RNA–Protein interactions for RNA: ENSMUST00000057525.13

Trim3-201, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 3,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-201ENSMUST00000057525 Greb1lB9EJV3 1913 aa18.63■□□□□ 0.57
Trim3-201ENSMUST00000057525 NfkbibQ60778 359 aa18.63■□□□□ 0.57
Trim3-201ENSMUST00000057525 Adamtsl1Q8BLI0 1745 aa18.63■□□□□ 0.57
Trim3-201ENSMUST00000057525 Mybbp1aQ7TPV4 1344 aaKnown RBP18.63■□□□□ 0.57
Trim3-201ENSMUST00000057525 Ccdc85cE9Q6B2 420 aa18.63■□□□□ 0.57
Trim3-201ENSMUST00000057525 Slc39a11Q8BWY7 342 aa18.63■□□□□ 0.57
Trim3-201ENSMUST00000057525 AtrnQ9WU60 1428 aa18.62■□□□□ 0.57
Trim3-201ENSMUST00000057525 Nlrp1aQ2LKU9 1182 aa18.62■□□□□ 0.57
Trim3-201ENSMUST00000057525 Tfip11Q9ERA6 838 aaKnown RBP18.62■□□□□ 0.57
Trim3-201ENSMUST00000057525 Ccne2Q9Z238 404 aa18.62■□□□□ 0.57
Trim3-201ENSMUST00000057525 4931408C20RikE9PWP9 1381 aa18.62■□□□□ 0.57
Trim3-201ENSMUST00000057525 Col11a2Q64739 1736 aa18.62■□□□□ 0.57
Trim3-201ENSMUST00000057525 Erc2Q6PH08 957 aa18.61■□□□□ 0.57
Trim3-201ENSMUST00000057525 Ubr3Q5U430 1889 aa18.61■□□□□ 0.57
Trim3-201ENSMUST00000057525 Snrpa1P57784 255 aaKnown RBP18.61■□□□□ 0.57
Trim3-201ENSMUST00000057525 Tbc1d32Q3URV1 1296 aa18.61■□□□□ 0.57
Trim3-201ENSMUST00000057525 Ddx46Q569Z5 1032 aaKnown RBP18.61■□□□□ 0.57
Trim3-201ENSMUST00000057525 Slc38a10Q5I012 1090 aa18.61■□□□□ 0.57
Trim3-201ENSMUST00000057525 Lgr5Q9Z1P4 907 aa18.61■□□□□ 0.57
Trim3-201ENSMUST00000057525 Nucb1Q02819 459 aaKnown RBP18.6■□□□□ 0.57
Trim3-201ENSMUST00000057525 Gsdma2Q32M21 443 aa18.6■□□□□ 0.57
Trim3-201ENSMUST00000057525 Rbm26Q6NZN0 1012 aaKnown RBP18.6■□□□□ 0.57
Trim3-201ENSMUST00000057525 Ccdc6D3YZP9 469 aa18.59■□□□□ 0.57
Trim3-201ENSMUST00000057525 Slc4a1P04919 929 aa18.59■□□□□ 0.57
Trim3-201ENSMUST00000057525 Stk11ipQ3TAA7 1072 aa18.59■□□□□ 0.57
Trim3-201ENSMUST00000057525 Znf496Q5SXI5 585 aa18.59■□□□□ 0.57
Trim3-201ENSMUST00000057525 Tmem143Q8VD26 458 aa18.59■□□□□ 0.57
Trim3-201ENSMUST00000057525 Rbm27Q5SFM8 1060 aaKnown RBP18.59■□□□□ 0.57
Trim3-201ENSMUST00000057525 Ciao1Q99KN2 339 aa18.59■□□□□ 0.57
Trim3-201ENSMUST00000057525 Atp2b3Q0VF55 1220 aa18.58■□□□□ 0.57
Trim3-201ENSMUST00000057525 Ezh2Q61188 746 aaKnown RBP18.58■□□□□ 0.57
Trim3-201ENSMUST00000057525 NppbP40753 121 aa18.58■□□□□ 0.56
Trim3-201ENSMUST00000057525 IntuQ059U7 942 aa18.58■□□□□ 0.56
Trim3-201ENSMUST00000057525 Plekho1Q9JIY0 408 aa18.58■□□□□ 0.56
Trim3-201ENSMUST00000057525 Plch1Q4KWH5 1682 aa18.58■□□□□ 0.56
Trim3-201ENSMUST00000057525 Gm7347D3YYI9 267 aa18.58■□□□□ 0.56
Trim3-201ENSMUST00000057525 1700029H14RikE9PY36 240 aa18.58■□□□□ 0.56
Trim3-201ENSMUST00000057525 Kif23E9Q5G3 953 aa18.58■□□□□ 0.56
Trim3-201ENSMUST00000057525 Speer4aF8VPX6 267 aa18.58■□□□□ 0.56
Trim3-201ENSMUST00000057525 Rbbp8nlA2ABX0 614 aa18.57■□□□□ 0.56
Trim3-201ENSMUST00000057525 Fam102bQ8BQS4 339 aa18.57■□□□□ 0.56
Trim3-201ENSMUST00000057525 Golim4Q8BXA1 655 aa18.57■□□□□ 0.56
Trim3-201ENSMUST00000057525 Sytl4Q9R0Q1 673 aa18.57■□□□□ 0.56
Trim3-201ENSMUST00000057525 Casp1P29452 402 aa18.57■□□□□ 0.56
Trim3-201ENSMUST00000057525 Tshz3Q8CGV9 1081 aa18.57■□□□□ 0.56
Trim3-201ENSMUST00000057525 Ttc14Q9CSP9 761 aa18.57■□□□□ 0.56
Trim3-201ENSMUST00000057525 Pde8bE9Q4S1 865 aa18.56■□□□□ 0.56
Trim3-201ENSMUST00000057525 Celf1P28659 486 aaKnown RBP18.56■□□□□ 0.56
Trim3-201ENSMUST00000057525 IncenpQ9WU62 880 aa18.56■□□□□ 0.56
Trim3-201ENSMUST00000057525 Ppip5k2Q6ZQB6 1129 aa18.56■□□□□ 0.56
Trim3-201ENSMUST00000057525 Duox1A2AQ92 1551 aa18.55■□□□□ 0.56
Trim3-201ENSMUST00000057525 Anapc15-psA0A140T8L6 141 aa18.55■□□□□ 0.56
Trim3-201ENSMUST00000057525 Atp8a2P98200 1148 aa18.55■□□□□ 0.56
Trim3-201ENSMUST00000057525 Asap2Q7SIG6 958 aa18.55■□□□□ 0.56
Trim3-201ENSMUST00000057525 PnnO35691 725 aaKnown RBP18.55■□□□□ 0.56
Trim3-201ENSMUST00000057525 Apba2P98084 750 aa18.55■□□□□ 0.56
Trim3-201ENSMUST00000057525 NpeppsQ11011 920 aa18.55■□□□□ 0.56
Trim3-201ENSMUST00000057525 Sptlc3Q8BG54 563 aa18.55■□□□□ 0.56
Trim3-201ENSMUST00000057525 Pus3Q9JI38 481 aa18.55■□□□□ 0.56
Trim3-201ENSMUST00000057525 Kif13bA0A286YCV9 1847 aa18.55■□□□□ 0.56
Trim3-201ENSMUST00000057525 EvplQ9D952 2035 aa18.54■□□□□ 0.56
Trim3-201ENSMUST00000057525 HlfQ8BW74 295 aa18.54■□□□□ 0.56
Trim3-201ENSMUST00000057525 Sde2Q8K1J5 448 aaKnown RBP18.54■□□□□ 0.56
Trim3-201ENSMUST00000057525 TsksO54887 585 aa18.54■□□□□ 0.56
Trim3-201ENSMUST00000057525 Sf3b3Q921M3 1217 aaKnown RBP18.53■□□□□ 0.56
Trim3-201ENSMUST00000057525 Atxn2lQ7TQH0 1049 aaKnown RBP18.53■□□□□ 0.56
Trim3-201ENSMUST00000057525 Plekhf1Q3TB82 279 aa18.52■□□□□ 0.56
Trim3-201ENSMUST00000057525 Naa16Q9DBB4 864 aa18.52■□□□□ 0.56
Trim3-201ENSMUST00000057525 Mdm2P23804 489 aa18.52■□□□□ 0.56
Trim3-201ENSMUST00000057525 Krt25Q8VCW2 446 aa18.52■□□□□ 0.56
Trim3-201ENSMUST00000057525 Rps8P62242 208 aaKnown RBP18.52■□□□□ 0.55
Trim3-201ENSMUST00000057525 Plbd2Q3TCN2 594 aa18.52■□□□□ 0.55
Trim3-201ENSMUST00000057525 Tnpo1Q8BFY9 898 aaKnown RBP18.52■□□□□ 0.55
Trim3-201ENSMUST00000057525 Col23a1Q8K4G2 532 aa18.52■□□□□ 0.55
Trim3-201ENSMUST00000057525 TnksQ6PFX9 1320 aa18.51■□□□□ 0.55
Trim3-201ENSMUST00000057525 Adarb2Q9JI20 745 aa18.51■□□□□ 0.55
Trim3-201ENSMUST00000057525 Col22a1E9Q7P1 1613 aa18.51■□□□□ 0.55
Trim3-201ENSMUST00000057525 Dok7Q18PE0 504 aa18.51■□□□□ 0.55
Trim3-201ENSMUST00000057525 Ufl1Q8CCJ3 793 aaKnown RBP18.51■□□□□ 0.55
Trim3-201ENSMUST00000057525 Nphp3Q7TNH6 1325 aa18.51■□□□□ 0.55
Trim3-201ENSMUST00000057525 Pram1Q6BCL1 675 aa18.5■□□□□ 0.55
Trim3-201ENSMUST00000057525 Slc51aQ8R000 340 aa18.5■□□□□ 0.55
Trim3-201ENSMUST00000057525 Mlh1Q9JK91 760 aa18.5■□□□□ 0.55
Trim3-201ENSMUST00000057525 Tbc1d8Q9Z1A9 1134 aa18.5■□□□□ 0.55
Trim3-201ENSMUST00000057525 Ube4aE9Q735 1028 aa18.5■□□□□ 0.55
Trim3-201ENSMUST00000057525 NfixP70257 488 aa18.5■□□□□ 0.55
Trim3-201ENSMUST00000057525 Prom2Q3UUY6 835 aa18.5■□□□□ 0.55
Trim3-201ENSMUST00000057525 Sept1P42209 366 aa18.49■□□□□ 0.55
Trim3-201ENSMUST00000057525 Tmem266Q8BZB3 538 aa18.49■□□□□ 0.55
Trim3-201ENSMUST00000057525 Chmp4cQ9D7F7 232 aa18.49■□□□□ 0.55
Trim3-201ENSMUST00000057525 Znfx1Q8R151 1909 aaKnown RBP18.49■□□□□ 0.55
Trim3-201ENSMUST00000057525 Jakmip1Q8BVL9 626 aa18.49■□□□□ 0.55
Trim3-201ENSMUST00000057525 McamQ8R2Y2 648 aaKnown RBP18.49■□□□□ 0.55
Trim3-201ENSMUST00000057525 St5Q924W7 1134 aa18.49■□□□□ 0.55
Trim3-201ENSMUST00000057525 Oas2E9Q9A9 742 aa18.49■□□□□ 0.55
Trim3-201ENSMUST00000057525 Sh3tc1G3X9F6 1346 aa18.49■□□□□ 0.55
Trim3-201ENSMUST00000057525 Nlrp9aQ66X03 949 aa18.49■□□□□ 0.55
Trim3-201ENSMUST00000057525 Ipo9Q91YE6 1041 aa18.49■□□□□ 0.55
Trim3-201ENSMUST00000057525 Pmfbp1Q9WVQ0 1022 aa18.49■□□□□ 0.55
Trim3-201ENSMUST00000057525 Rabep1O35551 862 aa18.48■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 42.5 ms