RNA–Protein interactions for RNA: ENSMUST00000093196.10

Hmgb1-202, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,092 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-202ENSMUST00000093196 Adamts13Q769J6 1426 aa15.78■□□□□ 0.12
Hmgb1-202ENSMUST00000093196 Map3k19E9Q3S4 1311 aa15.78■□□□□ 0.12
Hmgb1-202ENSMUST00000093196 Slurp2P0DP59 97 aa15.78■□□□□ 0.12
Hmgb1-202ENSMUST00000093196 Ccr5P51682 354 aa15.78■□□□□ 0.12
Hmgb1-202ENSMUST00000093196 Ppp4cP97470 307 aa15.78■□□□□ 0.12
Hmgb1-202ENSMUST00000093196 ApobrQ8VBT6 942 aa15.78■□□□□ 0.12
Hmgb1-202ENSMUST00000093196 Rnf225Q9D7D1 332 aa15.78■□□□□ 0.12
Hmgb1-202ENSMUST00000093196 Aebp2Q9Z248 504 aaKnown RBP15.78■□□□□ 0.12
Hmgb1-202ENSMUST00000093196 Piezo2Q8CD54 2822 aa15.78■□□□□ 0.12
Hmgb1-202ENSMUST00000093196 NntQ61941 1086 aaKnown RBP15.77■□□□□ 0.12
Hmgb1-202ENSMUST00000093196 Eif4g2Q62448 906 aaKnown RBP15.77■□□□□ 0.12
Hmgb1-202ENSMUST00000093196 Brd2Q7JJ13 798 aaKnown RBP15.77■□□□□ 0.12
Hmgb1-202ENSMUST00000093196 RubcnQ80U62 956 aa15.77■□□□□ 0.12
Hmgb1-202ENSMUST00000093196 Mical3Q8CJ19 1993 aa15.76■□□□□ 0.11
Hmgb1-202ENSMUST00000093196 Msh6P54276 1358 aaKnown RBP15.76■□□□□ 0.11
Hmgb1-202ENSMUST00000093196 Smarcc1P97496 1104 aa15.76■□□□□ 0.11
Hmgb1-202ENSMUST00000093196 Glis2Q8VDL9 521 aa15.76■□□□□ 0.11
Hmgb1-202ENSMUST00000093196 RalgapbQ8BQZ4 1484 aa15.76■□□□□ 0.11
Hmgb1-202ENSMUST00000093196 Col15a1O35206 1367 aa15.75■□□□□ 0.11
Hmgb1-202ENSMUST00000093196 Znf335A2A5K6 1337 aa15.75■□□□□ 0.11
Hmgb1-202ENSMUST00000093196 Gm42688A0A0R3P9D1 673 aa15.75■□□□□ 0.11
Hmgb1-202ENSMUST00000093196 Ccdc142Q8CAI1 738 aa15.75■□□□□ 0.11
Hmgb1-202ENSMUST00000093196 Eva1bQ8K2Y3 164 aa15.75■□□□□ 0.11
Hmgb1-202ENSMUST00000093196 Cd248Q91V98 765 aa15.75■□□□□ 0.11
Hmgb1-202ENSMUST00000093196 Chmp3Q9CQ10 224 aa15.75■□□□□ 0.11
Hmgb1-202ENSMUST00000093196 MsmpB1AWI6 139 aa15.74■□□□□ 0.11
Hmgb1-202ENSMUST00000093196 Hsd3b3P26150 373 aa15.74■□□□□ 0.11
Hmgb1-202ENSMUST00000093196 Cog6Q8R3I3 657 aa15.74■□□□□ 0.11
Hmgb1-202ENSMUST00000093196 PtprnQ60673 979 aa15.73■□□□□ 0.11
Hmgb1-202ENSMUST00000093196 Speer4bQ9D9F7 267 aa15.73■□□□□ 0.11
Hmgb1-202ENSMUST00000093196 Gm16486A0A1D5RMD1 1434 aa15.72■□□□□ 0.11
Hmgb1-202ENSMUST00000093196 Cul4bA2A432 970 aaKnown RBP15.72■□□□□ 0.11
Hmgb1-202ENSMUST00000093196 Gtf3c3Q3TMP1 882 aa15.72■□□□□ 0.11
Hmgb1-202ENSMUST00000093196 Ccnl1Q52KE7 532 aaKnown RBP15.72■□□□□ 0.11
Hmgb1-202ENSMUST00000093196 Fhod1Q6P9Q4 1197 aa15.72■□□□□ 0.11
Hmgb1-202ENSMUST00000093196 Prpf40aQ9R1C7 953 aaKnown RBP15.72■□□□□ 0.11
Hmgb1-202ENSMUST00000093196 RtcbQ99LF4 505 aaKnown RBP15.71■□□□□ 0.11
Hmgb1-202ENSMUST00000093196 Kcna1P16388 495 aa15.7■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Fgd1P52734 960 aa15.7■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 5730596B20RikQ8BQ08 205 aa15.7■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Ubxn2aQ99KJ0 258 aa15.7■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Gsto1O09131 240 aa15.69■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Scarf1Q5ND28 820 aa15.69■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Larp1Q6ZQ58 1072 aaKnown RBP15.69■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Tm4sf4Q91XD3 202 aa15.69■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Chd4Q6PDQ2 1915 aaKnown RBP15.68■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Scn9aQ62205 1984 aa15.68■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Map3k9Q3U1V8 1077 aa15.68■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 SympkQ80X82 1284 aa15.68■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 TkfcQ8VC30 578 aa15.68■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Nphp4P59240 1425 aa15.68■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Kif16bB1AVY7 1312 aa15.68■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Gm10471E9Q1C7 252 aa15.67■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Znf423Q80TS5 1292 aa15.67■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Map10Q8BJS7 891 aa15.67■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 4930504O13RikQ8C5Z9 145 aa15.67■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Adgrf1Q8VEC3 908 aa15.67■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Brd1E9PZ26 1189 aaKnown RBP15.66■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Mcm6P97311 821 aa15.66■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Usp40Q8BWR4 1235 aa15.66■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Amhr2Q8K592 568 aa15.66■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Nfxl1E9Q8I7 918 aaKnown RBP15.65■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Wdhd1P59328 1117 aa15.65■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Sec1P97353 368 aa15.65■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 SpidrQ8BGX7 933 aa15.65■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Znf467Q8JZL0 594 aa15.65■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Ubr1O70481 1757 aa15.64■□□□□ 0.1
Hmgb1-202ENSMUST00000093196 Uhrf1bp1B2KF50 1429 aa15.64■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Ly6dP35459 127 aa15.64■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Bms1Q6PGF5 1284 aaKnown RBP15.64■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Fbxo3Q9DC63 480 aa15.64■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Gm8882E9Q7E4 283 aa15.63■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Miga2Q8BK03 593 aa15.63■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Fam221bQ8C627 487 aa15.63■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Dcdc2bF7BCK0 340 aa15.62■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Sema3fO88632 785 aa15.62■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Fhdc1Q3ULZ2 1149 aa15.62■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Thrap3Q569Z6 951 aaKnown RBP15.62■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Hdac6Q9Z2V5 1149 aa15.62■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Gja5Q01231 358 aa15.61■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Pdzph1Q8BGR1 1238 aa15.61■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Lgr5Q9Z1P4 907 aa15.61■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Mfap1aC0HKD8 439 aaKnown RBP15.6■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Mfap1bC0HKD9 439 aaKnown RBP15.6■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Wbp1lQ8BGW2 348 aa15.6■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Fubp1Q91WJ8 651 aaKnown RBP15.6■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Mmp16Q9WTR0 607 aa15.6■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Klra1P20937 262 aa15.59■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Ccdc85aQ5SP85 500 aa15.59■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Sh3d21Q7TSG5 549 aa15.59■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Fbxo45Q8K3B1 286 aa15.59■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Col25a1Q99MQ5 666 aa15.59■□□□□ 0.09
Hmgb1-202ENSMUST00000093196 Lrch1P62046 709 aa15.58■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 UvssaQ9D479 717 aa15.58■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Itgb7P26011 806 aa15.57■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Gabbr2Q80T41 940 aa15.57■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Mphosph9A6H5Y1 991 aa15.56■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Ccser2Q3UHI0 833 aa15.56■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Dpf2Q61103 391 aaKnown RBP15.56■□□□□ 0.08
Hmgb1-202ENSMUST00000093196 Gpbp1l1Q6NZP2 473 aa15.56■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms