RNA–Protein interactions for RNA: YMR117C

SPC24, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC24, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC24YMR117C MET12P46151 657 aa6.91□□□□□ -1.3
SPC24YMR117C VPS62P53285 467 aa6.91□□□□□ -1.3
SPC24YMR117C YGR283CP53336 341 aaPredicted RBP6.91□□□□□ -1.3
SPC24YMR117C ACK1Q07622 623 aaPredicted RBP6.91□□□□□ -1.3
SPC24YMR117C CDC6P09119 513 aa6.9□□□□□ -1.3
SPC24YMR117C GCV2P49095 1034 aa6.9□□□□□ -1.3
SPC24YMR117C NOP12Q08208 459 aaKnown RBP6.9□□□□□ -1.3
SPC24YMR117C RPS9AO13516 197 aaKnown RBP6.89□□□□□ -1.31
SPC24YMR117C RAD53P22216 821 aa6.89□□□□□ -1.31
SPC24YMR117C EMC1P25574 760 aa6.89□□□□□ -1.31
SPC24YMR117C SPC29P33419 253 aa6.89□□□□□ -1.31
SPC24YMR117C NOG2P53742 486 aaKnown RBP6.89□□□□□ -1.31
SPC24YMR117C YAP6Q03935 383 aa6.89□□□□□ -1.31
SPC24YMR117C HIS5P07172 385 aa6.88□□□□□ -1.31
SPC24YMR117C MSH2P25847 964 aa6.88□□□□□ -1.31
SPC24YMR117C CDC20P26309 610 aa6.88□□□□□ -1.31
SPC24YMR117C TYE7P33122 291 aaPredicted RBP6.88□□□□□ -1.31
SPC24YMR117C TOD6P34219 525 aa6.88□□□□□ -1.31
SPC24YMR117C CEP3P40969 608 aa6.88□□□□□ -1.31
SPC24YMR117C MAL11P53048 616 aa6.88□□□□□ -1.31
SPC24YMR117C REH1Q06709 432 aa6.88□□□□□ -1.31
SPC24YMR117C IRC24P40580 263 aa6.87□□□□□ -1.31
SPC24YMR117C YKR011CQ02209 353 aa6.87□□□□□ -1.31
SPC24YMR117C ATP25Q03153 612 aa6.87□□□□□ -1.31
SPC24YMR117C YDR514CQ04408 483 aa6.87□□□□□ -1.31
SPC24YMR117C GSY1P23337 708 aa6.86□□□□□ -1.31
SPC24YMR117C UGO1Q03327 502 aa6.86□□□□□ -1.31
SPC24YMR117C MET7Q08645 548 aa6.86□□□□□ -1.31
SPC24YMR117C MDM12Q92328 271 aa6.86□□□□□ -1.31
SPC24YMR117C PRE10P21242 288 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31not detected
SPC24YMR117C RPD3P32561 433 aa6.85□□□□□ -1.31
SPC24YMR117C YIL108WP40483 696 aaKnown RBP6.85□□□□□ -1.31
SPC24YMR117C URM1P40554 99 aaPredicted RBP6.85□□□□□ -1.31
SPC24YMR117C PUS2P53167 370 aa6.85□□□□□ -1.31
SPC24YMR117C HDA1P53973 706 aa6.85□□□□□ -1.31
SPC24YMR117C DAL7P21826 554 aa6.84□□□□□ -1.31
SPC24YMR117C THI80P35202 319 aa6.84□□□□□ -1.31
SPC24YMR117C UBP5P39944 805 aa6.84□□□□□ -1.31
SPC24YMR117C TAD1P53065 400 aa6.84□□□□□ -1.31
SPC24YMR117C SSL1Q04673 461 aaPredicted RBP6.84□□□□□ -1.31
SPC24YMR117C WHI4Q07655 649 aaKnown RBP6.84□□□□□ -1.31
SPC24YMR117C YLR358CO13565 187 aa6.83□□□□□ -1.32
SPC24YMR117C CYS3P31373 394 aaKnown RBP6.83□□□□□ -1.32
SPC24YMR117C DSS1P39112 969 aa6.83□□□□□ -1.32
SPC24YMR117C CHA4P43634 648 aa6.83□□□□□ -1.32
SPC24YMR117C YLR224WQ05947 369 aa6.83□□□□□ -1.32
SPC24YMR117C SED4P25365 1065 aa6.82□□□□□ -1.32
SPC24YMR117C PEX6P33760 1030 aa6.82□□□□□ -1.32
SPC24YMR117C RSC3Q06639 885 aa6.82□□□□□ -1.32
SPC24YMR117C NTG2Q08214 380 aa6.82□□□□□ -1.32
SPC24YMR117C FBP1P09201 348 aa6.81□□□□□ -1.32
SPC24YMR117C SAP190P36123 1033 aa6.81□□□□□ -1.32
SPC24YMR117C UPC2Q12151 913 aa6.81□□□□□ -1.32
SPC24YMR117C PRC1P00729 532 aa6.8□□□□□ -1.32
SPC24YMR117C STE11P23561 717 aa6.8□□□□□ -1.32
SPC24YMR117C MEF1P25039 761 aa6.8□□□□□ -1.32
SPC24YMR117C MTC2P34246 357 aa6.8□□□□□ -1.32
SPC24YMR117C PLB1P39105 664 aa6.8□□□□□ -1.32
SPC24YMR117C MNN1P39106 762 aa6.8□□□□□ -1.32
SPC24YMR117C SDP1P40479 209 aa6.8□□□□□ -1.32
SPC24YMR117C NCS6P53088 359 aa6.8□□□□□ -1.32
SPC24YMR117C LRS4Q04087 347 aaKnown RBP6.8□□□□□ -1.32
SPC24YMR117C NPC2Q12408 173 aa6.8□□□□□ -1.32
SPC24YMR117C VBA3P25594 458 aa6.79□□□□□ -1.32
SPC24YMR117C PER1P25625 357 aa6.79□□□□□ -1.32
SPC24YMR117C STO1P34160 861 aaKnown RBP6.79□□□□□ -1.32
SPC24YMR117C SET5P38890 526 aaKnown RBP6.79□□□□□ -1.32
SPC24YMR117C FPR3P38911 411 aaKnown RBP6.79□□□□□ -1.32
SPC24YMR117C TY4A-JP47023 414 aa6.79□□□□□ -1.32
SPC24YMR117C CLU1Q03690 1277 aaKnown RBP6.79□□□□□ -1.32
SPC24YMR117C UTP14Q04500 899 aaKnown RBP6.79□□□□□ -1.32
SPC24YMR117C TMA10Q06177 86 aa6.79□□□□□ -1.32
SPC24YMR117C YOR022CQ12204 715 aa6.79□□□□□ -1.32
SPC24YMR117C CDC9P04819 755 aa6.78□□□□□ -1.32
SPC24YMR117C YCL002CP25565 263 aa6.78□□□□□ -1.32
SPC24YMR117C LST4P34239 828 aa6.78□□□□□ -1.32
SPC24YMR117C CTF8P38877 133 aa6.78□□□□□ -1.32
SPC24YMR117C SHR5P41912 237 aa6.78□□□□□ -1.32
SPC24YMR117C ALY2P47029 1046 aa6.78□□□□□ -1.32
SPC24YMR117C ZDS1P50111 915 aaKnown RBP6.78□□□□□ -1.32
SPC24YMR117C DUS1P53759 423 aaKnown RBP6.78□□□□□ -1.32
SPC24YMR117C HAL9Q12180 1030 aa6.78□□□□□ -1.32
SPC24YMR117C KCS1Q12494 1050 aa6.78□□□□□ -1.32
SPC24YMR117C STE14P32584 239 aa6.77□□□□□ -1.33
SPC24YMR117C RLP7P40693 322 aaKnown RBP6.77□□□□□ -1.33
SPC24YMR117C DOS2P54858 310 aa6.77□□□□□ -1.33
SPC24YMR117C DIF1O13577 133 aa6.76□□□□□ -1.33
SPC24YMR117C FLR1P38124 548 aa6.76□□□□□ -1.33
SPC24YMR117C YHR078WP38799 552 aa6.76□□□□□ -1.33
SPC24YMR117C YBR182C-AQ8TGU6 64 aa6.76□□□□□ -1.33
SPC24YMR117C NOP14Q99207 810 aaKnown RBP6.76□□□□□ -1.33
SPC24YMR117C SRD1P09007 221 aa6.75□□□□□ -1.33
SPC24YMR117C MCD4P36051 919 aa6.75□□□□□ -1.33
SPC24YMR117C BRN1P38170 754 aa6.75□□□□□ -1.33
SPC24YMR117C MPT5P39016 859 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
SPC24YMR117C CAF16P43569 289 aa6.75□□□□□ -1.33
SPC24YMR117C HXT16P47185 567 aa6.75□□□□□ -1.33
SPC24YMR117C MNN10P50108 393 aaKnown RBP6.75□□□□□ -1.33
SPC24YMR117C GUP2Q08929 609 aa6.75□□□□□ -1.33
SPC24YMR117C SFP1P32432 683 aa6.74□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 95.2 ms