RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W CEP3P40969 608 aa6.09□□□□□ -1.43
SSU72YNL222W ENV7Q12003 364 aa6.09□□□□□ -1.43
SSU72YNL222W TOM70P07213 617 aaKnown RBP6.08□□□□□ -1.44
SSU72YNL222W SED4P25365 1065 aa6.08□□□□□ -1.44
SSU72YNL222W URA1P28272 314 aaPredicted RBP6.08□□□□□ -1.44
SSU72YNL222W RSP5P39940 809 aaKnown RBP6.08□□□□□ -1.44
SSU72YNL222W YIL108WP40483 696 aaKnown RBP6.08□□□□□ -1.44
SSU72YNL222W UBP6P43593 499 aaKnown RBP6.08□□□□□ -1.44
SSU72YNL222W RTA1P53047 317 aa6.08□□□□□ -1.44
SSU72YNL222W KAR4P25583 335 aa6.07□□□□□ -1.44
SSU72YNL222W STE14P32584 239 aa6.07□□□□□ -1.44
SSU72YNL222W TYE7P33122 291 aaPredicted RBP6.07□□□□□ -1.44
SSU72YNL222W HDA1P53973 706 aa6.07□□□□□ -1.44
SSU72YNL222W YKR011CQ02209 353 aa6.07□□□□□ -1.44
SSU72YNL222W YOL098CQ12496 1037 aa6.07□□□□□ -1.44
SSU72YNL222W RPS9AO13516 197 aaKnown RBP6.06□□□□□ -1.44
SSU72YNL222W CAN1P04817 590 aa6.06□□□□□ -1.44
SSU72YNL222W MPH2P0CD99 609 aa6.06□□□□□ -1.44
SSU72YNL222W PFK1P16861 987 aaKnown RBP6.06□□□□□ -1.44
SSU72YNL222W CAD1P24813 409 aaKnown RBP6.06□□□□□ -1.44
SSU72YNL222W SCT1P32784 759 aa6.06□□□□□ -1.44
SSU72YNL222W LAS17Q12446 633 aa6.06□□□□□ -1.44
SSU72YNL222W STI1P15705 589 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
SSU72YNL222W GAL11P19659 1081 aa6.05□□□□□ -1.44
SSU72YNL222W FBP1P09201 348 aa6.04□□□□□ -1.44
SSU72YNL222W PMI40P29952 429 aaKnown RBP6.04□□□□□ -1.44
SSU72YNL222W GYP8P43570 497 aa6.04□□□□□ -1.44
SSU72YNL222W NIT3P49954 291 aa6.04□□□□□ -1.44
SSU72YNL222W SUN4P53616 420 aa6.04□□□□□ -1.44
SSU72YNL222W DEF1P35732 738 aaKnown RBP6.03□□□□□ -1.44
SSU72YNL222W GGA2P38817 585 aaKnown RBP6.03□□□□□ -1.44
SSU72YNL222W MSS4P38994 779 aa6.03□□□□□ -1.44
SSU72YNL222W SDP1P40479 209 aa6.03□□□□□ -1.44
SSU72YNL222W AIM21P40563 679 aa6.03□□□□□ -1.44
SSU72YNL222W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
SSU72YNL222W MSE1P48525 536 aa6.03□□□□□ -1.44
SSU72YNL222W SLU7Q02775 382 aaKnown RBP6.03□□□□□ -1.44
SSU72YNL222W ENB1Q08299 606 aa6.03□□□□□ -1.44
SSU72YNL222W PUS9Q12069 462 aa6.03□□□□□ -1.44
SSU72YNL222W HRR25P29295 494 aaKnown RBP6.02□□□□□ -1.45
SSU72YNL222W SEC21P32074 935 aaKnown RBP6.02□□□□□ -1.45
SSU72YNL222W SRP40P32583 406 aaPredicted RBP6.02□□□□□ -1.45
SSU72YNL222W OCA5P38738 679 aa6.02□□□□□ -1.45
SSU72YNL222W PUS2P53167 370 aa6.02□□□□□ -1.45
SSU72YNL222W KIN4Q01919 800 aa6.02□□□□□ -1.45
SSU72YNL222W YOR131CQ12486 218 aa6.02□□□□□ -1.45
SSU72YNL222W DAL7P21826 554 aa6.01□□□□□ -1.45
SSU72YNL222W EMC3P36039 253 aa6.01□□□□□ -1.45
SSU72YNL222W CTF8P38877 133 aa6.01□□□□□ -1.45
SSU72YNL222W ALG2P43636 503 aa6.01□□□□□ -1.45
SSU72YNL222W YGR283CP53336 341 aaPredicted RBP6.01□□□□□ -1.45
SSU72YNL222W GUP2Q08929 609 aa6.01□□□□□ -1.45
SSU72YNL222W PNS1Q12412 539 aa6.01□□□□□ -1.45
SSU72YNL222W CYS3P31373 394 aaKnown RBP6□□□□□ -1.45
SSU72YNL222W YKL091CP33324 310 aaKnown RBP6□□□□□ -1.45
SSU72YNL222W TAD1P53065 400 aa6□□□□□ -1.45
SSU72YNL222W NOG2P53742 486 aaKnown RBP6□□□□□ -1.45
SSU72YNL222W AIM39Q08223 395 aa6□□□□□ -1.45
SSU72YNL222W PPM2Q08282 695 aa6□□□□□ -1.45
SSU72YNL222W HAL9Q12180 1030 aa6□□□□□ -1.45
SSU72YNL222W PHR1P05066 565 aaKnown RBP RIP-Chip data5.99□□□□□ -1.45not detected
SSU72YNL222W ERR1P0CX10 437 aa5.99□□□□□ -1.45
SSU72YNL222W ERR2P0CX11 437 aa5.99□□□□□ -1.45
SSU72YNL222W BUL1P48524 976 aa5.99□□□□□ -1.45
SSU72YNL222W LRS4Q04087 347 aaKnown RBP5.99□□□□□ -1.45
SSU72YNL222W YOR022CQ12204 715 aa5.99□□□□□ -1.45
SSU72YNL222W YCL002CP25565 263 aa5.98□□□□□ -1.45
SSU72YNL222W PBP2P38151 413 aaKnown RBP RIP-Chip data5.98□□□□□ -1.45not detected
SSU72YNL222W YHR078WP38799 552 aa5.98□□□□□ -1.45
SSU72YNL222W DUS1P53759 423 aaKnown RBP5.98□□□□□ -1.45
SSU72YNL222W PEX19Q07418 342 aa5.98□□□□□ -1.45
SSU72YNL222W TUB3P09734 445 aaKnown RBP5.97□□□□□ -1.45
SSU72YNL222W TIM23P32897 222 aa5.97□□□□□ -1.45
SSU72YNL222W DAM1P53267 343 aa5.97□□□□□ -1.45
SSU72YNL222W PRC1P00729 532 aa5.96□□□□□ -1.46
SSU72YNL222W SLI1P53304 468 aa5.96□□□□□ -1.46
SSU72YNL222W RPN4Q03465 531 aa5.96□□□□□ -1.46
SSU72YNL222W URN1Q06525 465 aaKnown RBP5.96□□□□□ -1.46
SSU72YNL222W MET7Q08645 548 aa5.96□□□□□ -1.46
SSU72YNL222W SWM1Q12379 170 aa5.96□□□□□ -1.46
SSU72YNL222W EFT1P32324 842 aaKnown RBP5.95□□□□□ -1.46
SSU72YNL222W SPC29P33419 253 aa5.95□□□□□ -1.46
SSU72YNL222W SAP190P36123 1033 aa5.95□□□□□ -1.46
SSU72YNL222W CHS7P38843 316 aa5.95□□□□□ -1.46
SSU72YNL222W CHZ1P40019 153 aaPredicted RBP5.95□□□□□ -1.46
SSU72YNL222W PRP4P20053 465 aaKnown RBP5.94□□□□□ -1.46
SSU72YNL222W YDR514CQ04408 483 aa5.94□□□□□ -1.46
SSU72YNL222W REH1Q06709 432 aa5.94□□□□□ -1.46
SSU72YNL222W YLR040CQ07988 224 aa5.94□□□□□ -1.46
SSU72YNL222W TRP4P07285 380 aaPredicted RBP5.93□□□□□ -1.46
SSU72YNL222W RAD53P22216 821 aa5.93□□□□□ -1.46
SSU72YNL222W PER1P25625 357 aa5.93□□□□□ -1.46
SSU72YNL222W GDH3P39708 457 aa5.93□□□□□ -1.46
SSU72YNL222W VHR1P40522 640 aa5.93□□□□□ -1.46
SSU72YNL222W HSV2P50079 448 aaPredicted RBP5.93□□□□□ -1.46
SSU72YNL222W ERG5P54781 538 aa5.93□□□□□ -1.46
SSU72YNL222W ATP25Q03153 612 aa5.93□□□□□ -1.46
SSU72YNL222W TRM13Q12383 476 aa5.93□□□□□ -1.46
SSU72YNL222W BUD6P41697 788 aa5.92□□□□□ -1.46
SSU72YNL222W TY4A-JP47023 414 aa5.92□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 61.1 ms