RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A YHR202WP38887 602 aa8.94□□□□□ -0.98
TGA1tA(UGC)A ULI1P43604 169 aa8.94□□□□□ -0.98
TGA1tA(UGC)A ASN1P49089 572 aaKnown RBP8.94□□□□□ -0.98
TGA1tA(UGC)A ALT2P52892 507 aa8.94□□□□□ -0.98
TGA1tA(UGC)A SHE10P53075 577 aa8.94□□□□□ -0.98
TGA1tA(UGC)A YGL081WP53156 320 aa8.94□□□□□ -0.98
TGA1tA(UGC)A YGR130CP53278 816 aa8.94□□□□□ -0.98
TGA1tA(UGC)A DAL7P21826 554 aa8.93□□□□□ -0.98
TGA1tA(UGC)A SSD1P24276 1250 aaKnown RBP RIP-Chip data8.93□□□□□ -0.98not detected
TGA1tA(UGC)A RSA4P25382 515 aaKnown RBP8.93□□□□□ -0.98
TGA1tA(UGC)A CDC15P27636 974 aa8.93□□□□□ -0.98
TGA1tA(UGC)A CYS3P31373 394 aaKnown RBP8.93□□□□□ -0.98
TGA1tA(UGC)A CSE2P33308 149 aa8.93□□□□□ -0.98
TGA1tA(UGC)A LCB2P40970 561 aa8.93□□□□□ -0.98
TGA1tA(UGC)A YPT11P48559 417 aa8.93□□□□□ -0.98
TGA1tA(UGC)A VID30P53076 958 aa8.93□□□□□ -0.98
TGA1tA(UGC)A RPL4AP10664 362 aaKnown RBP8.92□□□□□ -0.98
TGA1tA(UGC)A SYN8P31377 255 aa8.92□□□□□ -0.98
TGA1tA(UGC)A MMS4P38257 691 aa8.92□□□□□ -0.98
TGA1tA(UGC)A YEL023CP39992 682 aa8.92□□□□□ -0.98
TGA1tA(UGC)A CIR1P42940 261 aa8.92□□□□□ -0.98
TGA1tA(UGC)A RPL4BP49626 362 aaKnown RBP8.92□□□□□ -0.98
TGA1tA(UGC)A DNL4Q08387 944 aaPredicted RBP8.92□□□□□ -0.98
TGA1tA(UGC)A DAP1Q12091 152 aa8.92□□□□□ -0.98
TGA1tA(UGC)A YKT6P36015 200 aaKnown RBP8.91□□□□□ -0.98
TGA1tA(UGC)A HEL1P36113 551 aa8.91□□□□□ -0.98
TGA1tA(UGC)A SAF1P38352 637 aa8.91□□□□□ -0.98
TGA1tA(UGC)A UBP5P39944 805 aa8.91□□□□□ -0.98
TGA1tA(UGC)A NPP2P39997 493 aa8.91□□□□□ -0.98
TGA1tA(UGC)A FAF1P40546 346 aaPredicted RBP8.91□□□□□ -0.98
TGA1tA(UGC)A YFL034WP43564 1073 aa8.91□□□□□ -0.98
TGA1tA(UGC)A YJL045WP47052 634 aa8.91□□□□□ -0.98
TGA1tA(UGC)A EEB1Q02891 456 aa8.91□□□□□ -0.98
TGA1tA(UGC)A PUS1Q12211 544 aaKnown RBP8.91□□□□□ -0.98
TGA1tA(UGC)A KEX1P09620 729 aa8.9□□□□□ -0.98
TGA1tA(UGC)A CCL1P37366 393 aa8.9□□□□□ -0.98
TGA1tA(UGC)A CCT5P40413 562 aaKnown RBP8.9□□□□□ -0.98
TGA1tA(UGC)A ALG11P53954 548 aaKnown RBP8.9□□□□□ -0.98
TGA1tA(UGC)A SCP160P06105 1222 aaKnown RBP RIP-Chip data8.89□□□□□ -0.99not detected
TGA1tA(UGC)A GPA1P08539 472 aa8.89□□□□□ -0.99
TGA1tA(UGC)A VMA1P17255 1071 aaKnown RBP8.89□□□□□ -0.99
TGA1tA(UGC)A SEC21P32074 935 aaKnown RBP8.89□□□□□ -0.99
TGA1tA(UGC)A RAD54P32863 898 aa8.89□□□□□ -0.99
TGA1tA(UGC)A TRM2P33753 639 aa8.89□□□□□ -0.99
TGA1tA(UGC)A GCS1P35197 352 aa8.89□□□□□ -0.99
TGA1tA(UGC)A HMT1P38074 348 aa8.89□□□□□ -0.99
TGA1tA(UGC)A PTC4P38089 393 aa8.89□□□□□ -0.99
TGA1tA(UGC)A YER130CP39959 443 aa8.89□□□□□ -0.99
TGA1tA(UGC)A LSC2P53312 427 aa8.89□□□□□ -0.99
TGA1tA(UGC)A HAP5Q02516 242 aa8.89□□□□□ -0.99
TGA1tA(UGC)A RCR2Q03446 210 aaKnown RBP8.89□□□□□ -0.99
TGA1tA(UGC)A DON1Q05610 365 aa8.89□□□□□ -0.99
TGA1tA(UGC)A SHS1Q07657 551 aa8.89□□□□□ -0.99
TGA1tA(UGC)A YPL216WQ08964 1102 aa8.89□□□□□ -0.99
TGA1tA(UGC)A PKH2Q12236 1081 aaKnown RBP8.89□□□□□ -0.99
TGA1tA(UGC)A MED1Q12321 566 aa8.89□□□□□ -0.99
TGA1tA(UGC)A OSH2Q12451 1283 aa8.89□□□□□ -0.99
TGA1tA(UGC)A AIM44Q99299 758 aa8.89□□□□□ -0.99
TGA1tA(UGC)A PRR1P28708 518 aa8.88□□□□□ -0.99
TGA1tA(UGC)A XDJ1P39102 459 aa8.88□□□□□ -0.99
TGA1tA(UGC)A MGA2P40578 1113 aa8.88□□□□□ -0.99
TGA1tA(UGC)A OYE3P41816 400 aaPredicted RBP8.88□□□□□ -0.99
TGA1tA(UGC)A CCM1P48237 864 aaPredicted RBP8.88□□□□□ -0.99
TGA1tA(UGC)A SNU56Q03782 492 aaKnown RBP8.88□□□□□ -0.99
TGA1tA(UGC)A SPO71Q03868 1245 aa8.88□□□□□ -0.99
TGA1tA(UGC)A MRF1P30775 413 aaPredicted RBP8.87□□□□□ -0.99
TGA1tA(UGC)A MUD1P32605 298 aaKnown RBP8.87□□□□□ -0.99
TGA1tA(UGC)A PEP7P32609 515 aa8.87□□□□□ -0.99
TGA1tA(UGC)A YBR284WP38150 797 aa8.87□□□□□ -0.99
TGA1tA(UGC)A APM2P38700 605 aa8.87□□□□□ -0.99
TGA1tA(UGC)A BCD1P38772 366 aa8.87□□□□□ -0.99
TGA1tA(UGC)A YHR054CP38780 354 aa8.87□□□□□ -0.99
TGA1tA(UGC)A TOS3P43637 560 aa8.87□□□□□ -0.99
TGA1tA(UGC)A SCD6P45978 349 aaKnown RBP RIP-Chip data8.87□□□□□ -0.99not detected
TGA1tA(UGC)A KRE33P53914 1056 aaKnown RBP8.87□□□□□ -0.99
TGA1tA(UGC)A YOL075CQ08234 1294 aa8.87□□□□□ -0.99
TGA1tA(UGC)A MRN1Q08925 612 aaKnown RBP RIP-Chip data8.87□□□□□ -0.99not detected
TGA1tA(UGC)A CTF3Q12748 733 aa8.87□□□□□ -0.99
TGA1tA(UGC)A HAP2P06774 265 aa8.86□□□□□ -0.99
TGA1tA(UGC)A ASP3-2P0CX77 362 aa8.86□□□□□ -0.99
TGA1tA(UGC)A ASP3-3P0CX78 362 aa8.86□□□□□ -0.99
TGA1tA(UGC)A ASP3-4P0CX79 362 aa8.86□□□□□ -0.99
TGA1tA(UGC)A ASP3-1P0CZ17 362 aa8.86□□□□□ -0.99
TGA1tA(UGC)A MAK16P10962 306 aaPredicted RBP8.86□□□□□ -0.99
TGA1tA(UGC)A SCJ1P25303 377 aa8.86□□□□□ -0.99
TGA1tA(UGC)A YKL091CP33324 310 aaKnown RBP8.86□□□□□ -0.99
TGA1tA(UGC)A VPS24P36095 224 aaKnown RBP8.86□□□□□ -0.99
TGA1tA(UGC)A CCC2P38995 1004 aa8.86□□□□□ -0.99
TGA1tA(UGC)A YIR016WP40572 265 aa8.86□□□□□ -0.99
TGA1tA(UGC)A FIG4P42837 879 aa8.86□□□□□ -0.99
TGA1tA(UGC)A AIP1P46680 615 aaKnown RBP8.86□□□□□ -0.99
TGA1tA(UGC)A HSH155P49955 971 aaKnown RBP8.86□□□□□ -0.99
TGA1tA(UGC)A STB4P50104 949 aa8.86□□□□□ -0.99
TGA1tA(UGC)A UTP14Q04500 899 aaKnown RBP8.86□□□□□ -0.99
TGA1tA(UGC)A PIG1Q06216 648 aa8.86□□□□□ -0.99
TGA1tA(UGC)A MRI1Q06489 411 aaKnown RBP8.86□□□□□ -0.99
TGA1tA(UGC)A ESC8Q08119 714 aa8.86□□□□□ -0.99
TGA1tA(UGC)A MMF1P40185 145 aaKnown RBP8.85□□□□□ -0.99
TGA1tA(UGC)A DAS1P47005 663 aa8.85□□□□□ -0.99
TGA1tA(UGC)A SPC98P53540 846 aa8.85□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms