RNA–Protein interactions for RNA: YPR094W

RDS3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene RDS3, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDS3YPR094W CCT7P42943 550 aaKnown RBP0.93□□□□□ -2.26
RDS3YPR094W GIS2P53849 153 aaKnown RBP RIP-Chip data0.93□□□□□ -2.26not detected
RDS3YPR094W RIA1P53893 1110 aa0.93□□□□□ -2.26
RDS3YPR094W MPS1P54199 764 aa0.93□□□□□ -2.26
RDS3YPR094W APM1Q00776 475 aaPredicted RBP0.93□□□□□ -2.26
RDS3YPR094W NAB6Q03735 1134 aaKnown RBP RIP-Chip data0.93□□□□□ -2.26 RIP-Chip
RDS3YPR094W CRR1Q05790 422 aa0.93□□□□□ -2.26
RDS3YPR094W IRC13Q08630 104 aa0.93□□□□□ -2.26
RDS3YPR094W OSW1Q08692 278 aa0.93□□□□□ -2.26
RDS3YPR094W MSC6Q08818 692 aaKnown RBP0.93□□□□□ -2.26
RDS3YPR094W TAF3Q12297 353 aa0.93□□□□□ -2.26
RDS3YPR094W NOT3P06102 836 aaKnown RBP0.92□□□□□ -2.26
RDS3YPR094W PTP1P25044 335 aa0.92□□□□□ -2.26
RDS3YPR094W DMC1P25453 334 aa0.92□□□□□ -2.26
RDS3YPR094W RAD27P26793 382 aa0.92□□□□□ -2.26
RDS3YPR094W RPC82P32349 654 aa0.92□□□□□ -2.26
RDS3YPR094W CDC12P32468 407 aaKnown RBP0.92□□□□□ -2.26
RDS3YPR094W LYP1P32487 611 aa0.92□□□□□ -2.26
RDS3YPR094W DUT1P33317 147 aa0.92□□□□□ -2.26
RDS3YPR094W YKL107WP34251 309 aa0.92□□□□□ -2.26
RDS3YPR094W GGA2P38817 585 aaKnown RBP0.92□□□□□ -2.26
RDS3YPR094W YJL206CP39529 758 aa0.92□□□□□ -2.26
RDS3YPR094W YEL020CP39994 560 aa0.92□□□□□ -2.26
RDS3YPR094W NET1P47035 1189 aa0.92□□□□□ -2.26
RDS3YPR094W GYP7P48365 746 aa0.92□□□□□ -2.26
RDS3YPR094W EEB1Q02891 456 aa0.92□□□□□ -2.26
RDS3YPR094W SEG1Q04279 960 aa0.92□□□□□ -2.26
RDS3YPR094W ASM4Q05166 528 aa0.92□□□□□ -2.26
RDS3YPR094W YPR196WQ06595 470 aa0.92□□□□□ -2.26
RDS3YPR094W RTT10Q08924 1013 aa0.92□□□□□ -2.26
RDS3YPR094W SWM1Q12379 170 aa0.92□□□□□ -2.26
RDS3YPR094W RKM4Q12504 494 aa0.92□□□□□ -2.26
RDS3YPR094W VPS34P22543 875 aa0.91□□□□□ -2.26
RDS3YPR094W STE13P33894 931 aa0.91□□□□□ -2.26
RDS3YPR094W UBS1P38290 277 aa0.91□□□□□ -2.26
RDS3YPR094W TSL1P38427 1098 aaKnown RBP0.91□□□□□ -2.26
RDS3YPR094W CTF8P38877 133 aa0.91□□□□□ -2.26
RDS3YPR094W RSP5P39940 809 aaKnown RBP0.91□□□□□ -2.26
RDS3YPR094W YIL108WP40483 696 aaKnown RBP0.91□□□□□ -2.26
RDS3YPR094W XBP1P40489 647 aa0.91□□□□□ -2.26
RDS3YPR094W TYW3P53177 273 aa0.91□□□□□ -2.26
RDS3YPR094W DAM1P53267 343 aa0.91□□□□□ -2.26
RDS3YPR094W SMX3P54999 86 aaPredicted RBP0.91□□□□□ -2.26
RDS3YPR094W SPR28Q04921 423 aa0.91□□□□□ -2.26
RDS3YPR094W YLR225CQ05948 407 aaKnown RBP0.91□□□□□ -2.26
RDS3YPR094W ESC2Q06340 456 aa0.91□□□□□ -2.26
RDS3YPR094W SGO1Q08490 590 aa0.91□□□□□ -2.26
RDS3YPR094W ERG11P10614 530 aa0.9□□□□□ -2.27
RDS3YPR094W NPP1P25353 742 aa0.9□□□□□ -2.27
RDS3YPR094W HIS7P33734 552 aaKnown RBP0.9□□□□□ -2.27
RDS3YPR094W HRB1P38922 454 aaKnown RBP RIP-Chip data0.9□□□□□ -2.27not detected
RDS3YPR094W VHR1P40522 640 aa0.9□□□□□ -2.27
RDS3YPR094W AMA1P50082 593 aa0.9□□□□□ -2.27
RDS3YPR094W YKE2P52553 114 aa0.9□□□□□ -2.27
RDS3YPR094W SSL2Q00578 843 aa0.9□□□□□ -2.27
RDS3YPR094W TMA46Q12000 345 aaKnown RBP0.9□□□□□ -2.27
RDS3YPR094W YLR149CQ99296 730 aa0.9□□□□□ -2.27
RDS3YPR094W RPN13O13563 156 aa0.89□□□□□ -2.27
RDS3YPR094W PHR1P05066 565 aaKnown RBP RIP-Chip data0.89□□□□□ -2.27not detected
RDS3YPR094W MPH2P0CD99 609 aa0.89□□□□□ -2.27
RDS3YPR094W CDC48P25694 835 aaKnown RBP0.89□□□□□ -2.27
RDS3YPR094W AFR1P33304 620 aa0.89□□□□□ -2.27
RDS3YPR094W YBR238CP38330 731 aaKnown RBP0.89□□□□□ -2.27
RDS3YPR094W BCD1P38772 366 aa0.89□□□□□ -2.27
RDS3YPR094W SSF1P38789 453 aaPredicted RBP0.89□□□□□ -2.27
RDS3YPR094W IPL1P38991 367 aa0.89□□□□□ -2.27
RDS3YPR094W STM1P39015 273 aaKnown RBP0.89□□□□□ -2.27
RDS3YPR094W MBP1P39678 833 aa0.89□□□□□ -2.27
RDS3YPR094W PAC2P39937 518 aa0.89□□□□□ -2.27
RDS3YPR094W FMP52P40008 231 aa0.89□□□□□ -2.27
RDS3YPR094W LTP1P40347 161 aa0.89□□□□□ -2.27
RDS3YPR094W HOS4P40480 1083 aa0.89□□□□□ -2.27
RDS3YPR094W YIR042CP40586 236 aa0.89□□□□□ -2.27
RDS3YPR094W UBC11P52492 156 aa0.89□□□□□ -2.27
RDS3YPR094W TEL2P53038 688 aa0.89□□□□□ -2.27
RDS3YPR094W ASI2P53895 289 aa0.89□□□□□ -2.27
RDS3YPR094W YPL068CQ02749 293 aa0.89□□□□□ -2.27
RDS3YPR094W SRP1Q02821 542 aaKnown RBP0.89□□□□□ -2.27
RDS3YPR094W PGK1P00560 416 aaKnown RBP0.88□□□□□ -2.27
RDS3YPR094W NUP1P20676 1076 aa0.88□□□□□ -2.27
RDS3YPR094W HIR1P32479 840 aa0.88□□□□□ -2.27
RDS3YPR094W YKR078WP36158 585 aaKnown RBP0.88□□□□□ -2.27
RDS3YPR094W YHR078WP38799 552 aa0.88□□□□□ -2.27
RDS3YPR094W NDC80P40460 691 aa0.88□□□□□ -2.27
RDS3YPR094W FYV10P40492 516 aa0.88□□□□□ -2.27
RDS3YPR094W CEP3P40969 608 aa0.88□□□□□ -2.27
RDS3YPR094W HDA1P53973 706 aa0.88□□□□□ -2.27
RDS3YPR094W YKR011CQ02209 353 aa0.88□□□□□ -2.27
RDS3YPR094W DUS3Q06053 668 aaKnown RBP0.88□□□□□ -2.27
RDS3YPR094W TGL5Q12043 749 aa0.88□□□□□ -2.27
RDS3YPR094W RLF2Q12495 606 aa0.88□□□□□ -2.27
RDS3YPR094W LAT1P12695 482 aaKnown RBP0.87□□□□□ -2.27
RDS3YPR094W APN1P22936 367 aa0.87□□□□□ -2.27
RDS3YPR094W ABD1P32783 436 aaPredicted RBP0.87□□□□□ -2.27
RDS3YPR094W TYE7P33122 291 aaPredicted RBP0.87□□□□□ -2.27
RDS3YPR094W PIN4P34217 668 aaKnown RBP RIP-Chip data0.87□□□□□ -2.27not detected
RDS3YPR094W GLG1P36143 616 aa0.87□□□□□ -2.27
RDS3YPR094W ERT1P38140 529 aa0.87□□□□□ -2.27
RDS3YPR094W HSV2P50079 448 aaPredicted RBP0.87□□□□□ -2.27
RDS3YPR094W UBC9P50623 157 aaPredicted RBP0.87□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms