RNA–Protein interactions for RNA: YPL031C

PHO85, Transcript of Cyclin-dependent kinase, yeast

Gene PHO85, Length 918 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PHO85	YPL031C	GAL2	P13181	574 aa		7.52	□□□□□ -1.21
PHO85	YPL031C	DBP5	P20449	482 aa	Known RBP	7.52	□□□□□ -1.21
PHO85	YPL031C	OLA1	P38219	394 aa	Known RBP	7.52	□□□□□ -1.21
PHO85	YPL031C	TDA3	P38758	523 aa		7.52	□□□□□ -1.21
PHO85	YPL031C	RRD1	P40454	393 aa	Known RBP	7.52	□□□□□ -1.21
PHO85	YPL031C	SDS3	P40505	327 aa		7.52	□□□□□ -1.21
PHO85	YPL031C	FIS1	P40515	155 aa		7.52	□□□□□ -1.21
PHO85	YPL031C	HXT8	P40886	569 aa		7.52	□□□□□ -1.21
PHO85	YPL031C	LCB2	P40970	561 aa		7.52	□□□□□ -1.21
PHO85	YPL031C	CTR1	P49573	406 aa		7.52	□□□□□ -1.21
PHO85	YPL031C	JJJ1	P53863	590 aa		7.52	□□□□□ -1.21
PHO85	YPL031C	TIM8	P57744	87 aa		7.52	□□□□□ -1.21
PHO85	YPL031C	RNT1	Q02555	471 aa		7.52	□□□□□ -1.21
PHO85	YPL031C	VTC3	Q02725	835 aa		7.52	□□□□□ -1.21
PHO85	YPL031C	YML082W	Q04533	649 aa	Known RBP	7.52	□□□□□ -1.21
PHO85	YPL031C	PHM6	Q05637	104 aa		7.52	□□□□□ -1.21
PHO85	YPL031C	YOR223W	Q12015	292 aa		7.52	□□□□□ -1.21
PHO85	YPL031C	FBP1	P09201	348 aa		7.51	□□□□□ -1.21
PHO85	YPL031C	CDC48	P25694	835 aa	Known RBP	7.51	□□□□□ -1.21
PHO85	YPL031C	GCG1	P32656	232 aa	Known RBP	7.51	□□□□□ -1.21
PHO85	YPL031C	TGL1	P34163	548 aa		7.51	□□□□□ -1.21
PHO85	YPL031C	LAS1	P36146	502 aa	Predicted RBP	7.51	□□□□□ -1.21
PHO85	YPL031C	ERC1	P38767	581 aa		7.51	□□□□□ -1.21
PHO85	YPL031C	RPC17	P47076	161 aa		7.51	□□□□□ -1.21
PHO85	YPL031C	YJR079W	P47126	109 aa		7.51	□□□□□ -1.21
PHO85	YPL031C	HUL5	P53119	910 aa		7.51	□□□□□ -1.21
PHO85	YPL031C	PEX29	Q03370	554 aa		7.51	□□□□□ -1.21
PHO85	YPL031C	ECI1	Q05871	280 aa		7.51	□□□□□ -1.21
PHO85	YPL031C	STE23	Q06010	1027 aa		7.51	□□□□□ -1.21
PHO85	YPL031C	SUB2	Q07478	446 aa	Known RBP	7.51	□□□□□ -1.21
PHO85	YPL031C	NCR1	Q12200	1170 aa		7.51	□□□□□ -1.21
PHO85	YPL031C	SPT2	P06843	333 aa	Predicted RBP	7.5	□□□□□ -1.21
PHO85	YPL031C	TCP1	P12612	559 aa	Known RBP	7.5	□□□□□ -1.21
PHO85	YPL031C	YSC83	P32792	385 aa		7.5	□□□□□ -1.21
PHO85	YPL031C	SHP1	P34223	423 aa		7.5	□□□□□ -1.21
PHO85	YPL031C	ATG19	P35193	415 aa		7.5	□□□□□ -1.21
PHO85	YPL031C	SPP381	P38282	291 aa	Predicted RBP	7.5	□□□□□ -1.21
PHO85	YPL031C	FIG4	P42837	879 aa		7.5	□□□□□ -1.21
PHO85	YPL031C	FPK1	P53739	893 aa		7.5	□□□□□ -1.21
PHO85	YPL031C	YMR018W	Q04364	514 aa		7.5	□□□□□ -1.21
PHO85	YPL031C	SPH1	Q06160	661 aa		7.5	□□□□□ -1.21
PHO85	YPL031C	RLP24	Q07915	199 aa	Known RBP	7.5	□□□□□ -1.21
PHO85	YPL031C	SLX4	Q12098	748 aa		7.5	□□□□□ -1.21
PHO85	YPL031C	CSR2	Q12734	1121 aa		7.5	□□□□□ -1.21
PHO85	YPL031C	NAM7	P30771	971 aa	Known RBP	7.49	□□□□□ -1.21
PHO85	YPL031C	UBC6	P33296	250 aa	Predicted RBP	7.49	□□□□□ -1.21
PHO85	YPL031C	BLI1	P35727	113 aa		7.49	□□□□□ -1.21
PHO85	YPL031C	EXO5	P38289	585 aa		7.49	□□□□□ -1.21
PHO85	YPL031C	YJL007C	P47080	104 aa		7.49	□□□□□ -1.21
PHO85	YPL031C	ZPR1	P53303	486 aa	Known RBP	7.49	□□□□□ -1.21
PHO85	YPL031C	ESBP6	P53918	673 aa		7.49	□□□□□ -1.21
PHO85	YPL031C	SYH1	Q02875	849 aa	Known RBP	7.49	□□□□□ -1.21
PHO85	YPL031C	YMR102C	Q03177	834 aa		7.49	□□□□□ -1.21
PHO85	YPL031C	DUS3	Q06053	668 aa	Known RBP	7.49	□□□□□ -1.21
PHO85	YPL031C	CUR1	Q06469	252 aa		7.49	□□□□□ -1.21
PHO85	YPL031C	UBX5	Q06682	500 aa		7.49	□□□□□ -1.21
PHO85	YPL031C	GUD1	Q07729	489 aa		7.49	□□□□□ -1.21
PHO85	YPL031C	NOC3	Q07896	663 aa	Predicted RBP	7.49	□□□□□ -1.21
PHO85	YPL031C	AIM41	Q12032	185 aa		7.49	□□□□□ -1.21
PHO85	YPL031C	SPO21	Q12411	609 aa		7.49	□□□□□ -1.21
PHO85	YPL031C	THS1	P04801	734 aa	Known RBP	7.48	□□□□□ -1.21
PHO85	YPL031C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	7.48	□□□□□ -1.21	not detected
PHO85	YPL031C	MUD1	P32605	298 aa	Known RBP	7.48	□□□□□ -1.21
PHO85	YPL031C	RAD54	P32863	898 aa		7.48	□□□□□ -1.21
PHO85	YPL031C	MCR1	P36060	302 aa	Known RBP	7.48	□□□□□ -1.21
PHO85	YPL031C	TRZ1	P36159	838 aa	Predicted RBP	7.48	□□□□□ -1.21
PHO85	YPL031C	RCK2	P38623	610 aa		7.48	□□□□□ -1.21
PHO85	YPL031C	KAP123	P40069	1113 aa	Known RBP	7.48	□□□□□ -1.21
PHO85	YPL031C	YNL320W	P42840	284 aa		7.48	□□□□□ -1.21
PHO85	YPL031C	ATG36	P46983	293 aa		7.48	□□□□□ -1.21
PHO85	YPL031C	BRO1	P48582	844 aa		7.48	□□□□□ -1.21
PHO85	YPL031C	YGR130C	P53278	816 aa		7.48	□□□□□ -1.21
PHO85	YPL031C	PTA1	Q01329	785 aa	Predicted RBP	7.48	□□□□□ -1.21
PHO85	YPL031C	CEF1	Q03654	590 aa	Predicted RBP	7.48	□□□□□ -1.21
PHO85	YPL031C	YLR462W	O13556	202 aa		7.47	□□□□□ -1.21
PHO85	YPL031C	ARG4	P04076	463 aa	Predicted RBP	7.47	□□□□□ -1.21
PHO85	YPL031C	CDC33	P07260	213 aa	Known RBP	7.47	□□□□□ -1.21
PHO85	YPL031C	KIP1	P28742	1111 aa		7.47	□□□□□ -1.21
PHO85	YPL031C	CBF2	P32504	956 aa		7.47	□□□□□ -1.21
PHO85	YPL031C	RRT2	P38332	387 aa		7.47	□□□□□ -1.21
PHO85	YPL031C	YHL049C	P38722	271 aa		7.47	□□□□□ -1.21
PHO85	YPL031C	YEL075C	P39972	122 aa		7.47	□□□□□ -1.21
PHO85	YPL031C	LCP5	P40079	357 aa	Predicted RBP	7.47	□□□□□ -1.21
PHO85	YPL031C	YER189W	P40104	122 aa		7.47	□□□□□ -1.21
PHO85	YPL031C	PSY2	P40164	858 aa		7.47	□□□□□ -1.21
PHO85	YPL031C	YFL064C	P43540	174 aa		7.47	□□□□□ -1.21
PHO85	YPL031C	VPS53	P47061	822 aa		7.47	□□□□□ -1.21
PHO85	YPL031C	AVT1	P47082	602 aa		7.47	□□□□□ -1.21
PHO85	YPL031C	TAM41	P53230	385 aa		7.47	□□□□□ -1.21
PHO85	YPL031C	RIO1	Q12196	484 aa	Known RBP	7.47	□□□□□ -1.21
PHO85	YPL031C	YDL206W	Q12424	762 aa		7.47	□□□□□ -1.21
PHO85	YPL031C	YBL111C	Q3E7Y5	667 aa		7.47	□□□□□ -1.21
PHO85	YPL031C	TY1B-A	O13527	1196 aa	Known RBP	7.46	□□□□□ -1.22
PHO85	YPL031C	SNF1	P06782	633 aa	Known RBP	7.46	□□□□□ -1.22
PHO85	YPL031C	PRP9	P19736	530 aa	Known RBP	7.46	□□□□□ -1.22
PHO85	YPL031C	YDJ1	P25491	409 aa	Known RBP	7.46	□□□□□ -1.22
PHO85	YPL031C	PER1	P25625	357 aa		7.46	□□□□□ -1.22
PHO85	YPL031C	CDC11	P32458	415 aa		7.46	□□□□□ -1.22
PHO85	YPL031C	RTG2	P32608	588 aa	Known RBP	7.46	□□□□□ -1.22
PHO85	YPL031C	UTR4	P32626	227 aa		7.46	□□□□□ -1.22

Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms