RNA–Protein interactions for RNA: ENSMUST00000164916.7

Ccdc58-203, Transcript of Coiled-coil domain-containing protein 58, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc58, Length 1,096 nt, Biotype protein coding, Subcellular localisation Axon, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58-203ENSMUST00000164916 Ltn1Q6A009 1767 aa21.88■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 Phrf1A6H619 1682 aa21.88■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 Vsig10D3YX43 558 aa21.87■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 NfixP70257 488 aa21.87■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 Slc39a11Q8BWY7 342 aa21.87■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 NogP97466 232 aa21.86■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 VgfQ0VGU4 617 aa21.86■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 Best3Q6H1V1 669 aa21.86■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 Tmem87bQ8BKU8 555 aa21.86■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 Chmp3Q9CQ10 224 aa21.86■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 Plekho1Q9JIY0 408 aa21.86■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 Col3a1P08121 1464 aa21.85■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 Prl3d3A0A0M6L0J6 224 aa21.85■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 Triml2E9PW10 424 aa21.85■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 Ier5O89113 308 aa21.85■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 Il15P48346 162 aa21.85■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 Map3k9Q3U1V8 1077 aa21.85■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 Rbm27Q5SFM8 1060 aaKnown RBP21.85■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 Pik3ap1Q9EQ32 811 aa21.85■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 Gjd4Q8BSD4 364 aa21.84■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 HlfQ8BW74 295 aa21.84■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 CpvlQ9D3S9 478 aa21.84■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 Popdc2Q9ES82 367 aa21.84■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 Sart3Q9JLI8 962 aaKnown RBP21.84■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 Slfn1Q9Z0I7 337 aa21.84■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 Cfap44E9Q5M6 1843 aa21.83■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 Csf1rP09581 977 aa21.83■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 Bend4P86174 541 aa21.83■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 Q8C5K5 320 aa21.83■■□□□ 1.09
Ccdc58-203ENSMUST00000164916 Brpf1B2RRD7 1212 aa21.82■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Gpr182P43142 395 aa21.82■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Atp6v1aP50516 617 aaKnown RBP21.82■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Atp8b2P98199 1209 aa21.82■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Cwc27Q3TKY6 469 aa21.82■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Slc4a10Q5DTL9 1118 aa21.82■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Jarid2Q62315 1234 aa21.82■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Tmem143Q8VD26 458 aa21.82■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Znf521Q6KAS7 1311 aa21.81■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Nrxn2E9Q7X7 1710 aa21.81■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 EvplQ9D952 2035 aa21.81■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Bin2D3Z6Q9 489 aa21.81■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Akap2O54931 893 aa21.81■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 AppP12023 770 aa21.81■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Celf1P28659 486 aaKnown RBP21.81■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Ftl2P49945 183 aa21.81■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Tm6sf1P58749 370 aa21.81■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 IntuQ059U7 942 aa21.81■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Chrna5Q2MKA5 467 aa21.81■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Myoz2Q9JJW5 264 aa21.81■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Gdf11Q9Z1W4 405 aa21.81■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Tspyl2Q7TQI8 677 aa21.8■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Sult6b1P0CC03 303 aa21.79■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Anxa1P10107 346 aaKnown RBP21.79■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Znf496Q5SXI5 585 aa21.79■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Gpr101Q80T62 511 aa21.79■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Srgap3Q812A2 1099 aa21.79■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Ppp1r42Q8R1Z4 357 aa21.79■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Eya2O08575 532 aa21.78■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 CfhP06909 1234 aa21.78■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Plbd2Q3TCN2 594 aa21.78■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Vil1Q62468 827 aa21.78■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Ncoa5Q91W39 579 aaKnown RBP21.78■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Ciao1Q99KN2 339 aa21.78■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Carmil3Q3UFQ8 1375 aa21.77■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Kiaa0232Q80U59 1396 aaKnown RBP21.77■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Pa2g4P50580 394 aaKnown RBP21.77■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Atp8a2P98200 1148 aa21.77■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Slc14a2Q8R4T9 930 aa21.77■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Fbxo3Q9DC63 480 aa21.77■■□□□ 1.08
Ccdc58-203ENSMUST00000164916 Tpx2A2APB8 745 aaKnown RBP21.76■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 PnnO35691 725 aaKnown RBP21.76■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 Adgre1Q61549 931 aa21.76■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 Znfx1Q8R151 1909 aaKnown RBP21.76■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 Scn11aQ9R053 1765 aa21.76■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 Kdm3aQ6PCM1 1323 aa21.76■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 AampJ3QN89 436 aa21.75■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 Mbd3Q9Z2D8 285 aaKnown RBP21.75■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 GabrdP22933 449 aa21.74■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 Ppp4r3aQ6P2K6 820 aa21.74■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 WdpcpQ8C456 722 aa21.74■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 Sh3bp5Q9Z131 463 aa21.74■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 Zc3h15Q3TIV5 426 aaKnown RBP21.73■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 Ell2Q3UKU1 639 aa21.73■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 Atg9aQ68FE2 551 aa21.73■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 Dhx38Q80X98 1228 aa21.73■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 Zkscan8Q8BSL0 588 aa21.73■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 Plekhg6Q8R0J1 787 aa21.73■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 HnrnpuQ8VEK3 800 aaKnown RBP21.73■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 LratQ9JI60 231 aa21.73■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 Zfp646Q6NV66 1788 aa21.72■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 Nup98Q6PFD9 1816 aaKnown RBP21.72■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 Pde8bE9Q4S1 865 aa21.72■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 XpcP51612 930 aa21.72■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 Plekhf1Q3TB82 279 aa21.72■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 Rrs1Q9CYH6 365 aaKnown RBP21.72■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 Stk32bQ9JJX8 414 aa21.72■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 Eddm13E9Q7F5 164 aa21.71■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 Ddx46Q569Z5 1032 aaKnown RBP21.71■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 Rab3gap1Q80UJ7 981 aa21.71■■□□□ 1.07
Ccdc58-203ENSMUST00000164916 Fam13aQ8BGI4 693 aa21.71■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms