RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Leo1Q5XJE5 667 aa29.47■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Rnf214Q8BFU3 668 aaKnown RBP29.47■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Zscan25B2RX31 543 aa29.46■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Dhx16G3X8X0 1044 aaKnown RBP29.46■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Gsdma2Q32M21 443 aa29.46■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Kcnn1Q9EQR3 537 aa29.46■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Ltb4r2Q9JJL9 360 aa29.46■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Pip4k2bQ80XI4 416 aa29.45■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Zscan22Q8BGS5 496 aa29.45■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Usp44Q8C2S0 711 aa29.45■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Ciao1Q99KN2 339 aa29.45■■■□□ 2.31
Cldnd1-201ENSMUST00000023426 Gm12185Q5NCB2 835 aa29.45■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Kank4Q6P9J5 1016 aa29.45■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Nap1l3Q794H2 544 aa29.45■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Tmem266Q8BZB3 538 aa29.45■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Rdm1Q9CQK3 281 aa29.45■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Mad1l1Q9WTX8 717 aaKnown RBP29.45■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Ltbp4Q8K4G1 1666 aa29.44■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Ccdc173A0JLY1 547 aa29.44■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Eya2O08575 532 aa29.44■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Ddx46Q569Z5 1032 aaKnown RBP29.44■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Rrs1Q9CYH6 365 aaKnown RBP29.44■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Ppp1r10Q80W00 888 aaKnown RBP29.44■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Mb21d2Q8C525 428 aa29.44■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Tceanc2Q8R2M0 207 aa29.44■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 E4f1Q8CCE9 783 aa29.43■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Nup88Q8CEC0 753 aaKnown RBP29.43■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Abca3Q8R420 1704 aa29.42■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Stat1P42225 749 aa29.42■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 ZyxQ62523 564 aa29.42■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Ccdc66Q6NS45 935 aa29.42■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Samm50Q8BGH2 469 aa29.42■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Lrrfip2Q91WK0 415 aa29.42■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 PdcQ9QW08 244 aa29.42■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Col4a1P02463 1669 aa29.41■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Irgm2A0A140LIF8 407 aa29.41■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Gnl3lQ6PGG6 577 aaKnown RBP29.41■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Krt25Q8VCW2 446 aa29.41■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 EappQ5BU09 281 aa29.41■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Tsr2Q8C8T8 191 aa29.41■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Npc1l1Q6T3U4 1333 aa29.4■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Pard3Q99NH2 1333 aa29.4■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Timm10P62073 90 aa29.4■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Chmp3Q9CQ10 224 aa29.4■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Ppil4Q9CXG3 492 aaKnown RBP29.4■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Ush1cQ9ES64 910 aa29.4■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Zfp51Q3U4L8 781 aa29.39■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Asap2Q7SIG6 958 aa29.39■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Wdr24Q8CFJ9 790 aa29.39■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Esyt1Q3U7R1 1092 aaKnown RBP29.39■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Golim4Q8BXA1 655 aa29.39■■■□□ 2.3
Cldnd1-201ENSMUST00000023426 Cd22P35329 862 aa29.38■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 Pcmtd1P59913 357 aa29.38■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 Ankib1Q6ZPS6 1085 aa29.38■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 Naa30Q8CES0 364 aa29.38■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 Crb1Q8VHS2 1405 aa29.38■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 Chd1lQ9CXF7 900 aa29.38■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 Olfml1Q8BSH2 233 aa29.37■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 Ptcd1Q8C2E4 695 aaKnown RBP29.37■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 Pde3aQ9Z0X4 1141 aa29.37■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 NpeppsQ11011 920 aa29.36■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 Me3Q8BMF3 604 aa29.36■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 ZwintQ9CQU5 252 aa29.36■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 Smg7Q5RJH6 1138 aaKnown RBP29.36■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 Klhl34A2AI76 644 aa29.35■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 Ctdnep1Q3TP92 244 aa29.35■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 Babam1Q3UI43 333 aa29.35■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 Kdm3aQ6PCM1 1323 aa29.35■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 Becn1O88597 448 aa29.35■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 Acsbg1Q99PU5 721 aa29.35■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 Ccdc129Q14B48 1034 aa29.34■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 Cnnm3Q32NY4 713 aa29.34■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 Iffo2Q8R2V2 512 aa29.34■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 PappaQ8R4K8 1624 aa29.34■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 Ttc19Q8CC21 365 aa29.33■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 TrdnE9Q9K5 693 aa29.33■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 Ccnl1Q52KE7 532 aaKnown RBP29.33■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 Ccdc158Q8CDI6 1109 aa29.33■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 Ppp4r3bQ922R5 820 aa29.33■■■□□ 2.29
Cldnd1-201ENSMUST00000023426 Shank3Q4ACU6 1730 aa29.32■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Prl7a2O54831 253 aa29.32■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Nol10Q5RJG1 687 aaKnown RBP29.32■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 R3hcc1Q8BSI6 488 aa29.32■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Sh3bp5Q9Z131 463 aa29.32■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Srgap1Q91Z69 1062 aa29.32■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Gigyf1Q99MR1 1044 aaKnown RBP29.32■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Cap2Q9CYT6 476 aa29.32■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Wdr33Q8K4P0 1330 aaKnown RBP29.31■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Cyp2d10P24456 504 aa29.31■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Anp32cQ64G17 123 aa29.31■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Plcd1Q8R3B1 756 aa29.31■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Sytl4Q9R0Q1 673 aa29.31■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Gm21985Q6P6P5 1106 aa29.3■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Rassf8Q8CJ96 419 aa29.3■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Dnajc5P60904 198 aa29.3■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Limch1Q3UH68 1057 aa29.3■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Pus3Q9JI38 481 aa29.3■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Krt85Q9Z2T6 507 aa29.3■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Hspd1P63038 573 aaKnown RBP29.29■■■□□ 2.28
Cldnd1-201ENSMUST00000023426 Ccdc162pQ0VG85 912 aa29.29■■■□□ 2.28
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms