RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C SIT1P39980 628 aa3.53□□□□□ -1.84
VTI1YMR197C SDP1P40479 209 aa3.53□□□□□ -1.84
VTI1YMR197C TPO2P53283 614 aa3.53□□□□□ -1.84
VTI1YMR197C IRC10Q08118 586 aa3.53□□□□□ -1.84
VTI1YMR197C RFA1P22336 621 aaKnown RBP3.52□□□□□ -1.85
VTI1YMR197C TYE7P33122 291 aaPredicted RBP3.52□□□□□ -1.85
VTI1YMR197C ATF1P40353 525 aa3.52□□□□□ -1.85
VTI1YMR197C CCM1P48237 864 aaPredicted RBP3.52□□□□□ -1.85
VTI1YMR197C SVF1Q05515 481 aa3.52□□□□□ -1.85
VTI1YMR197C TUB3P09734 445 aaKnown RBP3.51□□□□□ -1.85
VTI1YMR197C STE5P32917 917 aa3.51□□□□□ -1.85
VTI1YMR197C MTH1P35198 433 aa3.51□□□□□ -1.85
VTI1YMR197C CTF13P35203 478 aa3.51□□□□□ -1.85
VTI1YMR197C CTF8P38877 133 aa3.51□□□□□ -1.85
VTI1YMR197C VAC8P39968 578 aa3.51□□□□□ -1.85
VTI1YMR197C IRR1P40541 1150 aa3.51□□□□□ -1.85
VTI1YMR197C CEP3P40969 608 aa3.51□□□□□ -1.85
VTI1YMR197C YKR011CQ02209 353 aa3.51□□□□□ -1.85
VTI1YMR197C BUL2Q03758 920 aaKnown RBP3.51□□□□□ -1.85
VTI1YMR197C SWM1Q12379 170 aa3.51□□□□□ -1.85
VTI1YMR197C TRM11Q12463 433 aa3.51□□□□□ -1.85
VTI1YMR197C HBS1P32769 611 aaKnown RBP3.5□□□□□ -1.85
VTI1YMR197C TOK1P40310 691 aa3.5□□□□□ -1.85
VTI1YMR197C ELO3P40319 345 aa3.5□□□□□ -1.85
VTI1YMR197C GND2P53319 492 aa3.5□□□□□ -1.85
VTI1YMR197C LCD1Q04377 747 aa3.5□□□□□ -1.85
VTI1YMR197C FRE5Q08908 694 aa3.5□□□□□ -1.85
VTI1YMR197C MET3P08536 511 aa3.49□□□□□ -1.85
VTI1YMR197C PRP9P19736 530 aaKnown RBP3.49□□□□□ -1.85
VTI1YMR197C URA1P28272 314 aaPredicted RBP3.49□□□□□ -1.85
VTI1YMR197C SPC42P36094 363 aa3.49□□□□□ -1.85
VTI1YMR197C PPS1P38148 807 aa3.49□□□□□ -1.85
VTI1YMR197C SPF1P39986 1215 aaKnown RBP3.49□□□□□ -1.85
VTI1YMR197C HDA1P53973 706 aa3.49□□□□□ -1.85
VTI1YMR197C ALD6P54115 500 aaKnown RBP3.49□□□□□ -1.85
VTI1YMR197C LGE1Q02796 332 aaKnown RBP3.49□□□□□ -1.85
VTI1YMR197C DLT1Q04216 342 aa3.49□□□□□ -1.85
VTI1YMR197C TDA5Q06417 326 aaKnown RBP3.49□□□□□ -1.85
VTI1YMR197C HBT1Q07653 1046 aaKnown RBP3.49□□□□□ -1.85
VTI1YMR197C RPS9AO13516 197 aaKnown RBP3.48□□□□□ -1.85
VTI1YMR197C REC104P33323 182 aa3.48□□□□□ -1.85
VTI1YMR197C YBR184WP38299 523 aa3.48□□□□□ -1.85
VTI1YMR197C SDS3P40505 327 aa3.48□□□□□ -1.85
VTI1YMR197C FKH2P41813 862 aa3.48□□□□□ -1.85
VTI1YMR197C PFD1P46988 109 aa3.48□□□□□ -1.85
VTI1YMR197C CAF20P12962 161 aaKnown RBP3.47□□□□□ -1.85
VTI1YMR197C CUE2P36075 443 aaKnown RBP3.47□□□□□ -1.85
VTI1YMR197C YBR284WP38150 797 aa3.47□□□□□ -1.85
VTI1YMR197C RPP1P38786 293 aa3.47□□□□□ -1.85
VTI1YMR197C YHR078WP38799 552 aa3.47□□□□□ -1.85
VTI1YMR197C DAS1P47005 663 aa3.47□□□□□ -1.85
VTI1YMR197C PUS2P53167 370 aa3.47□□□□□ -1.85
VTI1YMR197C MRPS35P53292 345 aa3.47□□□□□ -1.85
VTI1YMR197C YPR071WQ12346 211 aa3.47□□□□□ -1.85
VTI1YMR197C PRP4P20053 465 aaKnown RBP3.46□□□□□ -1.86
VTI1YMR197C CDC11P32458 415 aa3.46□□□□□ -1.86
VTI1YMR197C YHL017WP38745 532 aa3.46□□□□□ -1.86
VTI1YMR197C ALR2P43553 858 aa3.46□□□□□ -1.86
VTI1YMR197C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
VTI1YMR197C MUP1P50276 574 aa3.46□□□□□ -1.86
VTI1YMR197C ADY4Q05955 493 aa3.46□□□□□ -1.86
VTI1YMR197C BDF2Q07442 638 aa3.46□□□□□ -1.86
VTI1YMR197C MPH2P0CD99 609 aa3.45□□□□□ -1.86
VTI1YMR197C VHR1P40522 640 aa3.45□□□□□ -1.86
VTI1YMR197C FMP25Q08023 583 aa3.45□□□□□ -1.86
VTI1YMR197C MRH1Q12117 320 aaPredicted RBP3.45□□□□□ -1.86
VTI1YMR197C MSD1P15179 658 aaKnown RBP3.44□□□□□ -1.86
VTI1YMR197C DUS1P53759 423 aaKnown RBP3.44□□□□□ -1.86
VTI1YMR197C ASI2P53895 289 aa3.44□□□□□ -1.86
VTI1YMR197C PKH1Q03407 766 aa3.44□□□□□ -1.86
VTI1YMR197C HAL9Q12180 1030 aa3.44□□□□□ -1.86
VTI1YMR197C PET10P36139 283 aa3.43□□□□□ -1.86
VTI1YMR197C YBR053CP38235 358 aa3.43□□□□□ -1.86
VTI1YMR197C YJL163CP46996 555 aa3.43□□□□□ -1.86
VTI1YMR197C CRR1Q05790 422 aa3.43□□□□□ -1.86
VTI1YMR197C UBX5Q06682 500 aa3.43□□□□□ -1.86
VTI1YMR197C ENV7Q12003 364 aa3.43□□□□□ -1.86
VTI1YMR197C CYS3P31373 394 aaKnown RBP3.42□□□□□ -1.86
VTI1YMR197C PEX2P32800 271 aa3.42□□□□□ -1.86
VTI1YMR197C UTP8P53276 713 aaKnown RBP3.42□□□□□ -1.86
VTI1YMR197C EAF1Q06337 982 aa3.42□□□□□ -1.86
VTI1YMR197C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
VTI1YMR197C YOR022CQ12204 715 aa3.42□□□□□ -1.86
VTI1YMR197C SUT2Q12286 268 aa3.42□□□□□ -1.86
VTI1YMR197C HBN1Q96VH4 193 aa3.42□□□□□ -1.86
VTI1YMR197C GRX1P25373 110 aaKnown RBP3.41□□□□□ -1.86
VTI1YMR197C SCT1P32784 759 aa3.41□□□□□ -1.86
VTI1YMR197C TDP1P38319 544 aa3.41□□□□□ -1.86
VTI1YMR197C PCL5P38794 229 aa3.41□□□□□ -1.86
VTI1YMR197C GGA2P38817 585 aaKnown RBP3.41□□□□□ -1.86
VTI1YMR197C SAK1P38990 1142 aa3.41□□□□□ -1.86
VTI1YMR197C NIT3P49954 291 aa3.41□□□□□ -1.86
VTI1YMR197C AMA1P50082 593 aa3.41□□□□□ -1.86
VTI1YMR197C ERP6P53198 216 aa3.41□□□□□ -1.86
VTI1YMR197C NOG2P53742 486 aaKnown RBP3.41□□□□□ -1.86
VTI1YMR197C SSF2Q12153 453 aaPredicted RBP3.41□□□□□ -1.86
VTI1YMR197C PRC1P00729 532 aa3.4□□□□□ -1.87
VTI1YMR197C DAL7P21826 554 aa3.4□□□□□ -1.87
VTI1YMR197C RPL8BP29453 256 aaKnown RBP3.4□□□□□ -1.87
VTI1YMR197C NGG1P32494 702 aa3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms