RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C PAP1P29468 568 aaKnown RBP3.79□□□□□ -1.8
SHH3YMR118C NGR1P32831 672 aaKnown RBP3.79□□□□□ -1.8
SHH3YMR118C HEL1P36113 551 aa3.79□□□□□ -1.8
SHH3YMR118C HXT5P38695 592 aa3.79□□□□□ -1.8
SHH3YMR118C MRX1P40050 688 aa3.79□□□□□ -1.8
SHH3YMR118C VFA1P40080 203 aa3.79□□□□□ -1.8
SHH3YMR118C QDR2P40474 542 aa3.79□□□□□ -1.8
SHH3YMR118C MAD1P40957 749 aa3.79□□□□□ -1.8
SHH3YMR118C AIP1P46680 615 aaKnown RBP3.79□□□□□ -1.8
SHH3YMR118C IRC8P47046 822 aa3.79□□□□□ -1.8
SHH3YMR118C YGR237CP50089 785 aa3.79□□□□□ -1.8
SHH3YMR118C DOS2P54858 310 aa3.79□□□□□ -1.8
SHH3YMR118C GDE1Q02979 1223 aa3.79□□□□□ -1.8
SHH3YMR118C UME1Q03010 460 aa3.79□□□□□ -1.8
SHH3YMR118C POB3Q04636 552 aaKnown RBP3.79□□□□□ -1.8
SHH3YMR118C PSR2Q07949 397 aa3.79□□□□□ -1.8
SHH3YMR118C FKS3Q04952 1785 aa3.79□□□□□ -1.8
SHH3YMR118C ADR1P07248 1323 aa3.78□□□□□ -1.8
SHH3YMR118C POM152P39685 1337 aa3.78□□□□□ -1.8
SHH3YMR118C MRP10O75012 95 aa3.78□□□□□ -1.8
SHH3YMR118C GAL11P19659 1081 aa3.78□□□□□ -1.8
SHH3YMR118C SEC14P24280 304 aaKnown RBP3.78□□□□□ -1.8
SHH3YMR118C CDC10P25342 322 aaKnown RBP3.78□□□□□ -1.8
SHH3YMR118C PSO2P30620 661 aa3.78□□□□□ -1.8
SHH3YMR118C COQ2P32378 372 aa3.78□□□□□ -1.8
SHH3YMR118C HIR1P32479 840 aa3.78□□□□□ -1.8
SHH3YMR118C ZUO1P32527 433 aaKnown RBP3.78□□□□□ -1.8
SHH3YMR118C SFA1P32771 386 aa3.78□□□□□ -1.8
SHH3YMR118C RAD5P32849 1169 aaPredicted RBP3.78□□□□□ -1.8
SHH3YMR118C SEC8P32855 1065 aa3.78□□□□□ -1.8
SHH3YMR118C PGM1P33401 570 aaKnown RBP3.78□□□□□ -1.8
SHH3YMR118C YKR018CP36114 725 aa3.78□□□□□ -1.8
SHH3YMR118C ISW1P38144 1129 aa3.78□□□□□ -1.8
SHH3YMR118C OLA1P38219 394 aaKnown RBP3.78□□□□□ -1.8
SHH3YMR118C RXT2P38255 430 aa3.78□□□□□ -1.8
SHH3YMR118C TDA3P38758 523 aa3.78□□□□□ -1.8
SHH3YMR118C ILM1P47155 203 aa3.78□□□□□ -1.8
SHH3YMR118C HFM1P51979 1187 aa3.78□□□□□ -1.8
SHH3YMR118C RTC4P53850 401 aa3.78□□□□□ -1.8
SHH3YMR118C UFD2P54860 961 aa3.78□□□□□ -1.8
SHH3YMR118C VPS30Q02948 557 aa3.78□□□□□ -1.8
SHH3YMR118C VTI1Q04338 217 aa3.78□□□□□ -1.8
SHH3YMR118C TFC6Q06339 672 aa3.78□□□□□ -1.8
SHH3YMR118C SPP382Q06411 708 aaPredicted RBP3.78□□□□□ -1.8
SHH3YMR118C OPY2Q06810 360 aa3.78□□□□□ -1.8
SHH3YMR118C YLR001CQ07895 862 aa3.78□□□□□ -1.8
SHH3YMR118C PPM2Q08282 695 aa3.78□□□□□ -1.8
SHH3YMR118C APL5Q08951 932 aaKnown RBP3.78□□□□□ -1.8
SHH3YMR118C CEX1Q12453 761 aa3.78□□□□□ -1.8
SHH3YMR118C PTC5Q12511 572 aa3.78□□□□□ -1.8
SHH3YMR118C TY4A-HQ6Q5P6 413 aa3.78□□□□□ -1.8
SHH3YMR118C URB1P34241 1764 aaKnown RBP3.78□□□□□ -1.8
SHH3YMR118C KRS1P15180 591 aaKnown RBP3.77□□□□□ -1.81
SHH3YMR118C ALG1P16661 449 aa3.77□□□□□ -1.81
SHH3YMR118C COQ1P18900 473 aa3.77□□□□□ -1.81
SHH3YMR118C ARG1P22768 420 aa3.77□□□□□ -1.81
SHH3YMR118C HXT1P32465 570 aa3.77□□□□□ -1.81
SHH3YMR118C PDB1P32473 366 aaKnown RBP3.77□□□□□ -1.81
SHH3YMR118C SQT1P35184 431 aa3.77□□□□□ -1.81
SHH3YMR118C RPC25P35718 212 aa3.77□□□□□ -1.81
SHH3YMR118C YKL133CP36066 463 aa3.77□□□□□ -1.81
SHH3YMR118C KAE1P36132 386 aa3.77□□□□□ -1.81
SHH3YMR118C GRX7P38068 203 aa3.77□□□□□ -1.81
SHH3YMR118C MAL31P38156 614 aa3.77□□□□□ -1.81
SHH3YMR118C SPP381P38282 291 aaPredicted RBP3.77□□□□□ -1.81
SHH3YMR118C SIP3P38717 1229 aa3.77□□□□□ -1.81
SHH3YMR118C SMC2P38989 1170 aaKnown RBP3.77□□□□□ -1.81
SHH3YMR118C IES1P43579 692 aa3.77□□□□□ -1.81
SHH3YMR118C IOC3P43596 787 aa3.77□□□□□ -1.81
SHH3YMR118C VPS4P52917 437 aa3.77□□□□□ -1.81
SHH3YMR118C TAN1P53072 289 aaPredicted RBP3.77□□□□□ -1.81
SHH3YMR118C ZPR1P53303 486 aaKnown RBP3.77□□□□□ -1.81
SHH3YMR118C HOT1Q03213 719 aa3.77□□□□□ -1.81
SHH3YMR118C YMR114CQ04471 368 aaKnown RBP3.77□□□□□ -1.81
SHH3YMR118C SOV1Q04748 898 aa3.77□□□□□ -1.81
SHH3YMR118C MRD1Q06106 887 aaKnown RBP3.77□□□□□ -1.81
SHH3YMR118C YAP7Q08182 245 aa3.77□□□□□ -1.81
SHH3YMR118C YOR296WQ08748 1289 aa3.77□□□□□ -1.81
SHH3YMR118C CWC2Q12046 339 aaPredicted RBP3.77□□□□□ -1.81
SHH3YMR118C TIP41Q12199 356 aa3.77□□□□□ -1.81
SHH3YMR118C ARG4P04076 463 aaPredicted RBP3.76□□□□□ -1.81
SHH3YMR118C PPR1P07272 904 aaPredicted RBP3.76□□□□□ -1.81
SHH3YMR118C RPB2P08518 1224 aaKnown RBP3.76□□□□□ -1.81
SHH3YMR118C GFA1P14742 717 aaKnown RBP3.76□□□□□ -1.81
SHH3YMR118C IDI1P15496 288 aa3.76□□□□□ -1.81
SHH3YMR118C RNR3P21672 869 aaKnown RBP3.76□□□□□ -1.81
SHH3YMR118C MRPS28P21771 286 aa3.76□□□□□ -1.81
SHH3YMR118C GCG1P32656 232 aaKnown RBP3.76□□□□□ -1.81
SHH3YMR118C YME2P32843 850 aa3.76□□□□□ -1.81
SHH3YMR118C LOS1P33418 1100 aaPredicted RBP3.76□□□□□ -1.81
SHH3YMR118C LAS1P36146 502 aaPredicted RBP3.76□□□□□ -1.81
SHH3YMR118C GEF1P37020 779 aa3.76□□□□□ -1.81
SHH3YMR118C UGA2P38067 497 aa3.76□□□□□ -1.81
SHH3YMR118C PCI8P40512 444 aa3.76□□□□□ -1.81
SHH3YMR118C LYS14P40971 790 aa3.76□□□□□ -1.81
SHH3YMR118C DAK2P43550 591 aa3.76□□□□□ -1.81
SHH3YMR118C ALG2P43636 503 aa3.76□□□□□ -1.81
SHH3YMR118C YJR039WP47107 1121 aa3.76□□□□□ -1.81
SHH3YMR118C SGM1P47166 707 aa3.76□□□□□ -1.81
SHH3YMR118C YJR142WP47173 342 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms