RNA–Protein interactions for RNA: YPR010C

RPA135, Transcript of RNA polymerase I second largest subunit A135, yeastyeast

Gene RPA135, Length 3,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA135YPR010C CLF1Q12309 687 aaPredicted RBP3.63□□□□□ -1.83
RPA135YPR010C IXR1P33417 597 aa3.63□□□□□ -1.83
RPA135YPR010C PIN4P34217 668 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
RPA135YPR010C DEF1P35732 738 aaKnown RBP3.63□□□□□ -1.83
RPA135YPR010C REG2P38232 338 aa3.63□□□□□ -1.83
RPA135YPR010C GAA1P39012 614 aa3.63□□□□□ -1.83
RPA135YPR010C LIF1P53150 421 aa3.63□□□□□ -1.83
RPA135YPR010C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83 RIP-Chip
RPA135YPR010C INA17Q02888 182 aa3.63□□□□□ -1.83
RPA135YPR010C TLG1Q03322 224 aa3.63□□□□□ -1.83
RPA135YPR010C CWC15Q03772 175 aaKnown RBP3.63□□□□□ -1.83
RPA135YPR010C APL5Q08951 932 aaKnown RBP3.63□□□□□ -1.83
RPA135YPR010C SLX4Q12098 748 aa3.63□□□□□ -1.83
RPA135YPR010C GAL2P13181 574 aa3.62□□□□□ -1.83
RPA135YPR010C YEL1P34225 687 aa3.62□□□□□ -1.83
RPA135YPR010C YKL050CP35736 922 aa3.62□□□□□ -1.83
RPA135YPR010C SMF1P38925 575 aa3.62□□□□□ -1.83
RPA135YPR010C STR2P47164 639 aa3.62□□□□□ -1.83
RPA135YPR010C NCS2P53923 493 aaPredicted RBP3.62□□□□□ -1.83
RPA135YPR010C VPS16Q03308 798 aa3.62□□□□□ -1.83
RPA135YPR010C YPR078CQ06813 372 aa3.62□□□□□ -1.83
RPA135YPR010C PMD1P32634 1753 aa3.62□□□□□ -1.83
RPA135YPR010C ENO2P00925 437 aaKnown RBP3.62□□□□□ -1.83
RPA135YPR010C PAP1P29468 568 aaKnown RBP3.62□□□□□ -1.83
RPA135YPR010C HIR1P32479 840 aa3.62□□□□□ -1.83
RPA135YPR010C OCT1P35999 772 aa3.62□□□□□ -1.83
RPA135YPR010C TCD1P38756 429 aa3.62□□□□□ -1.83
RPA135YPR010C NBP1P52919 319 aaPredicted RBP3.62□□□□□ -1.83
RPA135YPR010C BTN2P53286 410 aa3.62□□□□□ -1.83
RPA135YPR010C FPK1P53739 893 aa3.62□□□□□ -1.83
RPA135YPR010C VAC14Q06708 880 aa3.62□□□□□ -1.83
RPA135YPR010C SHS1Q07657 551 aa3.62□□□□□ -1.83
RPA135YPR010C MCM16Q12262 181 aa3.62□□□□□ -1.83
RPA135YPR010C RIM15P43565 1770 aa3.62□□□□□ -1.83
RPA135YPR010C SRD1P09007 221 aa3.62□□□□□ -1.83
RPA135YPR010C YEL076C-AP0CX16 216 aa3.62□□□□□ -1.83
RPA135YPR010C YLR464WP0CX17 216 aa3.62□□□□□ -1.83
RPA135YPR010C ESS1P22696 170 aa3.62□□□□□ -1.83
RPA135YPR010C GPI10P30777 616 aa3.62□□□□□ -1.83
RPA135YPR010C PGM1P33401 570 aaKnown RBP3.62□□□□□ -1.83
RPA135YPR010C HXT5P38695 592 aa3.62□□□□□ -1.83
RPA135YPR010C VPS29P38759 282 aa3.62□□□□□ -1.83
RPA135YPR010C MNN1P39106 762 aa3.62□□□□□ -1.83
RPA135YPR010C YEL076CP39971 216 aa3.62□□□□□ -1.83
RPA135YPR010C EAF5P39995 279 aa3.62□□□□□ -1.83
RPA135YPR010C YEN1P40028 759 aa3.62□□□□□ -1.83
RPA135YPR010C RPS7BP48164 190 aaKnown RBP3.62□□□□□ -1.83
RPA135YPR010C TCB2P48231 1178 aa3.62□□□□□ -1.83
RPA135YPR010C RIM21P48565 533 aa3.62□□□□□ -1.83
RPA135YPR010C PSP2P50109 593 aaKnown RBP3.62□□□□□ -1.83
RPA135YPR010C RET3P53600 189 aa3.62□□□□□ -1.83
RPA135YPR010C ORC4P54791 529 aa3.62□□□□□ -1.83
RPA135YPR010C MFM1Q02783 413 aa3.62□□□□□ -1.83
RPA135YPR010C OSH2Q12451 1283 aa3.62□□□□□ -1.83
RPA135YPR010C MRM1P25270 412 aa3.61□□□□□ -1.83
RPA135YPR010C DEP1P31385 405 aa3.61□□□□□ -1.83
RPA135YPR010C UTR4P32626 227 aa3.61□□□□□ -1.83
RPA135YPR010C BNA1P47096 177 aa3.61□□□□□ -1.83
RPA135YPR010C YGR153WP48238 217 aa3.61□□□□□ -1.83
RPA135YPR010C ZPR1P53303 486 aaKnown RBP3.61□□□□□ -1.83
RPA135YPR010C UBX4P54730 416 aa3.61□□□□□ -1.83
RPA135YPR010C URH1Q04179 340 aa3.61□□□□□ -1.83
RPA135YPR010C ENT2Q05785 613 aa3.61□□□□□ -1.83
RPA135YPR010C SDH5Q08230 162 aa3.61□□□□□ -1.83
RPA135YPR010C OSW2Q12202 724 aa3.61□□□□□ -1.83
RPA135YPR010C YKL068W-AQ3E826 78 aa3.61□□□□□ -1.83
RPA135YPR010C NOP14Q99207 810 aaKnown RBP3.61□□□□□ -1.83
RPA135YPR010C CDC33P07260 213 aaKnown RBP3.61□□□□□ -1.83
RPA135YPR010C HOP09932 586 aa3.61□□□□□ -1.83
RPA135YPR010C CDC60P26637 1090 aaKnown RBP3.61□□□□□ -1.83
RPA135YPR010C MRX3P38172 270 aa3.61□□□□□ -1.83
RPA135YPR010C VFA1P40080 203 aa3.61□□□□□ -1.83
RPA135YPR010C ECM23Q02710 187 aa3.61□□□□□ -1.83
RPA135YPR010C YLR455WQ06188 304 aa3.61□□□□□ -1.83
RPA135YPR010C MIP1P15801 1254 aa3.61□□□□□ -1.83
RPA135YPR010C SPC110P32380 944 aa3.61□□□□□ -1.83
RPA135YPR010C RRN3P36070 627 aa3.61□□□□□ -1.83
RPA135YPR010C EXO5P38289 585 aa3.61□□□□□ -1.83
RPA135YPR010C EFM2P38347 419 aa3.61□□□□□ -1.83
RPA135YPR010C VAB2P40003 282 aa3.61□□□□□ -1.83
RPA135YPR010C SAD1P43589 448 aa3.61□□□□□ -1.83
RPA135YPR010C SGM1P47166 707 aa3.61□□□□□ -1.83
RPA135YPR010C BRO1P48582 844 aa3.61□□□□□ -1.83
RPA135YPR010C CPR6P53691 371 aaKnown RBP3.61□□□□□ -1.83
RPA135YPR010C SPR28Q04921 423 aa3.61□□□□□ -1.83
RPA135YPR010C YDL057WQ07379 328 aa3.61□□□□□ -1.83
RPA135YPR010C PPR1P07272 904 aaPredicted RBP3.6□□□□□ -1.83
RPA135YPR010C IME1P21190 360 aa3.6□□□□□ -1.83
RPA135YPR010C DAL2P25335 343 aa3.6□□□□□ -1.83
RPA135YPR010C RAD27P26793 382 aa3.6□□□□□ -1.83
RPA135YPR010C EFB1P32471 206 aaKnown RBP3.6□□□□□ -1.83
RPA135YPR010C BYE1P36106 594 aa3.6□□□□□ -1.83
RPA135YPR010C TBS1P38114 1094 aa3.6□□□□□ -1.83
RPA135YPR010C PAN5P38787 379 aa3.6□□□□□ -1.83
RPA135YPR010C BOL3P39724 118 aa3.6□□□□□ -1.83
RPA135YPR010C CEP3P40969 608 aa3.6□□□□□ -1.83
RPA135YPR010C AIP1P46680 615 aaKnown RBP3.6□□□□□ -1.83
RPA135YPR010C RPC17P47076 161 aa3.6□□□□□ -1.83
RPA135YPR010C ERG5P54781 538 aa3.6□□□□□ -1.83
RPA135YPR010C TIM8P57744 87 aa3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms