RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C PFD1P46988 109 aa4.83□□□□□ -1.64
SSO2YMR183C UTP8P53276 713 aaKnown RBP4.83□□□□□ -1.64
SSO2YMR183C BDF2Q07442 638 aa4.83□□□□□ -1.64
SSO2YMR183C NTO1Q12311 748 aa4.83□□□□□ -1.64
SSO2YMR183C PMA1P05030 918 aaKnown RBP4.82□□□□□ -1.64
SSO2YMR183C MET6P05694 767 aaKnown RBP4.82□□□□□ -1.64
SSO2YMR183C MNN1P39106 762 aa4.82□□□□□ -1.64
SSO2YMR183C BUD6P41697 788 aa4.82□□□□□ -1.64
SSO2YMR183C YJR142WP47173 342 aa4.82□□□□□ -1.64
SSO2YMR183C RAI1P53063 387 aaKnown RBP4.82□□□□□ -1.64
SSO2YMR183C YGL081WP53156 320 aa4.82□□□□□ -1.64
SSO2YMR183C SPO75Q07798 868 aa4.82□□□□□ -1.64
SSO2YMR183C GIN4Q12263 1142 aa4.82□□□□□ -1.64
SSO2YMR183C RPL8BP29453 256 aaKnown RBP4.81□□□□□ -1.64
SSO2YMR183C CDC11P32458 415 aa4.81□□□□□ -1.64
SSO2YMR183C ALR2P43553 858 aa4.81□□□□□ -1.64
SSO2YMR183C CCM1P48237 864 aaPredicted RBP4.81□□□□□ -1.64
SSO2YMR183C EXG2P52911 562 aa4.81□□□□□ -1.64
SSO2YMR183C NCS6P53088 359 aa4.81□□□□□ -1.64
SSO2YMR183C ERP6P53198 216 aa4.81□□□□□ -1.64
SSO2YMR183C BUL2Q03758 920 aaKnown RBP4.81□□□□□ -1.64
SSO2YMR183C LCD1Q04377 747 aa4.81□□□□□ -1.64
SSO2YMR183C KCS1Q12494 1050 aa4.81□□□□□ -1.64
SSO2YMR183C NOT3P06102 836 aaKnown RBP4.8□□□□□ -1.64
SSO2YMR183C PMI40P29952 429 aaKnown RBP4.8□□□□□ -1.64
SSO2YMR183C NOP2P40991 618 aaKnown RBP4.8□□□□□ -1.64
SSO2YMR183C PHO23P50947 330 aa4.8□□□□□ -1.64
SSO2YMR183C UTP14Q04500 899 aaKnown RBP4.8□□□□□ -1.64
SSO2YMR183C EAF1Q06337 982 aa4.8□□□□□ -1.64
SSO2YMR183C WHI4Q07655 649 aaKnown RBP4.8□□□□□ -1.64
SSO2YMR183C UPC2Q12151 913 aa4.8□□□□□ -1.64
SSO2YMR183C NPC2Q12408 173 aa4.8□□□□□ -1.64
SSO2YMR183C RAD4P14736 754 aa4.79□□□□□ -1.64
SSO2YMR183C STE13P33894 931 aa4.79□□□□□ -1.64
SSO2YMR183C PMC1P38929 1173 aaPredicted RBP4.79□□□□□ -1.64
SSO2YMR183C PUS9Q12069 462 aa4.79□□□□□ -1.64
SSO2YMR183C REC104P33323 182 aa4.78□□□□□ -1.64
SSO2YMR183C GRX7P38068 203 aa4.78□□□□□ -1.64
SSO2YMR183C TOK1P40310 691 aa4.78□□□□□ -1.64
SSO2YMR183C NUP82P40368 713 aa4.78□□□□□ -1.64
SSO2YMR183C MSE1P48525 536 aa4.78□□□□□ -1.64
SSO2YMR183C SLI1P53304 468 aa4.78□□□□□ -1.64
SSO2YMR183C VPS30Q02948 557 aa4.78□□□□□ -1.64
SSO2YMR183C ENB1Q08299 606 aa4.78□□□□□ -1.64
SSO2YMR183C GUP2Q08929 609 aa4.78□□□□□ -1.64
SSO2YMR183C OSH2Q12451 1283 aa4.78□□□□□ -1.64
SSO2YMR183C PFK1P16861 987 aaKnown RBP4.77□□□□□ -1.65
SSO2YMR183C ARE1P25628 610 aa4.77□□□□□ -1.65
SSO2YMR183C DEF1P35732 738 aaKnown RBP4.77□□□□□ -1.65
SSO2YMR183C ERT1P38140 529 aa4.77□□□□□ -1.65
SSO2YMR183C YEN1P40028 759 aa4.77□□□□□ -1.65
SSO2YMR183C ZDS1P50111 915 aaKnown RBP4.77□□□□□ -1.65
SSO2YMR183C HUL5P53119 910 aa4.77□□□□□ -1.65
SSO2YMR183C YPR071WQ12346 211 aa4.77□□□□□ -1.65
SSO2YMR183C SED4P25365 1065 aa4.76□□□□□ -1.65
SSO2YMR183C STE14P32584 239 aa4.76□□□□□ -1.65
SSO2YMR183C YBR284WP38150 797 aa4.76□□□□□ -1.65
SSO2YMR183C TIM54P47045 478 aa4.76□□□□□ -1.65
SSO2YMR183C MDG1P53885 366 aa4.76□□□□□ -1.65
SSO2YMR183C HBN1Q96VH4 193 aa4.76□□□□□ -1.65
SSO2YMR183C FBP1P09201 348 aa4.75□□□□□ -1.65
SSO2YMR183C PHO8P11491 566 aa4.75□□□□□ -1.65
SSO2YMR183C HSP60P19882 572 aaKnown RBP4.75□□□□□ -1.65
SSO2YMR183C RFA1P22336 621 aaKnown RBP4.75□□□□□ -1.65
SSO2YMR183C KAR4P25583 335 aa4.75□□□□□ -1.65
SSO2YMR183C TIM23P32897 222 aa4.75□□□□□ -1.65
SSO2YMR183C PET10P36139 283 aa4.75□□□□□ -1.65
SSO2YMR183C UBP12P39538 1254 aa4.75□□□□□ -1.65
SSO2YMR183C AIM21P40563 679 aa4.75□□□□□ -1.65
SSO2YMR183C SUN4P53616 420 aa4.75□□□□□ -1.65
SSO2YMR183C NPL3Q01560 414 aaKnown RBP RIP-Chip data4.75□□□□□ -1.65 RIP-Chip
SSO2YMR183C SSL1Q04673 461 aaPredicted RBP4.75□□□□□ -1.65
SSO2YMR183C CIT1P00890 479 aa4.74□□□□□ -1.65
SSO2YMR183C MSD1P15179 658 aaKnown RBP4.74□□□□□ -1.65
SSO2YMR183C SSD1P24276 1250 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65not detected
SSO2YMR183C MSS4P38994 779 aa4.74□□□□□ -1.65
SSO2YMR183C AIM39Q08223 395 aa4.74□□□□□ -1.65
SSO2YMR183C YLR125WQ12138 136 aa4.74□□□□□ -1.65
SSO2YMR183C LAS17Q12446 633 aa4.74□□□□□ -1.65
SSO2YMR183C RPD3P32561 433 aa4.73□□□□□ -1.65
SSO2YMR183C SEC6P32844 805 aa4.73□□□□□ -1.65
SSO2YMR183C TYE7P33122 291 aaPredicted RBP4.73□□□□□ -1.65
SSO2YMR183C CRP1P38845 465 aaKnown RBP4.73□□□□□ -1.65
SSO2YMR183C YIL108WP40483 696 aaKnown RBP4.73□□□□□ -1.65
SSO2YMR183C YGR125WP53273 1036 aa4.73□□□□□ -1.65
SSO2YMR183C YKR011CQ02209 353 aa4.73□□□□□ -1.65
SSO2YMR183C PPM2Q08282 695 aa4.73□□□□□ -1.65
SSO2YMR183C MPH2P0CD99 609 aa4.72□□□□□ -1.65
SSO2YMR183C KAR1P11927 433 aa4.72□□□□□ -1.65
SSO2YMR183C TOP3P13099 656 aa4.72□□□□□ -1.65
SSO2YMR183C URA1P28272 314 aaPredicted RBP4.72□□□□□ -1.65
SSO2YMR183C HRR25P29295 494 aaKnown RBP4.72□□□□□ -1.65
SSO2YMR183C THI4P32318 326 aa4.72□□□□□ -1.65
SSO2YMR183C YHR020WP38708 688 aaKnown RBP4.72□□□□□ -1.65
SSO2YMR183C SDP1P40479 209 aa4.72□□□□□ -1.65
SSO2YMR183C CEP3P40969 608 aa4.72□□□□□ -1.65
SSO2YMR183C HUL4P40985 892 aa4.72□□□□□ -1.65
SSO2YMR183C HDA1P53973 706 aa4.72□□□□□ -1.65
SSO2YMR183C KIN4Q01919 800 aa4.72□□□□□ -1.65
SSO2YMR183C TAF8Q03750 510 aa4.72□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms