Y2D1 282 aaPredicted RBP11.26□□□□□ -0.61
MARK3-207ENST00000553942 ANKRD36CQ5JPF3 1778 aa11.26□□□□□ -0.61
MARK3-207ENST00000553942 BCORQ6W2J9 1755 aa11.26□□□□□ -0.61
MARK3-207ENST00000553942 HMMRO75330 724 aa11.26□□□□□ -0.61
MARK3-207ENST00000553942 TFCP2Q12800 502 aa11.26□□□□□ -0.61
MARK3-207ENST00000553942 PRR5LQ6MZQ0 368 aa11.26□□□□□ -0.61
MARK3-207ENST00000553942 TAF5LO75529 589 aa11.25□□□□□ -0.61
MARK3-207ENST00000553942 TM4SF1P30408 202 aa11.25□□□□□ -0.61
MARK3-207ENST00000553942 OLFM4Q6UX06 510 aa11.25□□□□□ -0.61
MARK3-207ENST00000553942 RHPN1Q8TCX5 695 aa11.25□□□□□ -0.61
MARK3-207ENST00000553942 SCN7AQ01118 1682 aa11.25□□□□□ -0.61
MARK3-207ENST00000553942 POLRMTO00411 1230 aaKnown RBP11.25□□□□□ -0.61
MARK3-207ENST00000553942 PDE8AO60658 829 aa11.25□□□□□ -0.61
MARK3-207ENST00000553942 TPM2P07951 284 aa11.25□□□□□ -0.61
MARK3-207ENST00000553942 TIMM10P62072 90 aa11.25□□□□□ -0.61
MARK3-207ENST00000553942 MTX1Q13505 466 aa11.25□□□□□ -0.61
MARK3-207ENST00000553942 CCDC57Q2TAC2 916 aa11.25□□□□□ -0.61
MARK3-207ENST00000553942 CELF1Q92879 486 aaKnown RBP11.25□□□□□ -0.61
MARK3-207ENST00000553942 PRDM4Q9UKN5 801 aa11.25□□□□□ -0.61
MARK3-207ENST00000553942 IBTKQ9P2D0 1353 aaPredicted RBP11.25□□□□□ -0.61
MARK3-207ENST00000553942 PARP10Q53GL7 1025 aa11.24□□□□□ -0.61
MARK3-207ENST00000553942 ATG9AQ7Z3C6 839 aa11.24□□□□□ -0.61
MARK3-207ENST00000553942 CNBD1Q8NA66 436 aa11.24□□□□□ -0.61
MARK3-207ENST00000553942 EAF2Q96CJ1 260 aaPredicted RBP11.24□□□□□ -0.61
MARK3-207ENST00000553942 GCC1Q96CN9 775 aa11.24□□□□□ -0.61
MARK3-207ENST00000553942 LRRCC1Q9C099 1032 aa11.24□□□□□ -0.61
MARK3-207ENST00000553942 CSF1RP07333 972 aa11.24□□□□□ -0.61
MARK3-207ENST00000553942 TAF7LQ5H9L4 462 aa11.24□□□□□ -0.61
MARK3-207ENST00000553942 TPTE2Q6XPS3 522 aa11.24□□□□□ -0.61
MARK3-207ENST00000553942 ZNF219Q9P2Y4 722 aaPredicted RBP11.24□□□□□ -0.61
MARK3-207ENST00000553942 FRAT2O75474 233 aaPredicted RBP11.23□□□□□ -0.61
MARK3-207ENST00000553942 G3BP1Q13283 466 aaKnown RBP eCLIP11.23□□□□□ -0.61
MARK3-207ENST00000553942 IFIT5Q13325 482 aaKnown RBP11.23□□□□□ -0.61
MARK3-207ENST00000553942 LDHAL6AQ6ZMR3 332 aa11.23□□□□□ -0.61
MARK3-207ENST00000553942 A0A0U1RQG5 324 aaPredicted RBP11.23□□□□□ -0.61
MARK3-207ENST00000553942 PLEKHM2Q8IWE5 1019 aa11.23□□□□□ -0.61
MARK3-207ENST00000553942 PPP1R1BQ9UD71 204 aaPredicted RBP11.23□□□□□ -0.61
MARK3-207ENST00000553942 TNRC6CQ9HCJ0 1690 aaKnown RBP11.22□□□□□ -0.61
MARK3-207ENST00000553942 CDHR2Q9BYE9 1310 aa11.22□□□□□ -0.61
MARK3-207ENST00000553942 DDX60Q8IY21 1712 aaKnown RBP11.22□□□□□ -0.61
MARK3-207ENST00000553942 CHGBP05060 677 aa11.22□□□□□ -0.61
MARK3-207ENST00000553942 AACSQ86V21 672 aa11.22□□□□□ -0.61
MARK3-207ENST00000553942 KLHL34Q8N239 644 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms