RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	PHM6	Q05637	104 aa		3.43	□□□□□ -1.86
SKP2	YNL311C	PGK1	P00560	416 aa	Known RBP	3.42	□□□□□ -1.86
SKP2	YNL311C	HSF1	P10961	833 aa		3.42	□□□□□ -1.86
SKP2	YNL311C	RSA4	P25382	515 aa	Known RBP	3.42	□□□□□ -1.86
SKP2	YNL311C	DUG2	P38149	878 aa		3.42	□□□□□ -1.86
SKP2	YNL311C	PAN5	P38787	379 aa		3.42	□□□□□ -1.86
SKP2	YNL311C	NMD2	P38798	1089 aa	Known RBP	3.42	□□□□□ -1.86
SKP2	YNL311C	GIP4	P39732	760 aa		3.42	□□□□□ -1.86
SKP2	YNL311C	SAD1	P43589	448 aa		3.42	□□□□□ -1.86
SKP2	YNL311C	NAM8	Q00539	523 aa	Known RBP	3.42	□□□□□ -1.86
SKP2	YNL311C	GDE1	Q02979	1223 aa		3.42	□□□□□ -1.86
SKP2	YNL311C	SVF1	Q05515	481 aa		3.42	□□□□□ -1.86
SKP2	YNL311C	FMP25	Q08023	583 aa		3.42	□□□□□ -1.86
SKP2	YNL311C	ISU2	Q12056	156 aa		3.42	□□□□□ -1.86
SKP2	YNL311C	LAA1	P39526	2014 aa		3.42	□□□□□ -1.86
SKP2	YNL311C	PDE1	P22434	369 aa		3.42	□□□□□ -1.86
SKP2	YNL311C	STE11	P23561	717 aa		3.42	□□□□□ -1.86
SKP2	YNL311C	RPT1	P33299	467 aa	Known RBP	3.42	□□□□□ -1.86
SKP2	YNL311C	YBL036C	P38197	257 aa		3.42	□□□□□ -1.86
SKP2	YNL311C	CCM1	P48237	864 aa	Predicted RBP	3.42	□□□□□ -1.86
SKP2	YNL311C	NUP84	P52891	726 aa		3.42	□□□□□ -1.86
SKP2	YNL311C	CNM67	P53865	581 aa	Known RBP	3.42	□□□□□ -1.86
SKP2	YNL311C	UFD2	P54860	961 aa		3.42	□□□□□ -1.86
SKP2	YNL311C	SLG1	P54867	378 aa		3.42	□□□□□ -1.86
SKP2	YNL311C	CIT1	P00890	479 aa		3.41	□□□□□ -1.86
SKP2	YNL311C	HXK1	P04806	485 aa	Known RBP	3.41	□□□□□ -1.86
SKP2	YNL311C	RIP1	P08067	215 aa		3.41	□□□□□ -1.86
SKP2	YNL311C	GLN3	P18494	730 aa		3.41	□□□□□ -1.86
SKP2	YNL311C	KIC1	P38692	1080 aa		3.41	□□□□□ -1.86
SKP2	YNL311C	DUG1	P43616	481 aa	Known RBP	3.41	□□□□□ -1.86
SKP2	YNL311C	ACF4	P47129	309 aa		3.41	□□□□□ -1.86
SKP2	YNL311C	NMA2	P53204	395 aa		3.41	□□□□□ -1.86
SKP2	YNL311C	YMR206W	Q03695	313 aa		3.41	□□□□□ -1.86
SKP2	YNL311C	ACC1	Q00955	2233 aa	Known RBP	3.41	□□□□□ -1.86
SKP2	YNL311C	CHO2	P05374	869 aa	Known RBP	3.41	□□□□□ -1.86
SKP2	YNL311C	KTR3	P38130	404 aa	Predicted RBP	3.41	□□□□□ -1.86
SKP2	YNL311C	ISW1	P38144	1129 aa		3.41	□□□□□ -1.86
SKP2	YNL311C	PKH3	Q03306	898 aa	Predicted RBP	3.41	□□□□□ -1.86
SKP2	YNL311C	OYE2	Q03558	400 aa	Known RBP	3.41	□□□□□ -1.86
SKP2	YNL311C	RTK1	Q12100	620 aa	Predicted RBP	3.41	□□□□□ -1.86
SKP2	YNL311C	RPL43A	P0CX25	92 aa	Known RBP	3.4	□□□□□ -1.86
SKP2	YNL311C	RPL43B	P0CX26	92 aa		3.4	□□□□□ -1.86
SKP2	YNL311C	FPR1	P20081	114 aa	Known RBP	3.4	□□□□□ -1.86
SKP2	YNL311C	SRP54	P20424	541 aa	Known RBP	3.4	□□□□□ -1.86
SKP2	YNL311C	SIR1	P21691	654 aa		3.4	□□□□□ -1.86
SKP2	YNL311C	KIP1	P28742	1111 aa		3.4	□□□□□ -1.86
SKP2	YNL311C	ISF1	P32488	338 aa		3.4	□□□□□ -1.86
SKP2	YNL311C	ANP1	P32629	500 aa		3.4	□□□□□ -1.86
SKP2	YNL311C	MET1	P36150	593 aa		3.4	□□□□□ -1.86
SKP2	YNL311C	CRP1	P38845	465 aa	Known RBP	3.4	□□□□□ -1.86
SKP2	YNL311C	ALG2	P43636	503 aa		3.4	□□□□□ -1.86
SKP2	YNL311C	RCR2	Q03446	210 aa	Known RBP	3.4	□□□□□ -1.86
SKP2	YNL311C	CRD1	Q07560	283 aa		3.4	□□□□□ -1.86
SKP2	YNL311C	SMC5	Q08204	1093 aa		3.4	□□□□□ -1.86
SKP2	YNL311C	RVB2	Q12464	471 aa	Known RBP	3.4	□□□□□ -1.86
SKP2	YNL311C	MTF1	P14908	341 aa	Known RBP	3.4	□□□□□ -1.87
SKP2	YNL311C	OPI1	P21957	404 aa		3.4	□□□□□ -1.87
SKP2	YNL311C	GAC1	P28006	793 aa		3.4	□□□□□ -1.87
SKP2	YNL311C	TMT1	P32643	299 aa		3.4	□□□□□ -1.87
SKP2	YNL311C	HEL1	P36113	551 aa		3.4	□□□□□ -1.87
SKP2	YNL311C	AAP1	P37898	856 aa	Known RBP	3.4	□□□□□ -1.87
SKP2	YNL311C	UBP14	P38237	781 aa	Known RBP	3.4	□□□□□ -1.87
SKP2	YNL311C	PCM1	P38628	557 aa	Known RBP	3.4	□□□□□ -1.87
SKP2	YNL311C	EAF5	P39995	279 aa		3.4	□□□□□ -1.87
SKP2	YNL311C	IES1	P43579	692 aa		3.4	□□□□□ -1.87
SKP2	YNL311C	MYO5	Q04439	1219 aa	Known RBP	3.4	□□□□□ -1.87
SKP2	YNL311C	YDL144C	Q07589	356 aa		3.4	□□□□□ -1.87
SKP2	YNL311C	DSE3	Q08729	430 aa		3.4	□□□□□ -1.87
SKP2	YNL311C	ARP6	Q12509	438 aa		3.4	□□□□□ -1.87
SKP2	YNL311C	CYS3	P31373	394 aa	Known RBP	3.39	□□□□□ -1.87
SKP2	YNL311C	DPH2	P32461	534 aa		3.39	□□□□□ -1.87
SKP2	YNL311C	YBR284W	P38150	797 aa		3.39	□□□□□ -1.87
SKP2	YNL311C	PCA1	P38360	1216 aa		3.39	□□□□□ -1.87
SKP2	YNL311C	DOT6	P40059	670 aa	Known RBP	3.39	□□□□□ -1.87
SKP2	YNL311C	YGL036W	P53185	909 aa	Predicted RBP	3.39	□□□□□ -1.87
SKP2	YNL311C	PRP8	P33334	2413 aa	Known RBP	3.39	□□□□□ -1.87
SKP2	YNL311C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	3.39	□□□□□ -1.87	RIP-Chip
SKP2	YNL311C	PFK1	P16861	987 aa	Known RBP	3.39	□□□□□ -1.87
SKP2	YNL311C	SRX1	P36077	127 aa		3.39	□□□□□ -1.87
SKP2	YNL311C	TIF5	P38431	405 aa	Known RBP	3.39	□□□□□ -1.87
SKP2	YNL311C	BAT1	P38891	393 aa	Known RBP	3.39	□□□□□ -1.87
SKP2	YNL311C	COQ9	Q05779	260 aa		3.39	□□□□□ -1.87
SKP2	YNL311C	GYP1	Q08484	637 aa		3.39	□□□□□ -1.87
SKP2	YNL311C	SSF2	Q12153	453 aa	Predicted RBP	3.39	□□□□□ -1.87
SKP2	YNL311C	HRP1	Q99383	534 aa	Known RBP	3.39	□□□□□ -1.87
SKP2	YNL311C	IRA1	P18963	3092 aa		3.38	□□□□□ -1.87
SKP2	YNL311C	TEC1	P18412	486 aa		3.38	□□□□□ -1.87
SKP2	YNL311C	IMP2'	P32351	346 aa		3.38	□□□□□ -1.87
SKP2	YNL311C	SAP190	P36123	1033 aa		3.38	□□□□□ -1.87
SKP2	YNL311C	SUL1	P38359	859 aa		3.38	□□□□□ -1.87
SKP2	YNL311C	PIK1	P39104	1066 aa		3.38	□□□□□ -1.87
SKP2	YNL311C	ASG1	P40467	964 aa		3.38	□□□□□ -1.87
SKP2	YNL311C	VPS25	P47142	202 aa		3.38	□□□□□ -1.87
SKP2	YNL311C	ALO1	P54783	526 aa	Known RBP	3.38	□□□□□ -1.87
SKP2	YNL311C	APM4	Q99186	491 aa		3.38	□□□□□ -1.87
SKP2	YNL311C	PDR18	P53756	1333 aa		3.38	□□□□□ -1.87
SKP2	YNL311C	NOT3	P06102	836 aa	Known RBP	3.37	□□□□□ -1.87
SKP2	YNL311C	MAK31	P23059	88 aa		3.37	□□□□□ -1.87
SKP2	YNL311C	NAR1	P23503	491 aa	Known RBP	3.37	□□□□□ -1.87
SKP2	YNL311C	SRO9	P25567	434 aa	Known RBP	3.37	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms