RNA–Protein interactions for RNA: ENST00000479239.1

LRRC47-203, Transcript of leucine rich repeat containing 47, humanhuman

TSL 3

Gene LRRC47, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-203ENST00000479239 VIRMAQ69YN4 1812 aaKnown RBP7.6□□□□□ -1.19
LRRC47-203ENST00000479239 LOC102724428A0A0B4J2F2 783 aa7.6□□□□□ -1.19
LRRC47-203ENST00000479239 ATP5J2-PTCD1G3V325 749 aa7.6□□□□□ -1.19
LRRC47-203ENST00000479239 APBB1O00213 710 aa7.6□□□□□ -1.19
LRRC47-203ENST00000479239 ATP6V1AP38606 617 aa7.6□□□□□ -1.19
LRRC47-203ENST00000479239 SIK1P57059 783 aa7.6□□□□□ -1.19
LRRC47-203ENST00000479239 FAM161AQ3B820 660 aa7.6□□□□□ -1.19
LRRC47-203ENST00000479239 PPP1R42Q7Z4L9 355 aa7.6□□□□□ -1.19
LRRC47-203ENST00000479239 NPM2Q86SE8 214 aaKnown RBP7.6□□□□□ -1.19
LRRC47-203ENST00000479239 BACH2Q9BYV9 841 aa7.6□□□□□ -1.19
LRRC47-203ENST00000479239 STK32BQ9NY57 414 aa7.6□□□□□ -1.19
LRRC47-203ENST00000479239 WNK3Q9BYP7 1800 aa7.59□□□□□ -1.19
LRRC47-203ENST00000479239 UTYO14607 1347 aa7.59□□□□□ -1.19
LRRC47-203ENST00000479239 CACNA1FO60840 1977 aa7.59□□□□□ -1.19
LRRC47-203ENST00000479239 PNMA6EA0A0J9YXQ4 647 aa7.59□□□□□ -1.19
LRRC47-203ENST00000479239 DPYSL4O14531 572 aa7.59□□□□□ -1.19
LRRC47-203ENST00000479239 SRGAP3O43295 1099 aa7.59□□□□□ -1.19
LRRC47-203ENST00000479239 YBX3P16989 372 aaKnown RBP eCLIP7.59□□□□□ -1.19
LRRC47-203ENST00000479239 KRI1Q8N9T8 703 aaKnown RBP7.59□□□□□ -1.19
LRRC47-203ENST00000479239 SSH3Q8TE77 659 aa7.59□□□□□ -1.19
LRRC47-203ENST00000479239 AK7Q96M32 723 aa7.59□□□□□ -1.19
LRRC47-203ENST00000479239 BCL11AQ9H165 835 aa7.59□□□□□ -1.19
LRRC47-203ENST00000479239 GPBP1L1Q9HC44 474 aaPredicted RBP7.59□□□□□ -1.19
LRRC47-203ENST00000479239 CCDC87Q9NVE4 849 aa7.59□□□□□ -1.19
LRRC47-203ENST00000479239 CWC25Q9NXE8 425 aaPredicted RBP7.59□□□□□ -1.19
LRRC47-203ENST00000479239 PCDH10Q9P2E7 1040 aa7.59□□□□□ -1.19
LRRC47-203ENST00000479239 UBR2Q8IWV8 1755 aa7.59□□□□□ -1.2
LRRC47-203ENST00000479239 PALLDQ8WX93 1383 aa7.59□□□□□ -1.2
LRRC47-203ENST00000479239 IBTKQ9P2D0 1353 aaPredicted RBP7.59□□□□□ -1.2
LRRC47-203ENST00000479239 A0A087WZG4 1122 aa7.58□□□□□ -1.2
LRRC47-203ENST00000479239 C19orf67A6NJJ6 358 aa7.58□□□□□ -1.2
LRRC47-203ENST00000479239 SMARCA5O60264 1052 aaPredicted RBP7.58□□□□□ -1.2
LRRC47-203ENST00000479239 IL6STP40189 918 aaPredicted RBP7.58□□□□□ -1.2
LRRC47-203ENST00000479239 APLP1P51693 650 aa7.58□□□□□ -1.2
LRRC47-203ENST00000479239 ITPK1Q13572 414 aa7.58□□□□□ -1.2
LRRC47-203ENST00000479239 TXNRD1Q16881 649 aa7.58□□□□□ -1.2
LRRC47-203ENST00000479239 INTS5Q6P9B9 1019 aaKnown RBP7.58□□□□□ -1.2
LRRC47-203ENST00000479239 TNS4Q8IZW8 715 aa7.58□□□□□ -1.2
LRRC47-203ENST00000479239 CCDC191Q8NCU4 936 aa7.58□□□□□ -1.2
LRRC47-203ENST00000479239 NLGN2Q8NFZ4 835 aa7.58□□□□□ -1.2
LRRC47-203ENST00000479239 JARID2Q92833 1246 aaPredicted RBP7.58□□□□□ -1.2
LRRC47-203ENST00000479239 SUCLG2Q96I99 432 aa7.58□□□□□ -1.2
LRRC47-203ENST00000479239 BMP2KQ9NSY1 1161 aaPredicted RBP7.58□□□□□ -1.2
LRRC47-203ENST00000479239 EMILIN3Q9NT22 766 aa7.58□□□□□ -1.2
LRRC47-203ENST00000479239 EXOC6BQ9Y2D4 811 aa7.58□□□□□ -1.2
LRRC47-203ENST00000479239 ZBTB1Q9Y2K1 713 aa7.58□□□□□ -1.2
LRRC47-203ENST00000479239 WDR90Q96KV7 1748 aa7.58□□□□□ -1.2
LRRC47-203ENST00000479239 GOLGB1Q14789 3259 aaKnown RBP7.58□□□□□ -1.2
LRRC47-203ENST00000479239 MAP3K15Q6ZN16 1313 aa7.57□□□□□ -1.2
LRRC47-203ENST00000479239 H7C1W4 665 aa7.57□□□□□ -1.2
LRRC47-203ENST00000479239 KIF3CO14782 793 aa7.57□□□□□ -1.2
LRRC47-203ENST00000479239 RAB11FIP3O75154 756 aa7.57□□□□□ -1.2
LRRC47-203ENST00000479239 SURF6O75683 361 aaKnown RBP7.57□□□□□ -1.2
LRRC47-203ENST00000479239 CRKLP46109 303 aaKnown RBP7.57□□□□□ -1.2
LRRC47-203ENST00000479239 TCIRG1Q13488 830 aa7.57□□□□□ -1.2
LRRC47-203ENST00000479239 MTX1Q13505 466 aa7.57□□□□□ -1.2
LRRC47-203ENST00000479239 DSG2Q14126 1118 aa7.57□□□□□ -1.2
LRRC47-203ENST00000479239 HSP90AB4PQ58FF6 505 aa7.57□□□□□ -1.2
LRRC47-203ENST00000479239 HSP90AB3PQ58FF7 597 aa7.57□□□□□ -1.2
LRRC47-203ENST00000479239 UBE3BQ7Z3V4 1068 aa7.57□□□□□ -1.2
LRRC47-203ENST00000479239 C16orf71Q8IYS4 520 aaPredicted RBP7.57□□□□□ -1.2
LRRC47-203ENST00000479239 KAZALD1Q96I82 304 aa7.57□□□□□ -1.2
LRRC47-203ENST00000479239 ISCA1Q9BUE6 129 aa7.57□□□□□ -1.2
LRRC47-203ENST00000479239 LRRCC1Q9C099 1032 aa7.57□□□□□ -1.2
LRRC47-203ENST00000479239 BICC1Q9H694 974 aaKnown RBP7.57□□□□□ -1.2
LRRC47-203ENST00000479239 QSER1Q2KHR3 1735 aa7.57□□□□□ -1.2
LRRC47-203ENST00000479239 LAMB4A4D0S4 1761 aa7.56□□□□□ -1.2
LRRC47-203ENST00000479239 DOT1LQ8TEK3 1739 aa7.56□□□□□ -1.2
LRRC47-203ENST00000479239 ERVV-1B6SEH8 477 aa7.56□□□□□ -1.2
LRRC47-203ENST00000479239 EIF5P55010 431 aaKnown RBP7.56□□□□□ -1.2
LRRC47-203ENST00000479239 TRIM28Q13263 835 aaKnown RBP7.56□□□□□ -1.2
LRRC47-203ENST00000479239 OS9Q13438 667 aaPredicted RBP7.56□□□□□ -1.2
LRRC47-203ENST00000479239 C8orf34Q49A92 452 aa7.56□□□□□ -1.2
LRRC47-203ENST00000479239 DPY19L2Q6NUT2 758 aa7.56□□□□□ -1.2
LRRC47-203ENST00000479239 GIGYF2Q6Y7W6 1299 aaKnown RBP7.56□□□□□ -1.2
LRRC47-203ENST00000479239 DZIP3Q86Y13 1208 aaKnown RBP7.56□□□□□ -1.2
LRRC47-203ENST00000479239 JMYQ8N9B5 988 aa7.56□□□□□ -1.2
LRRC47-203ENST00000479239 TBC1D2BQ9UPU7 963 aa7.56□□□□□ -1.2
LRRC47-203ENST00000479239 ITGB4P16144 1822 aa7.55□□□□□ -1.2
LRRC47-203ENST00000479239 SPDYE16A6NNV3 312 aaPredicted RBP7.55□□□□□ -1.2
LRRC47-203ENST00000479239 GRIN3BO60391 1043 aa7.55□□□□□ -1.2
LRRC47-203ENST00000479239 CASP7P55210 303 aa7.55□□□□□ -1.2
LRRC47-203ENST00000479239 HLFQ16534 295 aa7.55□□□□□ -1.2
LRRC47-203ENST00000479239 RTL5Q5HYW3 569 aaPredicted RBP7.55□□□□□ -1.2
LRRC47-203ENST00000479239 EPHA10Q5JZY3 1008 aa7.55□□□□□ -1.2
LRRC47-203ENST00000479239 ERC1Q8IUD2 1116 aa7.55□□□□□ -1.2
LRRC47-203ENST00000479239 PLEKHM2Q8IWE5 1019 aa7.55□□□□□ -1.2
LRRC47-203ENST00000479239 MICALL2Q8IY33 904 aa7.55□□□□□ -1.2
LRRC47-203ENST00000479239 LINC00116Q8NCU8 138 aa7.55□□□□□ -1.2
LRRC47-203ENST00000479239 OTUD7AQ8TE49 926 aaPredicted RBP7.55□□□□□ -1.2
LRRC47-203ENST00000479239 ZNF526Q8TF50 670 aaPredicted RBP7.55□□□□□ -1.2
LRRC47-203ENST00000479239 CCNL1Q9UK58 526 aaPredicted RBP7.55□□□□□ -1.2
LRRC47-203ENST00000479239 NOP58Q9Y2X3 529 aaKnown RBP7.55□□□□□ -1.2
LRRC47-203ENST00000479239 TUBGCP6Q96RT7 1819 aa7.55□□□□□ -1.2
LRRC47-203ENST00000479239 GPTP24298 496 aa7.54□□□□□ -1.2
LRRC47-203ENST00000479239 KCNQ4P56696 695 aa7.54□□□□□ -1.2
LRRC47-203ENST00000479239 G3BP1Q13283 466 aaKnown RBP eCLIP7.54□□□□□ -1.24e-9■■■■■ 31.2
LRRC47-203ENST00000479239 BMP2KLQ5H9B9 411 aa7.54□□□□□ -1.2
LRRC47-203ENST00000479239 RHPN1Q8TCX5 695 aa7.54□□□□□ -1.2
LRRC47-203ENST00000479239 TMC2Q8TDI7 906 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms