Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Gm25239-201ENSMUST00000174915 86 ntBASIC40.16■■■■■ 4.02
Sh3d21Q7TSG5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
Sh3d21Q7TSG5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.91■■■■□ 3.5
Sh3d21Q7TSG5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
Sh3d21Q7TSG5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.15■■■■□ 3.38
Sh3d21Q7TSG5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.85■■■■□ 3.33
Sh3d21Q7TSG5 Gm15042-201ENSMUST00000120212 883 ntBASIC35.61■■■■□ 3.29
Sh3d21Q7TSG5 Gm15045-201ENSMUST00000117359 883 ntBASIC34.85■■■■□ 3.17
Sh3d21Q7TSG5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Sh3d21Q7TSG5 Gm24109-201ENSMUST00000175489 103 ntBASIC34.53■■■■□ 3.12
Sh3d21Q7TSG5 Psd-208ENSMUST00000224556 2034 ntBASIC34.39■■■■□ 3.1
Sh3d21Q7TSG5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Sh3d21Q7TSG5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.01■■■■□ 3.03
Sh3d21Q7TSG5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.95■■■■□ 3.03
Sh3d21Q7TSG5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
Sh3d21Q7TSG5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.84■■■■□ 3.01
Sh3d21Q7TSG5 Gm23366-201ENSMUST00000175022 89 ntBASIC33.63■■■□□ 2.97
Sh3d21Q7TSG5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.6■■■□□ 2.97
Sh3d21Q7TSG5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.48■■■□□ 2.95
Sh3d21Q7TSG5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Sh3d21Q7TSG5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Sh3d21Q7TSG5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.31■■■□□ 2.92
Sh3d21Q7TSG5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.3■■■□□ 2.92
Sh3d21Q7TSG5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.28■■■□□ 2.92
Sh3d21Q7TSG5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Sh3d21Q7TSG5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Sh3d21Q7TSG5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Sh3d21Q7TSG5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.1■■■□□ 2.89
Sh3d21Q7TSG5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Sh3d21Q7TSG5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Sh3d21Q7TSG5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
Sh3d21Q7TSG5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.75■■■□□ 2.83
Sh3d21Q7TSG5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.73■■■□□ 2.83
Sh3d21Q7TSG5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.69■■■□□ 2.82
Sh3d21Q7TSG5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
Sh3d21Q7TSG5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Sh3d21Q7TSG5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Sh3d21Q7TSG5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Sh3d21Q7TSG5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Sh3d21Q7TSG5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.17■■■□□ 2.74
Sh3d21Q7TSG5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Sh3d21Q7TSG5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.96■■■□□ 2.71
Sh3d21Q7TSG5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
Sh3d21Q7TSG5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.83■■■□□ 2.69
Sh3d21Q7TSG5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Sh3d21Q7TSG5 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.76■■■□□ 2.68
Sh3d21Q7TSG5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Sh3d21Q7TSG5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Sh3d21Q7TSG5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.66■■■□□ 2.66
Sh3d21Q7TSG5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Sh3d21Q7TSG5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Sh3d21Q7TSG5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Sh3d21Q7TSG5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Sh3d21Q7TSG5 Gm25238-201ENSMUST00000174914 89 ntBASIC31.5■■■□□ 2.63
Sh3d21Q7TSG5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.47■■■□□ 2.63
Sh3d21Q7TSG5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Sh3d21Q7TSG5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Sh3d21Q7TSG5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Sh3d21Q7TSG5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Sh3d21Q7TSG5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Sh3d21Q7TSG5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
Sh3d21Q7TSG5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
Sh3d21Q7TSG5 Gm27325-201ENSMUST00000175467 74 ntBASIC31.25■■■□□ 2.59
Sh3d21Q7TSG5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.18■■■□□ 2.58
Sh3d21Q7TSG5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Sh3d21Q7TSG5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.18■■■□□ 2.58
Sh3d21Q7TSG5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.17■■■□□ 2.58
Sh3d21Q7TSG5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
Sh3d21Q7TSG5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Sh3d21Q7TSG5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.11■■■□□ 2.57
Sh3d21Q7TSG5 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.02■■■□□ 2.56
Sh3d21Q7TSG5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
Sh3d21Q7TSG5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.94■■■□□ 2.54
Sh3d21Q7TSG5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Sh3d21Q7TSG5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Sh3d21Q7TSG5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Sh3d21Q7TSG5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Sh3d21Q7TSG5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.69■■■□□ 2.5
Sh3d21Q7TSG5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.68■■■□□ 2.5
Sh3d21Q7TSG5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Sh3d21Q7TSG5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.62■■■□□ 2.49
Sh3d21Q7TSG5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Sh3d21Q7TSG5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.49
Sh3d21Q7TSG5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.54■■■□□ 2.48
Sh3d21Q7TSG5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Sh3d21Q7TSG5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Sh3d21Q7TSG5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Sh3d21Q7TSG5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Sh3d21Q7TSG5 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Sh3d21Q7TSG5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
Sh3d21Q7TSG5 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Sh3d21Q7TSG5 Rab21-202ENSMUST00000218831 843 ntBASIC30.38■■■□□ 2.45
Sh3d21Q7TSG5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
Sh3d21Q7TSG5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Sh3d21Q7TSG5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Sh3d21Q7TSG5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
Sh3d21Q7TSG5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Sh3d21Q7TSG5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Sh3d21Q7TSG5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Sh3d21Q7TSG5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.22■■■□□ 2.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms