RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Babam1Q3UI43 333 aa18.55■□□□□ 0.56
Vcan-201ENSMUST00000109543 Mb21d2Q8C525 428 aa18.55■□□□□ 0.56
Vcan-201ENSMUST00000109543 Lrrfip2Q91WK0 415 aa18.55■□□□□ 0.56
Vcan-201ENSMUST00000109543 Gsdma2Q32M21 443 aa18.54■□□□□ 0.56
Vcan-201ENSMUST00000109543 Mad1l1Q9WTX8 717 aaKnown RBP18.54■□□□□ 0.56
Vcan-201ENSMUST00000109543 PappaQ8R4K8 1624 aa18.53■□□□□ 0.56
Vcan-201ENSMUST00000109543 Cers3Q1A3B0 383 aa18.53■□□□□ 0.56
Vcan-201ENSMUST00000109543 ZyxQ62523 564 aa18.53■□□□□ 0.56
Vcan-201ENSMUST00000109543 Naa30Q8CES0 364 aa18.53■□□□□ 0.56
Vcan-201ENSMUST00000109543 Ddx54Q8K4L0 874 aaKnown RBP18.53■□□□□ 0.56
Vcan-201ENSMUST00000109543 Erc1Q99MI1 1120 aa18.53■□□□□ 0.56
Vcan-201ENSMUST00000109543 Rtn4Q99P72 1162 aaKnown RBP18.53■□□□□ 0.56
Vcan-201ENSMUST00000109543 Fam84aQ9D650 292 aa18.53■□□□□ 0.56
Vcan-201ENSMUST00000109543 Sytl4Q9R0Q1 673 aa18.53■□□□□ 0.56
Vcan-201ENSMUST00000109543 Tnrc6cQ3UHC0 1690 aaKnown RBP18.53■□□□□ 0.56
Vcan-201ENSMUST00000109543 FanccP50652 591 aa18.52■□□□□ 0.56
Vcan-201ENSMUST00000109543 BcanQ61361 883 aa18.52■□□□□ 0.56
Vcan-201ENSMUST00000109543 Ltv1Q6NSQ7 470 aaKnown RBP18.52■□□□□ 0.56
Vcan-201ENSMUST00000109543 Rnf214Q8BFU3 668 aaKnown RBP18.52■□□□□ 0.56
Vcan-201ENSMUST00000109543 Krt25Q8VCW2 446 aa18.52■□□□□ 0.56
Vcan-201ENSMUST00000109543 Col22a1E9Q7P1 1613 aa18.52■□□□□ 0.56
Vcan-201ENSMUST00000109543 Akap11E9Q777 1895 aa18.52■□□□□ 0.56
Vcan-201ENSMUST00000109543 Ncoa5Q91W39 579 aaKnown RBP18.52■□□□□ 0.56
Vcan-201ENSMUST00000109543 NaspQ99MD9 773 aaKnown RBP18.52■□□□□ 0.56
Vcan-201ENSMUST00000109543 Gigyf1Q99MR1 1044 aaKnown RBP18.52■□□□□ 0.56
Vcan-201ENSMUST00000109543 Nav1Q8CH77 1875 aa18.51■□□□□ 0.55
Vcan-201ENSMUST00000109543 Irgm2A0A140LIF8 407 aa18.51■□□□□ 0.55
Vcan-201ENSMUST00000109543 Cyp2d10P24456 504 aa18.51■□□□□ 0.55
Vcan-201ENSMUST00000109543 Asap2Q7SIG6 958 aa18.51■□□□□ 0.55
Vcan-201ENSMUST00000109543 Ipo4Q8VI75 1082 aa18.51■□□□□ 0.55
Vcan-201ENSMUST00000109543 Ciao1Q99KN2 339 aa18.51■□□□□ 0.55
Vcan-201ENSMUST00000109543 Hdac6Q9Z2V5 1149 aa18.51■□□□□ 0.55
Vcan-201ENSMUST00000109543 Abca3Q8R420 1704 aa18.51■□□□□ 0.55
Vcan-201ENSMUST00000109543 Kcnh4A2A5F7 1018 aa18.51■□□□□ 0.55
Vcan-201ENSMUST00000109543 Nol10Q5RJG1 687 aaKnown RBP18.51■□□□□ 0.55
Vcan-201ENSMUST00000109543 Gnl3lQ6PGG6 577 aaKnown RBP18.51■□□□□ 0.55
Vcan-201ENSMUST00000109543 Rassf8Q8CJ96 419 aa18.51■□□□□ 0.55
Vcan-201ENSMUST00000109543 GptQ8QZR5 496 aa18.51■□□□□ 0.55
Vcan-201ENSMUST00000109543 Ube2hP62257 183 aa18.5■□□□□ 0.55
Vcan-201ENSMUST00000109543 Ccdc66Q6NS45 935 aa18.5■□□□□ 0.55
Vcan-201ENSMUST00000109543 Paxip1Q6NZQ4 1056 aa18.5■□□□□ 0.55
Vcan-201ENSMUST00000109543 Tmem266Q8BZB3 538 aa18.5■□□□□ 0.55
Vcan-201ENSMUST00000109543 Usp44Q8C2S0 711 aa18.5■□□□□ 0.55
Vcan-201ENSMUST00000109543 Lmbrd2Q8C561 694 aa18.5■□□□□ 0.55
Vcan-201ENSMUST00000109543 Ccdc178Q8CDV0 866 aa18.5■□□□□ 0.55
Vcan-201ENSMUST00000109543 Bloc1s2Q9CWG9 143 aa18.5■□□□□ 0.55
Vcan-201ENSMUST00000109543 Nip7Q9CXK8 180 aaKnown RBP18.5■□□□□ 0.55
Vcan-201ENSMUST00000109543 Prl7a2O54831 253 aa18.5■□□□□ 0.55
Vcan-201ENSMUST00000109543 Slc4a1P04919 929 aa18.5■□□□□ 0.55
Vcan-201ENSMUST00000109543 Clca2Q8BG22 942 aa18.5■□□□□ 0.55
Vcan-201ENSMUST00000109543 Sh3bp5Q9Z131 463 aa18.5■□□□□ 0.55
Vcan-201ENSMUST00000109543 Aox1O54754 1333 aa18.5■□□□□ 0.55
Vcan-201ENSMUST00000109543 Sipa1l3G3X9J0 1776 aa18.49■□□□□ 0.55
Vcan-201ENSMUST00000109543 Samm50Q8BGH2 469 aa18.49■□□□□ 0.55
Vcan-201ENSMUST00000109543 Kdm4aQ8BW72 1064 aa18.49■□□□□ 0.55
Vcan-201ENSMUST00000109543 Zfp113Q8C689 439 aa18.49■□□□□ 0.55
Vcan-201ENSMUST00000109543 Rdm1Q9CQK3 281 aa18.49■□□□□ 0.55
Vcan-201ENSMUST00000109543 Erich6bQ9D4S6 220 aa18.49■□□□□ 0.55
Vcan-201ENSMUST00000109543 Zeb2Q9R0G7 1215 aa18.49■□□□□ 0.55
Vcan-201ENSMUST00000109543 Ctdnep1Q3TP92 244 aa18.49■□□□□ 0.55
Vcan-201ENSMUST00000109543 Casc1Q6TDU8 730 aa18.49■□□□□ 0.55
Vcan-201ENSMUST00000109543 Dcaf5Q80T85 946 aa18.49■□□□□ 0.55
Vcan-201ENSMUST00000109543 Ptcd1Q8C2E4 695 aaKnown RBP18.49■□□□□ 0.55
Vcan-201ENSMUST00000109543 Cyp19a1P28649 503 aa18.48■□□□□ 0.55
Vcan-201ENSMUST00000109543 Cd22P35329 862 aa18.48■□□□□ 0.55
Vcan-201ENSMUST00000109543 Leo1Q5XJE5 667 aa18.48■□□□□ 0.55
Vcan-201ENSMUST00000109543 Rbm17Q8JZX4 405 aaKnown RBP18.48■□□□□ 0.55
Vcan-201ENSMUST00000109543 Cep57l1Q8VDS7 400 aa18.48■□□□□ 0.55
Vcan-201ENSMUST00000109543 Stat1P42225 749 aa18.48■□□□□ 0.55
Vcan-201ENSMUST00000109543 Pcmtd1P59913 357 aa18.48■□□□□ 0.55
Vcan-201ENSMUST00000109543 Ppp6r1Q7TSI3 856 aa18.48■□□□□ 0.55
Vcan-201ENSMUST00000109543 Ppp1r10Q80W00 888 aaKnown RBP18.47■□□□□ 0.55
Vcan-201ENSMUST00000109543 Me3Q8BMF3 604 aa18.47■□□□□ 0.55
Vcan-201ENSMUST00000109543 Ccdc158Q8CDI6 1109 aa18.47■□□□□ 0.55
Vcan-201ENSMUST00000109543 Tubb6Q922F4 447 aa18.47■□□□□ 0.55
Vcan-201ENSMUST00000109543 Zbtb22Q9Z0G7 638 aa18.47■□□□□ 0.55
Vcan-201ENSMUST00000109543 Fbxl16A2RT62 479 aa18.46■□□□□ 0.55
Vcan-201ENSMUST00000109543 Mctp2Q5RJH2 878 aa18.46■□□□□ 0.55
Vcan-201ENSMUST00000109543 E4f1Q8CCE9 783 aa18.46■□□□□ 0.55
Vcan-201ENSMUST00000109543 Med4Q9CQA5 270 aa18.46■□□□□ 0.55
Vcan-201ENSMUST00000109543 Rcan3Q9JKK0 239 aa18.46■□□□□ 0.55
Vcan-201ENSMUST00000109543 TnksQ6PFX9 1320 aa18.46■□□□□ 0.55
Vcan-201ENSMUST00000109543 Npc1l1Q6T3U4 1333 aa18.46■□□□□ 0.55
Vcan-201ENSMUST00000109543 Ftl2P49945 183 aa18.46■□□□□ 0.55
Vcan-201ENSMUST00000109543 Sik1Q60670 779 aa18.46■□□□□ 0.55
Vcan-201ENSMUST00000109543 Zscan22Q8BGS5 496 aa18.46■□□□□ 0.55
Vcan-201ENSMUST00000109543 Iffo2Q8R2V2 512 aa18.46■□□□□ 0.55
Vcan-201ENSMUST00000109543 Igbp1bQ9QZ29 343 aa18.46■□□□□ 0.55
Vcan-201ENSMUST00000109543 Gimap5Q8BWF2 308 aa18.45■□□□□ 0.54
Vcan-201ENSMUST00000109543 Anxa1P10107 346 aaKnown RBP18.45■□□□□ 0.54
Vcan-201ENSMUST00000109543 Hspd1P63038 573 aaKnown RBP18.45■□□□□ 0.54
Vcan-201ENSMUST00000109543 Nap1l3Q794H2 544 aa18.45■□□□□ 0.54
Vcan-201ENSMUST00000109543 Plcb3P51432 1234 aaKnown RBP18.44■□□□□ 0.54
Vcan-201ENSMUST00000109543 Zkscan8Q8BSL0 588 aa18.44■□□□□ 0.54
Vcan-201ENSMUST00000109543 Nup88Q8CEC0 753 aaKnown RBP18.44■□□□□ 0.54
Vcan-201ENSMUST00000109543 Nlrp3Q8R4B8 1033 aa18.44■□□□□ 0.54
Vcan-201ENSMUST00000109543 ZwintQ9CQU5 252 aa18.44■□□□□ 0.54
Vcan-201ENSMUST00000109543 Cnnm3Q32NY4 713 aa18.44■□□□□ 0.54
Vcan-201ENSMUST00000109543 AidaQ8C4Q6 305 aa18.44■□□□□ 0.54
Vcan-201ENSMUST00000109543 Wdr24Q8CFJ9 790 aa18.44■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 44.9 ms