RNA–Protein interactions for RNA: ENSMUST00000106619.7

Ttc39a-203, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

TSL 1 (best) BASIC

Gene Ttc39a, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-203ENSMUST00000106619 Pdia3P27773 505 aaKnown RBP23.48■■□□□ 1.35
Ttc39a-203ENSMUST00000106619 Zkscan8Q8BSL0 588 aa23.48■■□□□ 1.35
Ttc39a-203ENSMUST00000106619 Kif2cQ922S8 721 aa23.48■■□□□ 1.35
Ttc39a-203ENSMUST00000106619 Gja10Q9WUS4 505 aa23.48■■□□□ 1.35
Ttc39a-203ENSMUST00000106619 Nphp3Q7TNH6 1325 aa23.48■■□□□ 1.35
Ttc39a-203ENSMUST00000106619 Kif23E9Q5G3 953 aa23.47■■□□□ 1.35
Ttc39a-203ENSMUST00000106619 Tbc1d32Q3URV1 1296 aa23.47■■□□□ 1.35
Ttc39a-203ENSMUST00000106619 Sned1Q70E20 1403 aa23.47■■□□□ 1.35
Ttc39a-203ENSMUST00000106619 Znf609Q8BZ47 1413 aa23.47■■□□□ 1.35
Ttc39a-203ENSMUST00000106619 Plbd2Q3TCN2 594 aa23.47■■□□□ 1.35
Ttc39a-203ENSMUST00000106619 EappQ5BU09 281 aa23.47■■□□□ 1.35
Ttc39a-203ENSMUST00000106619 Kif13bA0A286YCV9 1847 aa23.46■■□□□ 1.35
Ttc39a-203ENSMUST00000106619 Timm10P62073 90 aa23.46■■□□□ 1.35
Ttc39a-203ENSMUST00000106619 Msl1Q6PDM1 616 aa23.46■■□□□ 1.35
Ttc39a-203ENSMUST00000106619 Egfem1Q8C088 590 aa23.46■■□□□ 1.35
Ttc39a-203ENSMUST00000106619 Mfap1aC0HKD8 439 aaKnown RBP23.45■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Mfap1bC0HKD9 439 aaKnown RBP23.45■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Ube4aE9Q735 1028 aa23.45■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Eva1cP58659 440 aa23.45■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 1810065E05RikQ5NC41 235 aa23.45■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Pde3bQ61409 1100 aa23.45■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Unc5clQ6R653 518 aa23.45■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Ppp6r3Q922D4 844 aa23.45■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Col3a1P08121 1464 aa23.45■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Prdm11A2AGX3 565 aa23.45■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Aknad1E9Q8N6 675 aa23.45■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Znf692Q3U381 531 aa23.45■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Nucb1Q02819 459 aaKnown RBP23.44■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Asap2Q7SIG6 958 aa23.44■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Tmem266Q8BZB3 538 aa23.44■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Brf1Q8CFK2 676 aa23.44■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Myo3bQ1EG27 1305 aa23.43■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Pde8bE9Q4S1 865 aa23.43■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Plekhf1Q3TB82 279 aa23.43■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Zbtb45Q52KG4 520 aa23.43■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Rab3gap1Q80UJ7 981 aa23.43■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Rhot2Q8JZN7 620 aa23.43■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 1700029H14RikE9PY36 240 aa23.42■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Slurp2P0DP59 97 aa23.42■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 CalcaP70160 136 aa23.42■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 VeztQ3ZK22 780 aa23.42■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Ambra1A2AH22 1300 aa23.42■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Sh3tc1G3X9F6 1346 aa23.42■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Atp2b3Q0VF55 1220 aa23.42■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Prune1Q8BIW1 454 aa23.42■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Cfap44E9Q5M6 1843 aa23.42■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Slc39a11Q8BWY7 342 aa23.41■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 St5Q924W7 1134 aa23.4■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Kcnq5Q9JK45 933 aa23.4■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Gm7347D3YYI9 267 aa23.4■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Speer4aF8VPX6 267 aa23.4■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 TsksO54887 585 aa23.4■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Slc4a1P04919 929 aa23.4■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Wdhd1P59328 1117 aa23.4■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Strip1Q8C079 837 aa23.4■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Stk3Q9JI10 497 aa23.4■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Sh3bp5Q9Z131 463 aa23.4■■□□□ 1.34
Ttc39a-203ENSMUST00000106619 Sde2Q8K1J5 448 aaKnown RBP23.39■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Tmem143Q8VD26 458 aa23.39■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Atxn2lQ7TQH0 1049 aaKnown RBP23.38■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Ift57Q8BXG3 429 aa23.38■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Il1rapl2Q9ERS6 686 aa23.38■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Lgr5Q9Z1P4 907 aa23.38■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 EspnlQ3UYR4 1005 aa23.37■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Ezh2Q61188 746 aaKnown RBP23.37■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Col23a1Q8K4G2 532 aa23.37■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Krt25Q8VCW2 446 aa23.37■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Adarb2Q9JI20 745 aa23.37■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Togaram1Q6A070 1776 aaKnown RBP23.37■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Heg1E9Q7X6 1337 aa23.37■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Speer4dL7N216 212 aa23.37■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Znf496Q5SXI5 585 aa23.37■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Ppil4Q9CXG3 492 aaKnown RBP23.37■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Rbbp8nlA2ABX0 614 aa23.36■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Sept1P42209 366 aa23.36■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Rps8P62242 208 aaKnown RBP23.36■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Vps54Q5SPW0 977 aa23.36■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 GapdhsQ64467 440 aa23.36■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 McamQ8R2Y2 648 aaKnown RBP23.36■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Scn11aQ9R053 1765 aa23.35■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Hsp90b1P08113 802 aaKnown RBP23.35■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 GabrdP22933 449 aa23.35■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Nol8Q3UHX0 1147 aaKnown RBP23.35■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 ZyxQ62523 564 aa23.35■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Rbm5Q91YE7 815 aaKnown RBP23.35■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Naa16Q9DBB4 864 aa23.35■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Ccne2Q9Z238 404 aa23.35■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Map3k15A2AQW0 1331 aa23.34■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Gm4340L7N2C4 268 aa23.34■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Chrna2Q91X60 512 aa23.34■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Popdc2Q9ES82 367 aa23.34■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Phrf1A6H619 1682 aa23.33■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Oas2E9Q9A9 742 aa23.33■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Kiaa0753Q6A000 959 aa23.33■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Ppip5k2Q6ZQB6 1129 aa23.33■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Rdm1Q9CQK3 281 aa23.33■■□□□ 1.33
Ttc39a-203ENSMUST00000106619 Prom2Q3UUY6 835 aa23.32■■□□□ 1.32
Ttc39a-203ENSMUST00000106619 ErfeQ6PGN1 340 aa23.32■■□□□ 1.32
Ttc39a-203ENSMUST00000106619 Dydc2Q9D3X8 139 aa23.32■■□□□ 1.32
Ttc39a-203ENSMUST00000106619 Sptlc3Q8BG54 563 aa23.32■■□□□ 1.32
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms