RNA–Protein interactions for RNA: ENST00000378752.7

OPTN-204, Transcript of optineurin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene OPTN, Length 3,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-204ENST00000378752 ESCO1Q5FWF5 840 aa10.79□□□□□ -0.68
OPTN-204ENST00000378752 ZSWIM4Q9H7M6 989 aa10.79□□□□□ -0.68
OPTN-204ENST00000378752 ST7Q9NRC1 585 aa10.79□□□□□ -0.68
OPTN-204ENST00000378752 NPHP3Q7Z494 1330 aa10.79□□□□□ -0.68
OPTN-204ENST00000378752 ALKQ9UM73 1620 aa10.79□□□□□ -0.68
OPTN-204ENST00000378752 DLG5Q8TDM6 1919 aa10.79□□□□□ -0.68
OPTN-204ENST00000378752 KAT6BQ8WYB5 2073 aa10.79□□□□□ -0.68
OPTN-204ENST00000378752 FLT4P35916 1363 aa10.79□□□□□ -0.68
OPTN-204ENST00000378752 CPLX1O14810 134 aa10.79□□□□□ -0.68
OPTN-204ENST00000378752 FKBP4Q02790 459 aaKnown RBP eCLIP10.79□□□□□ -0.68
OPTN-204ENST00000378752 UBE3BQ7Z3V4 1068 aa10.79□□□□□ -0.68
OPTN-204ENST00000378752 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.79□□□□□ -0.68
OPTN-204ENST00000378752 GOLIM4O00461 696 aa10.79□□□□□ -0.68
OPTN-204ENST00000378752 LMOD1P29536 600 aaPredicted RBP10.79□□□□□ -0.68
OPTN-204ENST00000378752 ANKRD1Q15327 319 aa10.79□□□□□ -0.68
OPTN-204ENST00000378752 SYT10Q6XYQ8 523 aa10.79□□□□□ -0.68
OPTN-204ENST00000378752 ZSWIM6Q9HCJ5 1215 aa10.79□□□□□ -0.68
OPTN-204ENST00000378752 SALL3Q9BXA9 1300 aa10.79□□□□□ -0.68
OPTN-204ENST00000378752 ZC3H6P61129 1189 aaKnown RBP10.78□□□□□ -0.68
OPTN-204ENST00000378752 ERC1Q8IUD2 1116 aa10.78□□□□□ -0.68
OPTN-204ENST00000378752 MNS1Q8NEH6 495 aa10.78□□□□□ -0.68
OPTN-204ENST00000378752 TOMM22Q9NS69 142 aa10.78□□□□□ -0.68
OPTN-204ENST00000378752 IFT172Q9UG01 1749 aa10.78□□□□□ -0.68
OPTN-204ENST00000378752 SMTNL1A8MU46 457 aa10.78□□□□□ -0.68
OPTN-204ENST00000378752 DDX58O95786 925 aaKnown RBP10.78□□□□□ -0.68
OPTN-204ENST00000378752 BEND3Q5T5X7 828 aa10.78□□□□□ -0.68
OPTN-204ENST00000378752 PGBD1Q96JS3 809 aa10.78□□□□□ -0.68
OPTN-204ENST00000378752 DBF4Q9UBU7 674 aaPredicted RBP10.78□□□□□ -0.68
OPTN-204ENST00000378752 CFAP45Q9UL16 551 aa10.78□□□□□ -0.68
OPTN-204ENST00000378752 PIK3C2BO00750 1634 aa10.78□□□□□ -0.68
OPTN-204ENST00000378752 AATKQ6ZMQ8 1374 aa10.78□□□□□ -0.68
OPTN-204ENST00000378752 ROBO2Q9HCK4 1378 aa10.78□□□□□ -0.68
OPTN-204ENST00000378752 RPS6KB1P23443 525 aa10.78□□□□□ -0.68
OPTN-204ENST00000378752 GOLGA8FQ08AF8 430 aa10.78□□□□□ -0.68
OPTN-204ENST00000378752 GOLGA8DPQ0D2H9 430 aa10.78□□□□□ -0.68
OPTN-204ENST00000378752 NBPF6Q5VWK0 638 aa10.78□□□□□ -0.68
OPTN-204ENST00000378752 CEP57L1Q8IYX8 460 aa10.78□□□□□ -0.68
OPTN-204ENST00000378752 BBXQ8WY36 941 aaPredicted RBP10.78□□□□□ -0.68
OPTN-204ENST00000378752 NBPF4Q96M43 638 aa10.78□□□□□ -0.68
OPTN-204ENST00000378752 NLRP2Q9NX02 1062 aa10.78□□□□□ -0.68
OPTN-204ENST00000378752 MAP3K5Q99683 1374 aa10.77□□□□□ -0.68
OPTN-204ENST00000378752 ATP7BP35670 1465 aa10.77□□□□□ -0.68
OPTN-204ENST00000378752 URI1O94763 535 aaPredicted RBP10.77□□□□□ -0.68
OPTN-204ENST00000378752 APPP05067 770 aa10.77□□□□□ -0.68
OPTN-204ENST00000378752 MARCKSP29966 332 aaPredicted RBP10.77□□□□□ -0.68
OPTN-204ENST00000378752 ST3GAL1Q11201 340 aa10.77□□□□□ -0.68
OPTN-204ENST00000378752 KIF18AQ8NI77 898 aa10.77□□□□□ -0.68
OPTN-204ENST00000378752 CLSTN2Q9H4D0 955 aa10.77□□□□□ -0.68
OPTN-204ENST00000378752 CRB1P82279 1406 aa10.77□□□□□ -0.69
OPTN-204ENST00000378752 CPSF1Q10570 1443 aaKnown RBP10.77□□□□□ -0.69
OPTN-204ENST00000378752 USP32Q8NFA0 1604 aa10.77□□□□□ -0.69
OPTN-204ENST00000378752 GRM8O00222 908 aa10.77□□□□□ -0.69
OPTN-204ENST00000378752 RXRAP19793 462 aa10.77□□□□□ -0.69
OPTN-204ENST00000378752 LTKP29376 864 aa10.77□□□□□ -0.69
OPTN-204ENST00000378752 GJB4Q9NTQ9 266 aa10.77□□□□□ -0.69
OPTN-204ENST00000378752 RICTORQ6R327 1708 aa10.77□□□□□ -0.69
OPTN-204ENST00000378752 SERPINC1P01008 464 aa10.77□□□□□ -0.69
OPTN-204ENST00000378752 GTF2F1P35269 517 aaKnown RBP eCLIP10.77□□□□□ -0.69
OPTN-204ENST00000378752 ERCC6LQ2NKX8 1250 aa10.77□□□□□ -0.69
OPTN-204ENST00000378752 SYNE3Q6ZMZ3 975 aa10.77□□□□□ -0.69
OPTN-204ENST00000378752 CCDC82Q8N4S0 544 aa10.77□□□□□ -0.69
OPTN-204ENST00000378752 SPTLC3Q9NUV7 552 aa10.77□□□□□ -0.69
OPTN-204ENST00000378752 IFNKQ9P0W0 207 aa10.77□□□□□ -0.69
OPTN-204ENST00000378752 EIF4A1P60842 406 aaKnown RBP10.76□□□□□ -0.69
OPTN-204ENST00000378752 TFCP2Q12800 502 aa10.76□□□□□ -0.69
OPTN-204ENST00000378752 SNW1Q13573 536 aaKnown RBP10.76□□□□□ -0.69
OPTN-204ENST00000378752 TMEM87AQ8NBN3 555 aa10.76□□□□□ -0.69
OPTN-204ENST00000378752 USP28Q96RU2 1077 aa10.76□□□□□ -0.69
OPTN-204ENST00000378752 DBNDD2Q9BQY9 259 aa10.76□□□□□ -0.69
OPTN-204ENST00000378752 GTPBP4Q9BZE4 634 aaKnown RBP10.76□□□□□ -0.69
OPTN-204ENST00000378752 DNAI1Q9UI46 699 aa10.76□□□□□ -0.69
OPTN-204ENST00000378752 FRMPD1Q5SYB0 1578 aa10.76□□□□□ -0.69
OPTN-204ENST00000378752 HECW2Q9P2P5 1572 aa10.76□□□□□ -0.69
OPTN-204ENST00000378752 SSH2Q76I76 1423 aa10.76□□□□□ -0.69
OPTN-204ENST00000378752 HIP1O00291 1037 aa10.76□□□□□ -0.69
OPTN-204ENST00000378752 NECTIN1Q15223 517 aa10.76□□□□□ -0.69
OPTN-204ENST00000378752 STX1AQ16623 288 aa10.76□□□□□ -0.69
OPTN-204ENST00000378752 MLH3Q9UHC1 1453 aa10.75□□□□□ -0.69
OPTN-204ENST00000378752 TTC41PQ6P2S7 1318 aa10.75□□□□□ -0.69
OPTN-204ENST00000378752 PTPDC1A2A3K4 754 aa10.75□□□□□ -0.69
OPTN-204ENST00000378752 SASH1O94885 1247 aa10.75□□□□□ -0.69
OPTN-204ENST00000378752 SFPQP23246 707 aaKnown RBP eCLIP10.75□□□□□ -0.69
OPTN-204ENST00000378752 TIMM10P62072 90 aa10.75□□□□□ -0.69
OPTN-204ENST00000378752 TPM4P67936 248 aa10.75□□□□□ -0.69
OPTN-204ENST00000378752 CFAP100Q494V2 611 aa10.75□□□□□ -0.69
OPTN-204ENST00000378752 PLEKHO1Q53GL0 409 aaPredicted RBP10.75□□□□□ -0.69
OPTN-204ENST00000378752 COPS6Q7L5N1 327 aa10.75□□□□□ -0.69
OPTN-204ENST00000378752 SIGLEC1Q9BZZ2 1709 aa10.75□□□□□ -0.69
OPTN-204ENST00000378752 XAGE3Q8WTP9 111 aa10.75□□□□□ -0.69
OPTN-204ENST00000378752 CHMP4CQ96CF2 233 aa10.75□□□□□ -0.69
OPTN-204ENST00000378752 FUCA2Q9BTY2 467 aa10.75□□□□□ -0.69
OPTN-204ENST00000378752 GPHNQ9NQX3 736 aaPredicted RBP10.75□□□□□ -0.69
OPTN-204ENST00000378752 OGFRQ9NZT2 677 aa10.75□□□□□ -0.69
OPTN-204ENST00000378752 ANO10Q9NW15 660 aa10.75□□□□□ -0.69
OPTN-204ENST00000378752 TAF7LQ5H9L4 462 aa10.74□□□□□ -0.69
OPTN-204ENST00000378752 LRRC8AQ8IWT6 810 aa10.74□□□□□ -0.69
OPTN-204ENST00000378752 KIF20BQ96Q89 1820 aa10.74□□□□□ -0.69
OPTN-204ENST00000378752 TOB2Q14106 344 aaPredicted RBP10.74□□□□□ -0.69
OPTN-204ENST00000378752 KSR2Q6VAB6 950 aa10.74□□□□□ -0.69
OPTN-204ENST00000378752 KRT222Q8N1A0 295 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms