RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 IGSF1Q8N6C5 1336 aa20.12■□□□□ 0.81
PTPN18-201ENST00000175756 A0A087WZG4 1122 aa20.12■□□□□ 0.81
PTPN18-201ENST00000175756 CEP135Q66GS9 1140 aa20.12■□□□□ 0.81
PTPN18-201ENST00000175756 CEP57L1Q8IYX8 460 aa20.12■□□□□ 0.81
PTPN18-201ENST00000175756 RPS6KB1P23443 525 aa20.12■□□□□ 0.81
PTPN18-201ENST00000175756 NAA30Q147X3 362 aaPredicted RBP20.12■□□□□ 0.81
PTPN18-201ENST00000175756 FTOQ9C0B1 505 aaKnown RBP eCLIP20.12■□□□□ 0.81
PTPN18-201ENST00000175756 USP32Q8NFA0 1604 aa20.11■□□□□ 0.81
PTPN18-201ENST00000175756 NAT10Q9H0A0 1025 aaKnown RBP20.11■□□□□ 0.81
PTPN18-201ENST00000175756 MRVI1Q9Y6F6 885 aa20.11■□□□□ 0.81
PTPN18-201ENST00000175756 FRMPD1Q5SYB0 1578 aa20.11■□□□□ 0.81
PTPN18-201ENST00000175756 ZNF396Q96N95 335 aaPredicted RBP20.11■□□□□ 0.81
PTPN18-201ENST00000175756 ZNF589Q86UQ0 364 aaPredicted RBP20.11■□□□□ 0.81
PTPN18-201ENST00000175756 LINS1Q8NG48 757 aa20.11■□□□□ 0.81
PTPN18-201ENST00000175756 OTUD7BQ6GQQ9 843 aa20.1■□□□□ 0.81
PTPN18-201ENST00000175756 SMAP1Q8IYB5 467 aaPredicted RBP20.1■□□□□ 0.81
PTPN18-201ENST00000175756 THEMISQ8N1K5 641 aaPredicted RBP20.1■□□□□ 0.81
PTPN18-201ENST00000175756 NEO1Q92859 1461 aa20.1■□□□□ 0.81
PTPN18-201ENST00000175756 TFCP2Q12800 502 aa20.1■□□□□ 0.81
PTPN18-201ENST00000175756 AOPEPQ8N6M6 819 aa20.1■□□□□ 0.81
PTPN18-201ENST00000175756 PDILTQ8N807 584 aa20.1■□□□□ 0.81
PTPN18-201ENST00000175756 USP6P35125 1406 aa20.1■□□□□ 0.81
PTPN18-201ENST00000175756 HSP90AA4PQ58FG1 418 aa20.09■□□□□ 0.81
PTPN18-201ENST00000175756 TMX1Q9H3N1 280 aa20.09■□□□□ 0.81
PTPN18-201ENST00000175756 TAF6LQ9Y6J9 622 aa20.09■□□□□ 0.81
PTPN18-201ENST00000175756 A2ML1A8K2U0 1454 aa20.09■□□□□ 0.81
PTPN18-201ENST00000175756 NEURL4Q96JN8 1562 aa20.09■□□□□ 0.81
PTPN18-201ENST00000175756 ZNF75DP51815 510 aa20.09■□□□□ 0.81
PTPN18-201ENST00000175756 RALYLQ86SE5 291 aaKnown RBP20.09■□□□□ 0.81
PTPN18-201ENST00000175756 AP5Z1O43299 807 aa20.08■□□□□ 0.81
PTPN18-201ENST00000175756 CHGBP05060 677 aa20.08■□□□□ 0.81
PTPN18-201ENST00000175756 POLA2Q14181 598 aa20.08■□□□□ 0.81
PTPN18-201ENST00000175756 ALDH1L1O75891 902 aa20.08■□□□□ 0.81
PTPN18-201ENST00000175756 HSP90AB3PQ58FF7 597 aa20.08■□□□□ 0.8
PTPN18-201ENST00000175756 DBNDD2Q9BQY9 259 aa20.08■□□□□ 0.8
PTPN18-201ENST00000175756 SALL3Q9BXA9 1300 aa20.07■□□□□ 0.8
PTPN18-201ENST00000175756 MAPK8IP2Q13387 824 aaPredicted RBP20.07■□□□□ 0.8
PTPN18-201ENST00000175756 ARID5BQ14865 1188 aa20.07■□□□□ 0.8
PTPN18-201ENST00000175756 ATP2B3Q16720 1220 aa20.07■□□□□ 0.8
PTPN18-201ENST00000175756 KCNF1Q9H3M0 494 aa20.07■□□□□ 0.8
PTPN18-201ENST00000175756 SLFNL1Q499Z3 407 aa20.07■□□□□ 0.8
PTPN18-201ENST00000175756 AKAP4Q5JQC9 854 aa20.07■□□□□ 0.8
PTPN18-201ENST00000175756 ZSCAN25Q6NSZ9 544 aa20.07■□□□□ 0.8
PTPN18-201ENST00000175756 ANKRD24Q8TF21 1146 aa20.07■□□□□ 0.8
PTPN18-201ENST00000175756 CGNQ9P2M7 1197 aaKnown RBP20.07■□□□□ 0.8
PTPN18-201ENST00000175756 A0A1B0GVL5 298 aa20.06■□□□□ 0.8
PTPN18-201ENST00000175756 TIMM10P62072 90 aa20.06■□□□□ 0.8
PTPN18-201ENST00000175756 NECTIN1Q15223 517 aa20.06■□□□□ 0.8
PTPN18-201ENST00000175756 TMC6Q7Z403 805 aa20.06■□□□□ 0.8
PTPN18-201ENST00000175756 NFATC2IPQ8NCF5 419 aa20.06■□□□□ 0.8
PTPN18-201ENST00000175756 MNS1Q8NEH6 495 aa20.06■□□□□ 0.8
PTPN18-201ENST00000175756 ANO10Q9NW15 660 aa20.06■□□□□ 0.8
PTPN18-201ENST00000175756 CCDC69A6NI79 296 aa20.06■□□□□ 0.8
PTPN18-201ENST00000175756 TM6SF1Q9BZW5 370 aa20.06■□□□□ 0.8
PTPN18-201ENST00000175756 CLSTN2Q9H4D0 955 aa20.06■□□□□ 0.8
PTPN18-201ENST00000175756 SERPINC1P01008 464 aa20.06■□□□□ 0.8
PTPN18-201ENST00000175756 STX1AQ16623 288 aa20.06■□□□□ 0.8
PTPN18-201ENST00000175756 MAP4K1Q92918 833 aa20.06■□□□□ 0.8
PTPN18-201ENST00000175756 U3KPZ7 1027 aaPredicted RBP20.06■□□□□ 0.8
PTPN18-201ENST00000175756 RNMTO43148 476 aaKnown RBP20.05■□□□□ 0.8
PTPN18-201ENST00000175756 SASH1O94885 1247 aa20.05■□□□□ 0.8
PTPN18-201ENST00000175756 NFXL1Q6ZNB6 911 aa20.05■□□□□ 0.8
PTPN18-201ENST00000175756 ANKRD13DQ6ZTN6 518 aa20.05■□□□□ 0.8
PTPN18-201ENST00000175756 TMEM87AQ8NBN3 555 aa20.05■□□□□ 0.8
PTPN18-201ENST00000175756 LMBR1LQ6UX01 489 aa20.05■□□□□ 0.8
PTPN18-201ENST00000175756 KIF18AQ8NI77 898 aa20.05■□□□□ 0.8
PTPN18-201ENST00000175756 CACTINQ8WUQ7 758 aaKnown RBP20.05■□□□□ 0.8
PTPN18-201ENST00000175756 TRERF1Q96PN7 1200 aa20.05■□□□□ 0.8
PTPN18-201ENST00000175756 PTPDC1A2A3K4 754 aa20.05■□□□□ 0.8
PTPN18-201ENST00000175756 COL9A3Q14050 684 aaPredicted RBP20.04■□□□□ 0.8
PTPN18-201ENST00000175756 HMG20BQ9P0W2 317 aa20.04■□□□□ 0.8
PTPN18-201ENST00000175756 IFT172Q9UG01 1749 aa20.04■□□□□ 0.8
PTPN18-201ENST00000175756 TRDNQ13061 729 aa20.04■□□□□ 0.8
PTPN18-201ENST00000175756 AMOTQ4VCS5 1084 aa20.04■□□□□ 0.8
PTPN18-201ENST00000175756 TMEM2Q9UHN6 1383 aa20.04■□□□□ 0.8
PTPN18-201ENST00000175756 CCDC144CPQ8IYA2 1237 aa20.03■□□□□ 0.8
PTPN18-201ENST00000175756 IP6K1Q92551 441 aa20.03■□□□□ 0.8
PTPN18-201ENST00000175756 GIGYF1O75420 1035 aaPredicted RBP20.03■□□□□ 0.8
PTPN18-201ENST00000175756 IFIT1P09914 478 aaKnown RBP20.03■□□□□ 0.8
PTPN18-201ENST00000175756 SFPQP23246 707 aaKnown RBP eCLIP20.03■□□□□ 0.8
PTPN18-201ENST00000175756 MCMDC2Q4G0Z9 681 aa20.03■□□□□ 0.8
PTPN18-201ENST00000175756 LMOD1P29536 600 aaPredicted RBP20.03■□□□□ 0.8
PTPN18-201ENST00000175756 ZNF710Q8N1W2 664 aa20.03■□□□□ 0.8
PTPN18-201ENST00000175756 C8orf76Q96K31 380 aa20.03■□□□□ 0.8
PTPN18-201ENST00000175756 ZBTB3Q9H5J0 574 aa20.03■□□□□ 0.8
PTPN18-201ENST00000175756 CCDC82Q8N4S0 544 aa20.02■□□□□ 0.8
PTPN18-201ENST00000175756 MARCKSP29966 332 aaPredicted RBP20.02■□□□□ 0.8
PTPN18-201ENST00000175756 SMTNL1A8MU46 457 aa20.01■□□□□ 0.79
PTPN18-201ENST00000175756 CFAP100Q494V2 611 aa20.01■□□□□ 0.79
PTPN18-201ENST00000175756 KCNH5Q8NCM2 988 aa20.01■□□□□ 0.79
PTPN18-201ENST00000175756 ZSCAN16Q9H4T2 348 aaPredicted RBP20.01■□□□□ 0.79
PTPN18-201ENST00000175756 PDIA4P13667 645 aaKnown RBP20.01■□□□□ 0.79
PTPN18-201ENST00000175756 TATP17735 454 aaPredicted RBP20.01■□□□□ 0.79
PTPN18-201ENST00000175756 CABP4P57796 275 aa20■□□□□ 0.79
PTPN18-201ENST00000175756 TTLL5Q6EMB2 1281 aa20■□□□□ 0.79
PTPN18-201ENST00000175756 PAXBP1Q9Y5B6 917 aa20■□□□□ 0.79
PTPN18-201ENST00000175756 EPB41L2O43491 1005 aaKnown RBP20■□□□□ 0.79
PTPN18-201ENST00000175756 C11orf57Q6ZUT1 292 aaPredicted RBP20■□□□□ 0.79
PTPN18-201ENST00000175756 SIRT1Q96EB6 747 aa20■□□□□ 0.79
PTPN18-201ENST00000175756 DDX21Q9NR30 783 aaKnown RBP eCLIP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms