RNA–Protein interactions for RNA: YNL308C

KRI1, Transcript of Essential nucleolar protein required for 40S ribosome biogenesis, yeast

Gene KRI1, Length 1,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KRI1	YNL308C	UTP5	Q04177	643 aa	Known RBP	4.01	□□□□□ -1.77
KRI1	YNL308C	SFH1	Q06168	426 aa		4.01	□□□□□ -1.77
KRI1	YNL308C	RRP9	Q06506	573 aa	Known RBP	4.01	□□□□□ -1.77
KRI1	YNL308C	SDH5	Q08230	162 aa		4.01	□□□□□ -1.77
KRI1	YNL308C	THI72	Q08579	599 aa		4.01	□□□□□ -1.77
KRI1	YNL308C	REC8	Q12188	680 aa		4.01	□□□□□ -1.77
KRI1	YNL308C	CLF1	Q12309	687 aa	Predicted RBP	4.01	□□□□□ -1.77
KRI1	YNL308C	SNT2	P53127	1403 aa		4	□□□□□ -1.77
KRI1	YNL308C	DED1	P06634	604 aa	Known RBP	4	□□□□□ -1.77
KRI1	YNL308C	KRS1	P15180	591 aa	Known RBP	4	□□□□□ -1.77
KRI1	YNL308C	SPE2	P21182	396 aa		4	□□□□□ -1.77
KRI1	YNL308C	REI1	P38344	393 aa	Predicted RBP	4	□□□□□ -1.77
KRI1	YNL308C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4	□□□□□ -1.77	not detected
KRI1	YNL308C	TPO2	P53283	614 aa		4	□□□□□ -1.77
KRI1	YNL308C	EST2	Q06163	884 aa		4	□□□□□ -1.77
KRI1	YNL308C	TMA46	Q12000	345 aa	Known RBP	4	□□□□□ -1.77
KRI1	YNL308C	MBR1	P23493	339 aa		3.99	□□□□□ -1.77
KRI1	YNL308C	GRX1	P25373	110 aa	Known RBP	3.99	□□□□□ -1.77
KRI1	YNL308C	ATG14	P38270	344 aa		3.99	□□□□□ -1.77
KRI1	YNL308C	HXT13	P39924	564 aa		3.99	□□□□□ -1.77
KRI1	YNL308C	NUP82	P40368	713 aa		3.99	□□□□□ -1.77
KRI1	YNL308C	RSM25	P40496	264 aa		3.99	□□□□□ -1.77
KRI1	YNL308C	VID28	P40547	921 aa		3.99	□□□□□ -1.77
KRI1	YNL308C	HYR1	P40581	163 aa	Known RBP	3.99	□□□□□ -1.77
KRI1	YNL308C	TAF1	P46677	1066 aa		3.99	□□□□□ -1.77
KRI1	YNL308C	CTH1	P47976	325 aa		3.99	□□□□□ -1.77
KRI1	YNL308C	CCM1	P48237	864 aa	Predicted RBP	3.99	□□□□□ -1.77
KRI1	YNL308C	SHE4	P51534	789 aa		3.99	□□□□□ -1.77
KRI1	YNL308C	RRP46	P53256	223 aa	Predicted RBP	3.99	□□□□□ -1.77
KRI1	YNL308C	YNL247W	P53852	767 aa	Known RBP	3.99	□□□□□ -1.77
KRI1	YNL308C	SIW14	P53965	281 aa		3.99	□□□□□ -1.77
KRI1	YNL308C	YOL057W	Q08225	711 aa		3.99	□□□□□ -1.77
KRI1	YNL308C	ALG6	Q12001	544 aa	Known RBP	3.99	□□□□□ -1.77
KRI1	YNL308C	RRP5	Q05022	1729 aa	Known RBP	3.99	□□□□□ -1.77
KRI1	YNL308C	SPO14	P36126	1683 aa		3.99	□□□□□ -1.77
KRI1	YNL308C	HSC82	P15108	705 aa	Known RBP	3.99	□□□□□ -1.77
KRI1	YNL308C	PRP16	P15938	1071 aa	Predicted RBP	3.99	□□□□□ -1.77
KRI1	YNL308C	ECM32	P32644	1121 aa	Known RBP	3.99	□□□□□ -1.77
KRI1	YNL308C	BUD2	P33314	1104 aa		3.99	□□□□□ -1.77
KRI1	YNL308C	TIF3	P34167	436 aa	Known RBP	3.99	□□□□□ -1.77
KRI1	YNL308C	YEL1	P34225	687 aa		3.99	□□□□□ -1.77
KRI1	YNL308C	RRP1	P35178	278 aa	Predicted RBP	3.99	□□□□□ -1.77
KRI1	YNL308C	ADD66	P36040	267 aa		3.99	□□□□□ -1.77
KRI1	YNL308C	YFL066C	P43538	392 aa		3.99	□□□□□ -1.77
KRI1	YNL308C	YGR053C	P53234	283 aa		3.99	□□□□□ -1.77
KRI1	YNL308C	HXT17	P53631	564 aa		3.99	□□□□□ -1.77
KRI1	YNL308C	HXT15	P54854	567 aa		3.99	□□□□□ -1.77
KRI1	YNL308C	ROD1	Q02805	837 aa		3.99	□□□□□ -1.77
KRI1	YNL308C	FMP30	Q02883	468 aa		3.99	□□□□□ -1.77
KRI1	YNL308C	GAS5	Q08193	484 aa		3.99	□□□□□ -1.77
KRI1	YNL308C	MET7	Q08645	548 aa		3.99	□□□□□ -1.77
KRI1	YNL308C	LYS2	P07702	1392 aa		3.98	□□□□□ -1.77
KRI1	YNL308C	RAV1	P47104	1357 aa		3.98	□□□□□ -1.77
KRI1	YNL308C	CDC37	P06101	506 aa	Known RBP	3.98	□□□□□ -1.77
KRI1	YNL308C	PTH2	P34222	208 aa		3.98	□□□□□ -1.77
KRI1	YNL308C	ECM4	P36156	370 aa		3.98	□□□□□ -1.77
KRI1	YNL308C	GRX7	P38068	203 aa		3.98	□□□□□ -1.77
KRI1	YNL308C	EFM2	P38347	419 aa		3.98	□□□□□ -1.77
KRI1	YNL308C	NPR3	P38742	1146 aa		3.98	□□□□□ -1.77
KRI1	YNL308C	UBP12	P39538	1254 aa		3.98	□□□□□ -1.77
KRI1	YNL308C	SPO74	P45819	413 aa		3.98	□□□□□ -1.77
KRI1	YNL308C	YNR063W	P53749	607 aa		3.98	□□□□□ -1.77
KRI1	YNL308C	NSG2	P53898	299 aa		3.98	□□□□□ -1.77
KRI1	YNL308C	BET4	Q00618	327 aa		3.98	□□□□□ -1.77
KRI1	YNL308C	EEB1	Q02891	456 aa		3.98	□□□□□ -1.77
KRI1	YNL308C	TDA6	Q06466	467 aa		3.98	□□□□□ -1.77
KRI1	YNL308C	YOR223W	Q12015	292 aa		3.98	□□□□□ -1.77
KRI1	YNL308C	SLX4	Q12098	748 aa		3.98	□□□□□ -1.77
KRI1	YNL308C	YLR125W	Q12138	136 aa		3.98	□□□□□ -1.77
KRI1	YNL308C	ATG9	Q12142	997 aa		3.98	□□□□□ -1.77
KRI1	YNL308C	UTP10	P42945	1769 aa	Known RBP	3.98	□□□□□ -1.77
KRI1	YNL308C	IML1	P47170	1584 aa		3.98	□□□□□ -1.77
KRI1	YNL308C	DRS2	P39524	1355 aa		3.98	□□□□□ -1.77
KRI1	YNL308C	YOR093C	Q12275	1648 aa		3.97	□□□□□ -1.77
KRI1	YNL308C	USO1	P25386	1790 aa		3.97	□□□□□ -1.77
KRI1	YNL308C	PHO8	P11491	566 aa		3.97	□□□□□ -1.77
KRI1	YNL308C	BIK1	P11709	440 aa		3.97	□□□□□ -1.77
KRI1	YNL308C	PMR1	P13586	950 aa		3.97	□□□□□ -1.77
KRI1	YNL308C	FRS2	P15625	503 aa	Known RBP	3.97	□□□□□ -1.77
KRI1	YNL308C	PRI2	P20457	528 aa		3.97	□□□□□ -1.77
KRI1	YNL308C	CDC48	P25694	835 aa	Known RBP	3.97	□□□□□ -1.77
KRI1	YNL308C	MDJ1	P35191	511 aa		3.97	□□□□□ -1.77
KRI1	YNL308C	RER2	P35196	286 aa		3.97	□□□□□ -1.77
KRI1	YNL308C	SRL3	P36167	246 aa		3.97	□□□□□ -1.77
KRI1	YNL308C	PMC1	P38929	1173 aa	Predicted RBP	3.97	□□□□□ -1.77
KRI1	YNL308C	SHC1	P39000	512 aa		3.97	□□□□□ -1.77
KRI1	YNL308C	ENT3	P47160	408 aa		3.97	□□□□□ -1.77
KRI1	YNL308C	BUD9	P53226	547 aa		3.97	□□□□□ -1.77
KRI1	YNL308C	RCM1	P53972	490 aa		3.97	□□□□□ -1.77
KRI1	YNL308C	NAN1	Q02931	896 aa	Known RBP	3.97	□□□□□ -1.77
KRI1	YNL308C	CEF1	Q03654	590 aa	Predicted RBP	3.97	□□□□□ -1.77
KRI1	YNL308C	YDR341C	Q05506	607 aa	Known RBP	3.97	□□□□□ -1.77
KRI1	YNL308C	AVO1	Q08236	1176 aa		3.97	□□□□□ -1.77
KRI1	YNL308C	TY1A-NL1	Q12391	440 aa	Known RBP	3.97	□□□□□ -1.77
KRI1	YNL308C	PDR11	P40550	1411 aa		3.97	□□□□□ -1.77
KRI1	YNL308C	SAC3	P46674	1301 aa		3.97	□□□□□ -1.77
KRI1	YNL308C	ARD1	P07347	238 aa	Predicted RBP	3.97	□□□□□ -1.77
KRI1	YNL308C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
KRI1	YNL308C	FAR1	P21268	830 aa		3.97	□□□□□ -1.77
KRI1	YNL308C	STE11	P23561	717 aa		3.97	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms