RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 OXER1Q8TDS5 423 aa9.42□□□□□ -0.9
TRIO-213ENST00000509354 PTCD2Q8WV60 388 aaKnown RBP9.42□□□□□ -0.9
TRIO-213ENST00000509354 LAS1LQ9Y4W2 734 aaKnown RBP9.42□□□□□ -0.9
TRIO-213ENST00000509354 POTEB2H3BUK9 544 aa9.41□□□□□ -0.9
TRIO-213ENST00000509354 HLFQ16534 295 aa9.41□□□□□ -0.9
TRIO-213ENST00000509354 PROSER3Q2NL68 480 aa9.41□□□□□ -0.9
TRIO-213ENST00000509354 NPM2Q86SE8 214 aaKnown RBP9.41□□□□□ -0.9
TRIO-213ENST00000509354 NECTIN2Q92692 538 aa9.41□□□□□ -0.9
TRIO-213ENST00000509354 ZSWIM6Q9HCJ5 1215 aa9.41□□□□□ -0.9
TRIO-213ENST00000509354 TAF1P21675 1872 aa9.4□□□□□ -0.9
TRIO-213ENST00000509354 ABCC12Q96J65 1359 aa9.4□□□□□ -0.9
TRIO-213ENST00000509354 IL16Q14005 1332 aa9.4□□□□□ -0.9
TRIO-213ENST00000509354 FAM177BA6PVY3 158 aa9.4□□□□□ -0.9
TRIO-213ENST00000509354 E9PSI1 815 aa9.4□□□□□ -0.9
TRIO-213ENST00000509354 EIF2S2P20042 333 aaKnown RBP9.4□□□□□ -0.9
TRIO-213ENST00000509354 DALRD3Q5D0E6 543 aaKnown RBP9.4□□□□□ -0.9
TRIO-213ENST00000509354 LHX8Q68G74 356 aa9.4□□□□□ -0.9
TRIO-213ENST00000509354 ARHGAP27Q6ZUM4 889 aa9.4□□□□□ -0.9
TRIO-213ENST00000509354 C2CD5Q86YS7 1000 aa9.4□□□□□ -0.9
TRIO-213ENST00000509354 CNBD1Q8NA66 436 aa9.4□□□□□ -0.9
TRIO-213ENST00000509354 ZNF526Q8TF50 670 aaPredicted RBP9.4□□□□□ -0.9
TRIO-213ENST00000509354 CDCA7LQ96GN5 454 aa9.4□□□□□ -0.9
TRIO-213ENST00000509354 SETDB2Q96T68 719 aa9.4□□□□□ -0.9
TRIO-213ENST00000509354 PIM2Q9P1W9 311 aa9.4□□□□□ -0.9
TRIO-213ENST00000509354 DDX60Q8IY21 1712 aaKnown RBP9.39□□□□□ -0.91
TRIO-213ENST00000509354 MAP3K15Q6ZN16 1313 aa9.39□□□□□ -0.91
TRIO-213ENST00000509354 CHL1O00533 1208 aa9.39□□□□□ -0.91
TRIO-213ENST00000509354 POTEJP0CG39 1038 aa9.39□□□□□ -0.91
TRIO-213ENST00000509354 RASSF7Q02833 373 aa9.39□□□□□ -0.91
TRIO-213ENST00000509354 LRP10Q7Z4F1 713 aa9.39□□□□□ -0.91
TRIO-213ENST00000509354 ZBTB3Q9H5J0 574 aa9.39□□□□□ -0.91
TRIO-213ENST00000509354 NIP7Q9Y221 180 aaKnown RBP eCLIP9.39□□□□□ -0.91
TRIO-213ENST00000509354 ZNF652Q9Y2D9 606 aa9.39□□□□□ -0.91
TRIO-213ENST00000509354 UBN2Q6ZU65 1347 aa9.38□□□□□ -0.91
TRIO-213ENST00000509354 TESPA1A2RU30 521 aaPredicted RBP9.38□□□□□ -0.91
TRIO-213ENST00000509354 SEMA3EO15041 775 aa9.38□□□□□ -0.91
TRIO-213ENST00000509354 NPHP1O15259 732 aa9.38□□□□□ -0.91
TRIO-213ENST00000509354 GPTP24298 496 aa9.38□□□□□ -0.91
TRIO-213ENST00000509354 KIF6Q6ZMV9 814 aa9.38□□□□□ -0.91
TRIO-213ENST00000509354 NBPF5PQ86XG9 351 aaPredicted RBP9.38□□□□□ -0.91
TRIO-213ENST00000509354 BABAM1Q9NWV8 329 aa9.38□□□□□ -0.91
TRIO-213ENST00000509354 ERBB4Q15303 1308 aa9.37□□□□□ -0.91
TRIO-213ENST00000509354 H0YIN7 160 aa9.37□□□□□ -0.91
TRIO-213ENST00000509354 ST5P78524 1137 aa9.37□□□□□ -0.91
TRIO-213ENST00000509354 CLEC4GQ6UXB4 293 aa9.37□□□□□ -0.91
TRIO-213ENST00000509354 BRIP1Q9BX63 1249 aa9.37□□□□□ -0.91
TRIO-213ENST00000509354 MBIPQ9NS73 344 aa9.37□□□□□ -0.91
TRIO-213ENST00000509354 CACNA1FO60840 1977 aa9.36□□□□□ -0.91
TRIO-213ENST00000509354 EVI5O60447 810 aa9.36□□□□□ -0.91
TRIO-213ENST00000509354 PRELPP51888 382 aa9.36□□□□□ -0.91
TRIO-213ENST00000509354 C9orf131Q5VYM1 1079 aa9.36□□□□□ -0.91
TRIO-213ENST00000509354 NUTM1Q86Y26 1132 aa9.36□□□□□ -0.91
TRIO-213ENST00000509354 TTLL6Q8N841 843 aa9.36□□□□□ -0.91
TRIO-213ENST00000509354 ZNF622Q969S3 477 aaKnown RBP eCLIP9.36□□□□□ -0.91
TRIO-213ENST00000509354 CHPF2Q9P2E5 772 aa9.36□□□□□ -0.91
TRIO-213ENST00000509354 RCAN3Q9UKA8 241 aa9.36□□□□□ -0.91
TRIO-213ENST00000509354 PCDHGA4Q9Y5G9 962 aa9.36□□□□□ -0.91
TRIO-213ENST00000509354 SPEF2Q9C093 1822 aa9.35□□□□□ -0.91
TRIO-213ENST00000509354 ERVV-1B6SEH8 477 aa9.35□□□□□ -0.91
TRIO-213ENST00000509354 NFKBIEO00221 500 aa9.35□□□□□ -0.91
TRIO-213ENST00000509354 CT47B1P0C2W7 299 aaPredicted RBP9.35□□□□□ -0.91
TRIO-213ENST00000509354 ZNF853P0CG23 659 aa9.35□□□□□ -0.91
TRIO-213ENST00000509354 PDE6BP35913 854 aa9.35□□□□□ -0.91
TRIO-213ENST00000509354 AIMP1Q12904 312 aaKnown RBP9.35□□□□□ -0.91
TRIO-213ENST00000509354 HDGFL1Q5TGJ6 251 aa9.35□□□□□ -0.91
TRIO-213ENST00000509354 SLC51AQ86UW1 340 aa9.35□□□□□ -0.91
TRIO-213ENST00000509354 XAGE3Q8WTP9 111 aa9.35□□□□□ -0.91
TRIO-213ENST00000509354 ZNF428Q96B54 188 aa9.35□□□□□ -0.91
TRIO-213ENST00000509354 IFT57Q9NWB7 429 aa9.35□□□□□ -0.91
TRIO-213ENST00000509354 RNF181Q9P0P0 153 aa9.35□□□□□ -0.91
TRIO-213ENST00000509354 COL4A1P02462 1669 aa9.35□□□□□ -0.91
TRIO-213ENST00000509354 IBTKQ9P2D0 1353 aaPredicted RBP9.35□□□□□ -0.91
TRIO-213ENST00000509354 MYH3P11055 1940 aa9.35□□□□□ -0.91
TRIO-213ENST00000509354 RIC1Q4ADV7 1423 aa9.34□□□□□ -0.91
TRIO-213ENST00000509354 C21orf2O43822 256 aa9.34□□□□□ -0.91
TRIO-213ENST00000509354 NTSR2O95665 410 aa9.34□□□□□ -0.91
TRIO-213ENST00000509354 SRGNP10124 158 aa9.34□□□□□ -0.91
TRIO-213ENST00000509354 RRP1P56182 461 aaKnown RBP9.34□□□□□ -0.91
TRIO-213ENST00000509354 ERFEQ4G0M1 354 aa9.34□□□□□ -0.91
TRIO-213ENST00000509354 PRPF40BQ6NWY9 871 aaKnown RBP9.34□□□□□ -0.91
TRIO-213ENST00000509354 GIGYF2Q6Y7W6 1299 aaKnown RBP9.34□□□□□ -0.91
TRIO-213ENST00000509354 TSR2Q969E8 191 aaKnown RBP9.34□□□□□ -0.91
TRIO-213ENST00000509354 GPBP1L1Q9HC44 474 aaPredicted RBP9.34□□□□□ -0.91
TRIO-213ENST00000509354 DDX21Q9NR30 783 aaKnown RBP eCLIP9.34□□□□□ -0.91
TRIO-213ENST00000509354 ELL2O00472 640 aaPredicted RBP9.33□□□□□ -0.92
TRIO-213ENST00000509354 GNAI1P63096 354 aa9.33□□□□□ -0.92
TRIO-213ENST00000509354 SUSD4Q5VX71 490 aa9.33□□□□□ -0.92
TRIO-213ENST00000509354 STYK1Q6J9G0 422 aa9.33□□□□□ -0.92
TRIO-213ENST00000509354 OLFM4Q6UX06 510 aa9.33□□□□□ -0.92
TRIO-213ENST00000509354 COPS6Q7L5N1 327 aa9.33□□□□□ -0.92
TRIO-213ENST00000509354 ZNF34Q8IZ26 560 aa9.33□□□□□ -0.92
TRIO-213ENST00000509354 C8orf58Q8NAV2 365 aa9.33□□□□□ -0.92
TRIO-213ENST00000509354 SALL2Q9Y467 1007 aaPredicted RBP9.33□□□□□ -0.92
TRIO-213ENST00000509354 LRRC37AA6NMS7 1700 aa9.33□□□□□ -0.92
TRIO-213ENST00000509354 NEFLP07196 543 aa9.32□□□□□ -0.92
TRIO-213ENST00000509354 HOXB7P09629 217 aa9.32□□□□□ -0.92
TRIO-213ENST00000509354 TPTE2Q6XPS3 522 aa9.32□□□□□ -0.92
TRIO-213ENST00000509354 SYNE4Q8N205 404 aa9.32□□□□□ -0.92
TRIO-213ENST00000509354 TSPYL6Q8N831 410 aa9.32□□□□□ -0.92
TRIO-213ENST00000509354 MASTLQ96GX5 879 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms