RNA–Protein interactions for RNA: YNL032W

SIW14, Transcript of Tyrosine phosphatase involved in actin organization and endocytosis, yeast

Gene SIW14, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIW14	YNL032W	ABZ1	P37254	787 aa	Predicted RBP	4.61	□□□□□ -1.67
SIW14	YNL032W	KTR3	P38130	404 aa	Predicted RBP	4.61	□□□□□ -1.67
SIW14	YNL032W	MAL33	P38157	468 aa		4.61	□□□□□ -1.67
SIW14	YNL032W	CRG1	P38892	291 aa	RIP-Chip data	4.61	□□□□□ -1.67	not detected
SIW14	YNL032W	BUD6	P41697	788 aa		4.61	□□□□□ -1.67
SIW14	YNL032W	MON1	P53129	644 aa		4.61	□□□□□ -1.67
SIW14	YNL032W	YGR045C	P53229	120 aa		4.61	□□□□□ -1.67
SIW14	YNL032W	TAD3	Q9URQ3	322 aa		4.61	□□□□□ -1.67
SIW14	YNL032W	FRS2	P15625	503 aa	Known RBP	4.6	□□□□□ -1.67
SIW14	YNL032W	RDS1	P25611	832 aa		4.6	□□□□□ -1.67
SIW14	YNL032W	MCM5	P29496	775 aa	Known RBP	4.6	□□□□□ -1.67
SIW14	YNL032W	SMY2	P32909	740 aa	Known RBP	4.6	□□□□□ -1.67
SIW14	YNL032W	RPT1	P33299	467 aa	Known RBP	4.6	□□□□□ -1.67
SIW14	YNL032W	MGE1	P38523	228 aa		4.6	□□□□□ -1.67
SIW14	YNL032W	NUG1	P40010	520 aa	Known RBP	4.6	□□□□□ -1.67
SIW14	YNL032W	YGL081W	P53156	320 aa		4.6	□□□□□ -1.67
SIW14	YNL032W	TAH18	Q12181	623 aa		4.6	□□□□□ -1.67
SIW14	YNL032W	ENT1	Q12518	454 aa		4.6	□□□□□ -1.67
SIW14	YNL032W	YRF1-3	P0CX14	1859 aa		4.59	□□□□□ -1.67
SIW14	YNL032W	YRF1-7	P0CX15	1859 aa		4.59	□□□□□ -1.67
SIW14	YNL032W	SEC18	P18759	758 aa	Known RBP	4.59	□□□□□ -1.67
SIW14	YNL032W	MBR1	P23493	339 aa		4.59	□□□□□ -1.67
SIW14	YNL032W	MRC1	P25588	1096 aa		4.59	□□□□□ -1.67
SIW14	YNL032W	PRP40	P33203	583 aa	Known RBP	4.59	□□□□□ -1.67
SIW14	YNL032W	LTV1	P34078	463 aa		4.59	□□□□□ -1.67
SIW14	YNL032W	RFC5	P38251	354 aa		4.59	□□□□□ -1.67
SIW14	YNL032W	POM152	P39685	1337 aa		4.59	□□□□□ -1.67
SIW14	YNL032W	IOC3	P43596	787 aa		4.59	□□□□□ -1.67
SIW14	YNL032W	YRF1-6	P53819	1859 aa		4.59	□□□□□ -1.67
SIW14	YNL032W	YAF9	P53930	226 aa		4.59	□□□□□ -1.67
SIW14	YNL032W	VPS60	Q03390	229 aa		4.59	□□□□□ -1.67
SIW14	YNL032W	RMD1	Q03441	430 aa		4.59	□□□□□ -1.67
SIW14	YNL032W	DAL4	Q04895	635 aa		4.59	□□□□□ -1.67
SIW14	YNL032W	SGD1	Q06132	899 aa		4.59	□□□□□ -1.67
SIW14	YNL032W	SPN1	Q06505	410 aa	Predicted RBP	4.59	□□□□□ -1.67
SIW14	YNL032W	DIB1	Q06819	143 aa	Predicted RBP	4.59	□□□□□ -1.67
SIW14	YNL032W	CYB2	P00175	591 aa		4.58	□□□□□ -1.68
SIW14	YNL032W	RPS13	P05756	151 aa	Known RBP	4.58	□□□□□ -1.68
SIW14	YNL032W	MCM3	P24279	971 aa	Known RBP	4.58	□□□□□ -1.68
SIW14	YNL032W	RRP1	P35178	278 aa	Predicted RBP	4.58	□□□□□ -1.68
SIW14	YNL032W	APL2	P36000	726 aa	Predicted RBP	4.58	□□□□□ -1.68
SIW14	YNL032W	NNK1	P36003	928 aa		4.58	□□□□□ -1.68
SIW14	YNL032W	CIN4	P39110	191 aa		4.58	□□□□□ -1.68
SIW14	YNL032W	CUE3	P53137	624 aa	Known RBP	4.58	□□□□□ -1.68
SIW14	YNL032W	TIM50	Q02776	476 aa		4.58	□□□□□ -1.68
SIW14	YNL032W	ESF1	Q06344	628 aa	Known RBP	4.58	□□□□□ -1.68
SIW14	YNL032W	RRP15	Q06511	250 aa	Predicted RBP	4.58	□□□□□ -1.68
SIW14	YNL032W	IMH1	Q06704	911 aa	Known RBP	4.58	□□□□□ -1.68
SIW14	YNL032W	SFI1	Q12369	946 aa		4.58	□□□□□ -1.68
SIW14	YNL032W	LAM4	P38800	1345 aa		4.57	□□□□□ -1.68
SIW14	YNL032W	SES1	P07284	462 aa	Known RBP	4.57	□□□□□ -1.68
SIW14	YNL032W	GPA1	P08539	472 aa		4.57	□□□□□ -1.68
SIW14	YNL032W	STE11	P23561	717 aa		4.57	□□□□□ -1.68
SIW14	YNL032W	YEL043W	P32618	956 aa		4.57	□□□□□ -1.68
SIW14	YNL032W	BMH2	P34730	273 aa	Known RBP	4.57	□□□□□ -1.68
SIW14	YNL032W	SHM2	P37291	469 aa	Known RBP	4.57	□□□□□ -1.68
SIW14	YNL032W	YER130C	P39959	443 aa		4.57	□□□□□ -1.68
SIW14	YNL032W	VID28	P40547	921 aa		4.57	□□□□□ -1.68
SIW14	YNL032W	PIB2	P53191	635 aa		4.57	□□□□□ -1.68
SIW14	YNL032W	ALF1	P53904	254 aa		4.57	□□□□□ -1.68
SIW14	YNL032W	EST2	Q06163	884 aa		4.57	□□□□□ -1.68
SIW14	YNL032W	YCG1	Q06680	1035 aa		4.57	□□□□□ -1.68
SIW14	YNL032W	PSF3	Q12146	194 aa		4.57	□□□□□ -1.68
SIW14	YNL032W	NOP14	Q99207	810 aa	Known RBP	4.57	□□□□□ -1.68
SIW14	YNL032W	UTP10	P42945	1769 aa	Known RBP	4.56	□□□□□ -1.68
SIW14	YNL032W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
SIW14	YNL032W	GSY2	P27472	705 aa		4.56	□□□□□ -1.68
SIW14	YNL032W	BMH1	P29311	267 aa	Known RBP	4.56	□□□□□ -1.68
SIW14	YNL032W	SHU2	P38957	223 aa		4.56	□□□□□ -1.68
SIW14	YNL032W	ALG2	P43636	503 aa		4.56	□□□□□ -1.68
SIW14	YNL032W	IRC8	P47046	822 aa		4.56	□□□□□ -1.68
SIW14	YNL032W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
SIW14	YNL032W	YJR107W	P47145	328 aa		4.56	□□□□□ -1.68
SIW14	YNL032W	MAL13	P53338	473 aa		4.56	□□□□□ -1.68
SIW14	YNL032W	VPS75	P53853	264 aa		4.56	□□□□□ -1.68
SIW14	YNL032W	RAT1	Q02792	1006 aa	Known RBP	4.56	□□□□□ -1.68
SIW14	YNL032W	CLU1	Q03690	1277 aa	Known RBP	4.56	□□□□□ -1.68
SIW14	YNL032W	HCR1	Q05775	265 aa	Known RBP	4.56	□□□□□ -1.68
SIW14	YNL032W	RPN7	Q06103	429 aa	Known RBP	4.56	□□□□□ -1.68
SIW14	YNL032W	TOS4	Q06266	489 aa		4.56	□□□□□ -1.68
SIW14	YNL032W	AVO1	Q08236	1176 aa		4.56	□□□□□ -1.68
SIW14	YNL032W	PUS7	Q08647	676 aa	Known RBP	4.56	□□□□□ -1.68
SIW14	YNL032W	RRI2	Q12348	645 aa		4.56	□□□□□ -1.68
SIW14	YNL032W	CEX1	Q12453	761 aa		4.56	□□□□□ -1.68
SIW14	YNL032W	TUB2	P02557	457 aa	Known RBP	4.55	□□□□□ -1.68
SIW14	YNL032W	HXK1	P04806	485 aa	Known RBP	4.55	□□□□□ -1.68
SIW14	YNL032W	IMP2'	P32351	346 aa		4.55	□□□□□ -1.68
SIW14	YNL032W	YKL077W	P36081	392 aa		4.55	□□□□□ -1.68
SIW14	YNL032W	SAP190	P36123	1033 aa		4.55	□□□□□ -1.68
SIW14	YNL032W	YKR075C	P36155	307 aa		4.55	□□□□□ -1.68
SIW14	YNL032W	RTC4	P53850	401 aa		4.55	□□□□□ -1.68
SIW14	YNL032W	YNL193W	P53870	558 aa		4.55	□□□□□ -1.68
SIW14	YNL032W	ULP1	Q02724	621 aa		4.55	□□□□□ -1.68
SIW14	YNL032W	UBP16	Q02863	499 aa		4.55	□□□□□ -1.68
SIW14	YNL032W	GDE1	Q02979	1223 aa		4.55	□□□□□ -1.68
SIW14	YNL032W	GFD1	Q04839	188 aa	Known RBP	4.55	□□□□□ -1.68
SIW14	YNL032W	COG4	Q06096	861 aa		4.55	□□□□□ -1.68
SIW14	YNL032W	YLR358C	O13565	187 aa		4.54	□□□□□ -1.68
SIW14	YNL032W	PHO13	P19881	312 aa		4.54	□□□□□ -1.68
SIW14	YNL032W	UGA4	P32837	571 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 73.5 ms