RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 PIGAP37287 484 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 PRKAG1P54619 331 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 PSMD4P55036 377 aaKnown RBP5.26□□□□□ -1.57
SCAF11-213ENST00000550629 EEFSECP57772 596 aaKnown RBP5.26□□□□□ -1.57
SCAF11-213ENST00000550629 MLF1P58340 268 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 PSG6Q00889 435 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 RBBP4Q09028 425 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 ZNF155Q12901 538 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-213ENST00000550629 MFAP5Q13361 173 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 LASP1Q14847 261 aaKnown RBP5.26□□□□□ -1.57
SCAF11-213ENST00000550629 RGNQ15493 299 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 DUSP5Q16690 384 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 DECR1Q16698 335 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 MEP1AQ16819 746 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 ZNF630Q2M218 657 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-213ENST00000550629 DEFB109BQ30KR1 87 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 DNAL1Q4LDG9 190 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 PIGGQ5H8A4 983 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.26□□□□□ -1.57
SCAF11-213ENST00000550629 ATP1A1-AS1Q5TC04 95 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 HEPHL1Q6MZM0 1159 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 OPN5Q6U736 354 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 IGFL2Q6UWQ7 119 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 IGFL3Q6UXB1 125 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 ISLR2Q6UXK2 745 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 SZRD1Q7Z422 152 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 NET1Q7Z628 596 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-213ENST00000550629 YTHDF3Q7Z739 585 aaKnown RBP5.26□□□□□ -1.57
SCAF11-213ENST00000550629 RPS19BP1Q86WX3 136 aaKnown RBP5.26□□□□□ -1.57
SCAF11-213ENST00000550629 RNF130Q86XS8 419 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 FAM90A1Q86YD7 464 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 SLC44A2Q8IWA5 706 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-213ENST00000550629 SLC30A8Q8IWU4 369 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 PGAM4Q8N0Y7 254 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 KIF2BQ8N4N8 673 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 HORMAD2Q8N7B1 307 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 ZNF321PQ8N8H1 164 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 COX18Q8N8Q8 333 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 BOLLQ8N9W6 283 aaKnown RBP5.26□□□□□ -1.57
SCAF11-213ENST00000550629 CHDHQ8NE62 594 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-213ENST00000550629 TNIP2Q8NFZ5 429 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 OR5AK3PQ8NH89 298 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 FAM110BQ8TC76 370 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 BRIX1Q8TDN6 353 aaKnown RBP5.26□□□□□ -1.57
SCAF11-213ENST00000550629 GPR151Q8TDV0 419 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 ADAMTS15Q8TE58 950 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 TM9SF4Q92544 642 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 AURKBQ96GD4 344 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-213ENST00000550629 REXO5Q96IC2 774 aaKnown RBP5.26□□□□□ -1.57
SCAF11-213ENST00000550629 MAGED4Q96JG8 741 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 SGCZQ96LD1 299 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 TRNT1Q96Q11 434 aaKnown RBP5.26□□□□□ -1.57
SCAF11-213ENST00000550629 GAL3ST4Q96RP7 486 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 SECISBP2Q96T21 854 aaKnown RBP5.26□□□□□ -1.57
SCAF11-213ENST00000550629 THUMPD3Q9BV44 507 aaKnown RBP5.26□□□□□ -1.57
SCAF11-213ENST00000550629 ITPAQ9BY32 194 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 HOXD1Q9GZZ0 328 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 NXF5Q9H1B4 397 aaKnown RBP5.26□□□□□ -1.57
SCAF11-213ENST00000550629 TMEM38AQ9H6F2 299 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 TRIM45Q9H8W5 580 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-213ENST00000550629 CPNE5Q9HCH3 593 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 A4GALTQ9NPC4 353 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 EQTNQ9NQ60 294 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 MRPS18AQ9NVS2 196 aaKnown RBP5.26□□□□□ -1.57
SCAF11-213ENST00000550629 RLIMQ9NVW2 624 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 GPR83Q9NYM4 423 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 CALML5Q9NZT1 146 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 ABCD2Q9UBJ2 740 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 OR10H1Q9Y4A9 318 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 ACACBO00763 2458 aa5.26□□□□□ -1.57
SCAF11-213ENST00000550629 OR6C70A6NIJ9 312 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 A8MUI8 341 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 A8MVJ9 347 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 MKRN2OSH3BPM6 223 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 SLC16A6O15403 523 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 STX11O75558 287 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 OR2J2O76002 312 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 NADKO95544 446 aaPredicted RBP5.25□□□□□ -1.57
SCAF11-213ENST00000550629 CELA2AP08217 269 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 TFPTP0C1Z6 253 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 ACP2P11117 423 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 SFTPCP11686 197 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 ETFAP13804 333 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 HSD17B1P14061 328 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 ABCD3P28288 659 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 GABRA3P34903 492 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 PCGF2P35227 344 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 KRT20P35900 424 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 CRATP43155 626 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 HLCSP50747 726 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 SSR4P51571 173 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 PNLIPRP2P54317 469 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 DSTNP60981 165 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 PSME3P61289 254 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 RPP38P78345 283 aaKnown RBP5.25□□□□□ -1.57
SCAF11-213ENST00000550629 HPCAP84074 193 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 PLCXD2Q0VAA5 305 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 SNTA1Q13424 505 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 VEZF1Q14119 521 aa5.25□□□□□ -1.57
SCAF11-213ENST00000550629 EFR3AQ14156 821 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms