RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 AEBP2Q6ZN18 517 aaPredicted RBP20■□□□□ 0.79
TRIO-213ENST00000509354 CHIC1Q5VXU3 224 aa19.85■□□□□ 0.77
TRIO-213ENST00000509354 NISCHQ9Y2I1 1504 aa17.82■□□□□ 0.44
TRIO-213ENST00000509354 PHF23Q9BUL5 403 aaPredicted RBP17.32■□□□□ 0.36
TRIO-213ENST00000509354 SENP3Q9H4L4 574 aaPredicted RBP17.2■□□□□ 0.34
TRIO-213ENST00000509354 PLPPR3Q6T4P5 718 aa16.3■□□□□ 0.2
TRIO-213ENST00000509354 CCDC180Q9P1Z9 1646 aa15.97■□□□□ 0.15
TRIO-213ENST00000509354 FOXD1Q16676 465 aa15.76■□□□□ 0.11
TRIO-213ENST00000509354 ABCC9O60706 1549 aa15.71■□□□□ 0.11
TRIO-213ENST00000509354 ADRA2BP18089 450 aa15.26■□□□□ 0.03
TRIO-213ENST00000509354 PPP6R1Q9UPN7 881 aa15.2■□□□□ 0.02
TRIO-213ENST00000509354 PIAS4Q8N2W9 510 aaPredicted RBP15.04■□□□□ -0
TRIO-213ENST00000509354 RB1CC1Q8TDY2 1594 aa15.03■□□□□ -0
TRIO-213ENST00000509354 NACADO15069 1562 aa14.97□□□□□ -0.01
TRIO-213ENST00000509354 UNC13AQ9UPW8 1703 aa14.86□□□□□ -0.03
TRIO-213ENST00000509354 ZCCHC6Q5VYS8 1495 aaKnown RBP14.85□□□□□ -0.03
TRIO-213ENST00000509354 DCAF8L2P0C7V8 631 aa14.85□□□□□ -0.03
TRIO-213ENST00000509354 MYO15BQ96JP2 1530 aa14.8□□□□□ -0.04
TRIO-213ENST00000509354 DCAF1Q9Y4B6 1507 aa14.71□□□□□ -0.05
TRIO-213ENST00000509354 MSH5O43196 834 aa14.68□□□□□ -0.06
TRIO-213ENST00000509354 BICRAQ9NZM4 1560 aa14.65□□□□□ -0.06
TRIO-213ENST00000509354 PABPN1Q86U42 306 aaKnown RBP eCLIP14.6□□□□□ -0.07
TRIO-213ENST00000509354 SCRIBQ14160 1630 aa14.59□□□□□ -0.07
TRIO-213ENST00000509354 DNAJC5BQ9UF47 199 aa14.49□□□□□ -0.09
TRIO-213ENST00000509354 SHROOM4Q9ULL8 1493 aa14.38□□□□□ -0.11
TRIO-213ENST00000509354 PPP4R3CPQ6ZMV5 832 aa14.3□□□□□ -0.12
TRIO-213ENST00000509354 SCAF1Q9H7N4 1312 aaKnown RBP14.24□□□□□ -0.13
TRIO-213ENST00000509354 EIF4G1Q04637 1599 aaKnown RBP14.24□□□□□ -0.13
TRIO-213ENST00000509354 CC2D2AQ9P2K1 1620 aa14.23□□□□□ -0.13
TRIO-213ENST00000509354 NCBP3Q53F19 620 aaKnown RBP14.13□□□□□ -0.15
TRIO-213ENST00000509354 CECR2Q9BXF3 1484 aa14.09□□□□□ -0.15
TRIO-213ENST00000509354 KCNA4P22459 653 aa14.08□□□□□ -0.16
TRIO-213ENST00000509354 CNKSR2Q8WXI2 1034 aa13.92□□□□□ -0.18
TRIO-213ENST00000509354 SMARCA4P51532 1647 aa13.91□□□□□ -0.18
TRIO-213ENST00000509354 BAZ1AQ9NRL2 1556 aaPredicted RBP13.82□□□□□ -0.2
TRIO-213ENST00000509354 ATAD2BQ9ULI0 1458 aa13.8□□□□□ -0.2
TRIO-213ENST00000509354 SMARCA2P51531 1590 aa13.79□□□□□ -0.2
TRIO-213ENST00000509354 NCAPD3P42695 1498 aa13.77□□□□□ -0.21
TRIO-213ENST00000509354 MROH2BQ7Z745 1585 aa13.77□□□□□ -0.21
TRIO-213ENST00000509354 HMGXB3Q12766 1538 aa13.76□□□□□ -0.21
TRIO-213ENST00000509354 MAPK8IP2Q13387 824 aaPredicted RBP13.74□□□□□ -0.21
TRIO-213ENST00000509354 PEG3Q9GZU2 1588 aa13.74□□□□□ -0.21
TRIO-213ENST00000509354 NPM3O75607 178 aaKnown RBP13.73□□□□□ -0.21
TRIO-213ENST00000509354 BAZ1BQ9UIG0 1483 aaKnown RBP13.69□□□□□ -0.22
TRIO-213ENST00000509354 DMRT2Q9Y5R5 561 aa13.68□□□□□ -0.22
TRIO-213ENST00000509354 WIZO95785 1651 aa13.66□□□□□ -0.22
TRIO-213ENST00000509354 RNF216Q9NWF9 866 aaPredicted RBP13.6□□□□□ -0.23
TRIO-213ENST00000509354 NESP48681 1621 aa13.58□□□□□ -0.24
TRIO-213ENST00000509354 SLC4A1APQ9BWU0 796 aaKnown RBP13.56□□□□□ -0.24
TRIO-213ENST00000509354 ERCC6Q03468 1493 aa13.52□□□□□ -0.25
TRIO-213ENST00000509354 RSF1Q96T23 1441 aaPredicted RBP13.51□□□□□ -0.25
TRIO-213ENST00000509354 KIF21AQ7Z4S6 1674 aa13.5□□□□□ -0.25
TRIO-213ENST00000509354 LAMC3Q9Y6N6 1575 aa13.49□□□□□ -0.25
TRIO-213ENST00000509354 TOP2AP11388 1531 aaKnown RBP13.46□□□□□ -0.25
TRIO-213ENST00000509354 HOXD11P31277 338 aaPredicted RBP13.45□□□□□ -0.26
TRIO-213ENST00000509354 THOC2Q8NI27 1593 aaKnown RBP13.45□□□□□ -0.26
TRIO-213ENST00000509354 CUX2O14529 1486 aa13.4□□□□□ -0.26
TRIO-213ENST00000509354 CADPSQ9ULU8 1353 aa13.35□□□□□ -0.27
TRIO-213ENST00000509354 PRDM2Q13029 1718 aa13.35□□□□□ -0.27
TRIO-213ENST00000509354 PDS5BQ9NTI5 1447 aa13.32□□□□□ -0.28
TRIO-213ENST00000509354 EHMT2Q96KQ7 1210 aa13.32□□□□□ -0.28
TRIO-213ENST00000509354 CFTRP13569 1480 aa13.28□□□□□ -0.28
TRIO-213ENST00000509354 CCDC88BA6NC98 1476 aa13.27□□□□□ -0.29
TRIO-213ENST00000509354 MRC2Q9UBG0 1479 aa13.27□□□□□ -0.29
TRIO-213ENST00000509354 FANCD2Q9BXW9 1451 aa13.26□□□□□ -0.29
TRIO-213ENST00000509354 CEP164Q9UPV0 1460 aa13.26□□□□□ -0.29
TRIO-213ENST00000509354 WDR62O43379 1518 aa13.25□□□□□ -0.29
TRIO-213ENST00000509354 URB2Q14146 1524 aaKnown RBP13.18□□□□□ -0.3
TRIO-213ENST00000509354 DCAF8L1A6NGE4 600 aa13.15□□□□□ -0.3
TRIO-213ENST00000509354 DNAJC5Q9H3Z4 198 aa13.07□□□□□ -0.32
TRIO-213ENST00000509354 TOPBP1Q92547 1522 aa13.05□□□□□ -0.32
TRIO-213ENST00000509354 SUPT5HO00267 1087 aaKnown RBP13.05□□□□□ -0.32
TRIO-213ENST00000509354 FOXD4L1Q9NU39 408 aa13.05□□□□□ -0.32
TRIO-213ENST00000509354 DNMBPQ6XZF7 1577 aa13.04□□□□□ -0.32
TRIO-213ENST00000509354 CSRNP3Q8WYN3 585 aa13□□□□□ -0.33
TRIO-213ENST00000509354 ZNF608Q9ULD9 1512 aaPredicted RBP12.97□□□□□ -0.33
TRIO-213ENST00000509354 TARBP1Q13395 1621 aaKnown RBP12.96□□□□□ -0.33
TRIO-213ENST00000509354 EIF4G3O43432 1585 aaKnown RBP12.96□□□□□ -0.33
TRIO-213ENST00000509354 ABCC8Q09428 1581 aa12.96□□□□□ -0.33
TRIO-213ENST00000509354 IFT140Q96RY7 1462 aa12.96□□□□□ -0.34
TRIO-213ENST00000509354 CUX1P39880 1505 aa12.93□□□□□ -0.34
TRIO-213ENST00000509354 POLA1P09884 1462 aaPredicted RBP12.93□□□□□ -0.34
TRIO-213ENST00000509354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.91□□□□□ -0.343e-7■□□□□ 11.1
TRIO-213ENST00000509354 POTEDQ86YR6 584 aa12.9□□□□□ -0.34
TRIO-213ENST00000509354 WDR97A6NE52 1622 aa12.89□□□□□ -0.35
TRIO-213ENST00000509354 FGD5Q6ZNL6 1462 aa12.89□□□□□ -0.35
TRIO-213ENST00000509354 ZBTB22O15209 634 aa12.88□□□□□ -0.35
TRIO-213ENST00000509354 RAD54L2Q9Y4B4 1467 aa12.88□□□□□ -0.35
TRIO-213ENST00000509354 CHD1O14646 1710 aa12.87□□□□□ -0.35
TRIO-213ENST00000509354 SLC4A2P04920 1241 aa12.85□□□□□ -0.35
TRIO-213ENST00000509354 AQRO60306 1485 aaKnown RBP eCLIP12.84□□□□□ -0.353e-6■□□□□ 10.2
TRIO-213ENST00000509354 BIVM-ERCC5R4GMW8 1640 aa12.82□□□□□ -0.36
TRIO-213ENST00000509354 MYCNP04198 464 aaPredicted RBP12.82□□□□□ -0.36
TRIO-213ENST00000509354 SYNJ1O43426 1573 aa12.81□□□□□ -0.36
TRIO-213ENST00000509354 SOGA1O94964 1423 aa12.81□□□□□ -0.36
TRIO-213ENST00000509354 PBRM1Q86U86 1689 aa12.81□□□□□ -0.36
TRIO-213ENST00000509354 TOP2BQ02880 1626 aa12.78□□□□□ -0.36
TRIO-213ENST00000509354 TDRD9Q8NDG6 1382 aaKnown RBP12.78□□□□□ -0.36
TRIO-213ENST00000509354 ABCA5Q8WWZ7 1642 aa12.77□□□□□ -0.37
TRIO-213ENST00000509354 SNAPC4Q5SXM2 1469 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms