RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB4	YOL112W	PCD1	Q12524	340 aa		10.43	□□□□□ -0.74
MSB4	YOL112W	YLR422W	Q06409	1932 aa		10.43	□□□□□ -0.74
MSB4	YOL112W	YAP1801	P38856	637 aa		10.42	□□□□□ -0.74
MSB4	YOL112W	SNF7	P39929	240 aa	Known RBP	10.42	□□□□□ -0.74
MSB4	YOL112W	SPO74	P45819	413 aa		10.42	□□□□□ -0.74
MSB4	YOL112W	YNL134C	P53912	376 aa	Known RBP	10.42	□□□□□ -0.74
MSB4	YOL112W	MAG2	Q06436	670 aa	Known RBP	10.42	□□□□□ -0.74
MSB4	YOL112W	RPL4A	P10664	362 aa	Known RBP	10.42	□□□□□ -0.74
MSB4	YOL112W	ATE1	P16639	503 aa		10.42	□□□□□ -0.74
MSB4	YOL112W	MRX3	P38172	270 aa		10.42	□□□□□ -0.74
MSB4	YOL112W	PSY4	P38193	441 aa		10.42	□□□□□ -0.74
MSB4	YOL112W	YHL026C	P38740	315 aa		10.42	□□□□□ -0.74
MSB4	YOL112W	JHD1	P40034	492 aa		10.42	□□□□□ -0.74
MSB4	YOL112W	LAM5	P43560	674 aa		10.42	□□□□□ -0.74
MSB4	YOL112W	ASN1	P49089	572 aa	Known RBP	10.42	□□□□□ -0.74
MSB4	YOL112W	RPL4B	P49626	362 aa	Known RBP	10.42	□□□□□ -0.74
MSB4	YOL112W	SHS1	Q07657	551 aa		10.42	□□□□□ -0.74
MSB4	YOL112W	MUD1	P32605	298 aa	Known RBP	10.41	□□□□□ -0.74
MSB4	YOL112W	MSC7	P38694	644 aa		10.41	□□□□□ -0.74
MSB4	YOL112W	EBS1	Q03466	884 aa	Known RBP	10.41	□□□□□ -0.74
MSB4	YOL112W	UTP14	Q04500	899 aa	Known RBP	10.41	□□□□□ -0.74
MSB4	YOL112W	YAP7	Q08182	245 aa		10.41	□□□□□ -0.74
MSB4	YOL112W	MAK16	P10962	306 aa	Predicted RBP	10.4	□□□□□ -0.74
MSB4	YOL112W	SKG6	P32900	734 aa	Predicted RBP	10.4	□□□□□ -0.74
MSB4	YOL112W	RPT1	P33299	467 aa	Known RBP	10.4	□□□□□ -0.74
MSB4	YOL112W	ADE17	P38009	592 aa	Known RBP	10.4	□□□□□ -0.74
MSB4	YOL112W	SHE10	P53075	577 aa		10.4	□□□□□ -0.74
MSB4	YOL112W	EAR1	Q03212	550 aa		10.4	□□□□□ -0.74
MSB4	YOL112W	GFD1	Q04839	188 aa	Known RBP	10.4	□□□□□ -0.74
MSB4	YOL112W	MLH2	Q07980	695 aa		10.4	□□□□□ -0.74
MSB4	YOL112W	TMA16	Q08687	178 aa		10.4	□□□□□ -0.74
MSB4	YOL112W	MRC1	P25588	1096 aa		10.39	□□□□□ -0.75
MSB4	YOL112W	RKM3	P38222	552 aa		10.39	□□□□□ -0.75
MSB4	YOL112W	MMS4	P38257	691 aa		10.39	□□□□□ -0.75
MSB4	YOL112W	SLX1	P38324	304 aa		10.39	□□□□□ -0.75
MSB4	YOL112W	RSC8	P43609	557 aa	Known RBP	10.39	□□□□□ -0.75
MSB4	YOL112W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	10.39	□□□□□ -0.75	not detected
MSB4	YOL112W	HSH155	P49955	971 aa	Known RBP	10.39	□□□□□ -0.75
MSB4	YOL112W	TIM8	P57744	87 aa		10.39	□□□□□ -0.75
MSB4	YOL112W	YOR022C	Q12204	715 aa		10.39	□□□□□ -0.75
MSB4	YOL112W	CDC37	P06101	506 aa	Known RBP	10.38	□□□□□ -0.75
MSB4	YOL112W	TAF13	P11747	167 aa		10.38	□□□□□ -0.75
MSB4	YOL112W	CHS2	P14180	963 aa		10.38	□□□□□ -0.75
MSB4	YOL112W	VMA1	P17255	1071 aa	Known RBP	10.38	□□□□□ -0.75
MSB4	YOL112W	KNS1	P32350	737 aa	Predicted RBP	10.38	□□□□□ -0.75
MSB4	YOL112W	CSE2	P33308	149 aa		10.38	□□□□□ -0.75
MSB4	YOL112W	BUD2	P33314	1104 aa		10.38	□□□□□ -0.75
MSB4	YOL112W	RPC25	P35718	212 aa		10.38	□□□□□ -0.75
MSB4	YOL112W	YET1	P35723	206 aa		10.38	□□□□□ -0.75
MSB4	YOL112W	NPP2	P39997	493 aa		10.38	□□□□□ -0.75
MSB4	YOL112W	OPT1	P40897	799 aa		10.38	□□□□□ -0.75
MSB4	YOL112W	ULI1	P43604	169 aa		10.38	□□□□□ -0.75
MSB4	YOL112W	DON1	Q05610	365 aa		10.38	□□□□□ -0.75
MSB4	YOL112W	HCR1	Q05775	265 aa	Known RBP	10.38	□□□□□ -0.75
MSB4	YOL112W	FAL1	Q12099	399 aa	Known RBP	10.38	□□□□□ -0.75
MSB4	YOL112W	TIF1	P10081	395 aa	Known RBP	10.37	□□□□□ -0.75
MSB4	YOL112W	PRR1	P28708	518 aa		10.37	□□□□□ -0.75
MSB4	YOL112W	YER186C	P40101	306 aa		10.37	□□□□□ -0.75
MSB4	YOL112W	ESL1	P40456	1118 aa		10.37	□□□□□ -0.75
MSB4	YOL112W	ALT2	P52892	507 aa		10.37	□□□□□ -0.75
MSB4	YOL112W	WAR1	Q03631	944 aa		10.37	□□□□□ -0.75
MSB4	YOL112W	SKY1	Q03656	742 aa		10.37	□□□□□ -0.75
MSB4	YOL112W	EMI2	Q04409	500 aa	Known RBP	10.37	□□□□□ -0.75
MSB4	YOL112W	RSC1	P53236	928 aa		10.36	□□□□□ -0.75
MSB4	YOL112W	ALG11	P53954	548 aa	Known RBP	10.36	□□□□□ -0.75
MSB4	YOL112W	YVH1	Q02256	364 aa	Known RBP	10.36	□□□□□ -0.75
MSB4	YOL112W	YLR455W	Q06188	304 aa		10.36	□□□□□ -0.75
MSB4	YOL112W	RLP24	Q07915	199 aa	Known RBP	10.36	□□□□□ -0.75
MSB4	YOL112W	MSD1	P15179	658 aa	Known RBP	10.36	□□□□□ -0.75
MSB4	YOL112W	RSA4	P25382	515 aa	Known RBP	10.36	□□□□□ -0.75
MSB4	YOL112W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	10.36	□□□□□ -0.75	not detected
MSB4	YOL112W	PNG1	Q02890	363 aa		10.36	□□□□□ -0.75
MSB4	YOL112W	COG4	Q06096	861 aa		10.36	□□□□□ -0.75
MSB4	YOL112W	SLX4	Q12098	748 aa		10.36	□□□□□ -0.75
MSB4	YOL112W	PTC4	P38089	393 aa		10.35	□□□□□ -0.75
MSB4	YOL112W	ISM1	P48526	1002 aa		10.35	□□□□□ -0.75
MSB4	YOL112W	CWC21	Q03375	135 aa	Known RBP	10.35	□□□□□ -0.75
MSB4	YOL112W	SPO75	Q07798	868 aa		10.35	□□□□□ -0.75
MSB4	YOL112W	OSH2	Q12451	1283 aa		10.35	□□□□□ -0.75
MSB4	YOL112W	IME1	P21190	360 aa		10.34	□□□□□ -0.75
MSB4	YOL112W	ADK2	P26364	225 aa		10.34	□□□□□ -0.75
MSB4	YOL112W	TRM2	P33753	639 aa		10.34	□□□□□ -0.75
MSB4	YOL112W	HEL1	P36113	551 aa		10.34	□□□□□ -0.75
MSB4	YOL112W	SHM1	P37292	490 aa	Predicted RBP	10.34	□□□□□ -0.75
MSB4	YOL112W	STB4	P50104	949 aa		10.34	□□□□□ -0.75
MSB4	YOL112W	EEB1	Q02891	456 aa		10.34	□□□□□ -0.75
MSB4	YOL112W	SNU56	Q03782	492 aa	Known RBP	10.34	□□□□□ -0.75
MSB4	YOL112W	PRC1	P00729	532 aa		10.33	□□□□□ -0.76
MSB4	YOL112W	ASP3-2	P0CX77	362 aa		10.33	□□□□□ -0.76
MSB4	YOL112W	ASP3-3	P0CX78	362 aa		10.33	□□□□□ -0.76
MSB4	YOL112W	ASP3-4	P0CX79	362 aa		10.33	□□□□□ -0.76
MSB4	YOL112W	ASP3-1	P0CZ17	362 aa		10.33	□□□□□ -0.76
MSB4	YOL112W	YKL023W	P36103	277 aa	Known RBP	10.33	□□□□□ -0.76
MSB4	YOL112W	FIG4	P42837	879 aa		10.33	□□□□□ -0.76
MSB4	YOL112W	MCM6	P53091	1017 aa	Known RBP	10.33	□□□□□ -0.76
MSB4	YOL112W	SPP1	Q03012	353 aa		10.33	□□□□□ -0.76
MSB4	YOL112W	GIR2	Q03768	265 aa	Predicted RBP	10.33	□□□□□ -0.76
MSB4	YOL112W	PUS1	Q12211	544 aa	Known RBP	10.33	□□□□□ -0.76
MSB4	YOL112W	RPS6A	P0CX37	236 aa	Known RBP	10.32	□□□□□ -0.76
MSB4	YOL112W	RPS6B	P0CX38	236 aa	Predicted RBP	10.32	□□□□□ -0.76

Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms