RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C PEX8P53248 589 aa5.29□□□□□ -1.56
VPS21YOR089C VPS72Q03388 795 aa5.29□□□□□ -1.56
VPS21YOR089C CEF1Q03654 590 aaPredicted RBP5.29□□□□□ -1.56
VPS21YOR089C SSY1Q03770 852 aa5.29□□□□□ -1.56
VPS21YOR089C YPR196WQ06595 470 aa5.29□□□□□ -1.56
VPS21YOR089C MDM38Q08179 573 aa5.29□□□□□ -1.56
VPS21YOR089C RSB1Q08417 382 aa5.29□□□□□ -1.56
VPS21YOR089C NSI1Q12457 570 aa5.29□□□□□ -1.56
VPS21YOR089C ATP4P05626 244 aa5.28□□□□□ -1.56
VPS21YOR089C MPH2P0CD99 609 aa5.28□□□□□ -1.56
VPS21YOR089C FUN30P31380 1131 aa5.28□□□□□ -1.56
VPS21YOR089C YBR071WP38243 211 aa5.28□□□□□ -1.56
VPS21YOR089C YBR238CP38330 731 aaKnown RBP5.28□□□□□ -1.56
VPS21YOR089C DOT6P40059 670 aaKnown RBP5.28□□□□□ -1.56
VPS21YOR089C GYP8P43570 497 aa5.28□□□□□ -1.56
VPS21YOR089C SNP1Q00916 300 aaPredicted RBP5.28□□□□□ -1.56
VPS21YOR089C MET7Q08645 548 aa5.28□□□□□ -1.56
VPS21YOR089C TRE1Q08919 783 aa5.28□□□□□ -1.56
VPS21YOR089C ENV7Q12003 364 aa5.28□□□□□ -1.56
VPS21YOR089C YTM1Q12024 460 aaPredicted RBP5.28□□□□□ -1.56
VPS21YOR089C NYV1Q12255 253 aa5.28□□□□□ -1.56
VPS21YOR089C SNF5P18480 905 aa5.27□□□□□ -1.57
VPS21YOR089C RFA1P22336 621 aaKnown RBP5.27□□□□□ -1.57
VPS21YOR089C NPP1P25353 742 aa5.27□□□□□ -1.57
VPS21YOR089C EUG1P32474 517 aa5.27□□□□□ -1.57
VPS21YOR089C HOG1P32485 435 aa5.27□□□□□ -1.57
VPS21YOR089C PRP19P32523 503 aaKnown RBP5.27□□□□□ -1.57
VPS21YOR089C AFR1P33304 620 aa5.27□□□□□ -1.57
VPS21YOR089C MDL2P33311 773 aa5.27□□□□□ -1.57
VPS21YOR089C TSL1P38427 1098 aaKnown RBP5.27□□□□□ -1.57
VPS21YOR089C YHL012WP38709 493 aa5.27□□□□□ -1.57
VPS21YOR089C NMD3P38861 518 aaKnown RBP5.27□□□□□ -1.57
VPS21YOR089C CKB2P38930 258 aa5.27□□□□□ -1.57
VPS21YOR089C NAB3P38996 802 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
VPS21YOR089C DAS1P47005 663 aa5.27□□□□□ -1.57
VPS21YOR089C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
VPS21YOR089C PEX14P53112 341 aa5.27□□□□□ -1.57
VPS21YOR089C GPG1P53130 126 aa5.27□□□□□ -1.57
VPS21YOR089C ORC3P54790 616 aa5.27□□□□□ -1.57
VPS21YOR089C SRT1Q03175 343 aa5.27□□□□□ -1.57
VPS21YOR089C MTQ2Q03920 221 aaPredicted RBP5.27□□□□□ -1.57
VPS21YOR089C OSW2Q12202 724 aa5.27□□□□□ -1.57
VPS21YOR089C THO2P53552 1597 aaKnown RBP5.26□□□□□ -1.57
VPS21YOR089C SSK2P53599 1579 aa5.26□□□□□ -1.57
VPS21YOR089C BI4P03879 638 aa5.26□□□□□ -1.57
VPS21YOR089C ADP1P25371 1049 aa5.26□□□□□ -1.57
VPS21YOR089C PWP2P25635 923 aaKnown RBP5.26□□□□□ -1.57
VPS21YOR089C YKL151CP36059 337 aa5.26□□□□□ -1.57
VPS21YOR089C GPP1P41277 250 aaKnown RBP5.26□□□□□ -1.57
VPS21YOR089C MET13P53128 600 aa5.26□□□□□ -1.57
VPS21YOR089C NOG2P53742 486 aaKnown RBP5.26□□□□□ -1.57
VPS21YOR089C VPS30Q02948 557 aa5.26□□□□□ -1.57
VPS21YOR089C GIN4Q12263 1142 aa5.26□□□□□ -1.57
VPS21YOR089C KAR1P11927 433 aa5.25□□□□□ -1.57
VPS21YOR089C YCR015CP25616 317 aa5.25□□□□□ -1.57
VPS21YOR089C THI80P35202 319 aa5.25□□□□□ -1.57
VPS21YOR089C MCD4P36051 919 aa5.25□□□□□ -1.57
VPS21YOR089C GZF3P42944 551 aaKnown RBP5.25□□□□□ -1.57
VPS21YOR089C DUG1P43616 481 aaKnown RBP5.25□□□□□ -1.57
VPS21YOR089C YJR120WP47157 116 aa5.25□□□□□ -1.57
VPS21YOR089C PRP43P53131 767 aaKnown RBP5.25□□□□□ -1.57
VPS21YOR089C NHX1Q04121 633 aa5.25□□□□□ -1.57
VPS21YOR089C GUP2Q08929 609 aa5.25□□□□□ -1.57
VPS21YOR089C ACE2P21192 770 aa5.24□□□□□ -1.57
VPS21YOR089C AEP2P22136 580 aa5.24□□□□□ -1.57
VPS21YOR089C PCM1P38628 557 aaKnown RBP5.24□□□□□ -1.57
VPS21YOR089C TAF1P46677 1066 aa5.24□□□□□ -1.57
VPS21YOR089C YJR096WP47137 282 aa5.24□□□□□ -1.57
VPS21YOR089C YKE2P52553 114 aa5.24□□□□□ -1.57
VPS21YOR089C COG6P53959 839 aa5.24□□□□□ -1.57
VPS21YOR089C ESC8Q08119 714 aa5.24□□□□□ -1.57
VPS21YOR089C BUD4P47136 1447 aa5.23□□□□□ -1.57
VPS21YOR089C RPS9AO13516 197 aaKnown RBP5.23□□□□□ -1.57
VPS21YOR089C VPS24P36095 224 aaKnown RBP5.23□□□□□ -1.57
VPS21YOR089C TRZ1P36159 838 aaPredicted RBP5.23□□□□□ -1.57
VPS21YOR089C ERT1P38140 529 aa5.23□□□□□ -1.57
VPS21YOR089C HSL7P38274 827 aa5.23□□□□□ -1.57
VPS21YOR089C GIC1P38785 314 aa5.23□□□□□ -1.57
VPS21YOR089C PMC1P38929 1173 aaPredicted RBP5.23□□□□□ -1.57
VPS21YOR089C PEA2P40091 420 aa5.23□□□□□ -1.57
VPS21YOR089C ALY2P47029 1046 aa5.23□□□□□ -1.57
VPS21YOR089C SND1Q04007 877 aa5.23□□□□□ -1.57
VPS21YOR089C ATG33Q06485 197 aa5.23□□□□□ -1.57
VPS21YOR089C RSC58Q07979 502 aa5.23□□□□□ -1.57
VPS21YOR089C SVS1Q12254 260 aa5.23□□□□□ -1.57
VPS21YOR089C YDL177CQ12257 170 aa5.23□□□□□ -1.57
VPS21YOR089C DID4P36108 232 aa5.22□□□□□ -1.57
VPS21YOR089C PTC7P38797 343 aa5.22□□□□□ -1.57
VPS21YOR089C RLP7P40693 322 aaKnown RBP5.22□□□□□ -1.57
VPS21YOR089C SHR5P41912 237 aa5.22□□□□□ -1.57
VPS21YOR089C MTC3P53077 123 aa5.22□□□□□ -1.57
VPS21YOR089C YOR378WQ08902 515 aa5.22□□□□□ -1.57
VPS21YOR089C DIF1O13577 133 aa5.21□□□□□ -1.58
VPS21YOR089C SAM35P14693 329 aa5.21□□□□□ -1.58
VPS21YOR089C YEF3P16521 1044 aaKnown RBP5.21□□□□□ -1.58
VPS21YOR089C DAL7P21826 554 aa5.21□□□□□ -1.58
VPS21YOR089C PER1P25625 357 aa5.21□□□□□ -1.58
VPS21YOR089C SAP190P36123 1033 aa5.21□□□□□ -1.58
VPS21YOR089C OAF1P39720 1047 aaPredicted RBP5.21□□□□□ -1.58
VPS21YOR089C EMP65P40085 556 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms