RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeast

Gene BER1, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BER1	YLR412W	YHR020W	P38708	688 aa	Known RBP	4.27	□□□□□ -1.73
BER1	YLR412W	CEP3	P40969	608 aa		4.27	□□□□□ -1.73
BER1	YLR412W	SUN4	P53616	420 aa		4.27	□□□□□ -1.73
BER1	YLR412W	FLC1	Q08967	793 aa		4.27	□□□□□ -1.73
BER1	YLR412W	PFK1	P16861	987 aa	Known RBP	4.26	□□□□□ -1.73
BER1	YLR412W	KAR4	P25583	335 aa		4.26	□□□□□ -1.73
BER1	YLR412W	YIL108W	P40483	696 aa	Known RBP	4.26	□□□□□ -1.73
BER1	YLR412W	AIM21	P40563	679 aa		4.26	□□□□□ -1.73
BER1	YLR412W	HUL4	P40985	892 aa		4.26	□□□□□ -1.73
BER1	YLR412W	NNF1	P47149	201 aa		4.26	□□□□□ -1.73
BER1	YLR412W	CTF4	Q01454	927 aa		4.26	□□□□□ -1.73
BER1	YLR412W	TAF8	Q03750	510 aa		4.26	□□□□□ -1.73
BER1	YLR412W	URN1	Q06525	465 aa	Known RBP	4.26	□□□□□ -1.73
BER1	YLR412W	YDL124W	Q07551	312 aa	Known RBP	4.26	□□□□□ -1.73
BER1	YLR412W	CAD1	P24813	409 aa	Known RBP	4.25	□□□□□ -1.73
BER1	YLR412W	STE14	P32584	239 aa		4.25	□□□□□ -1.73
BER1	YLR412W	SCT1	P32784	759 aa		4.25	□□□□□ -1.73
BER1	YLR412W	DEF1	P35732	738 aa	Known RBP	4.25	□□□□□ -1.73
BER1	YLR412W	RSP5	P39940	809 aa	Known RBP	4.25	□□□□□ -1.73
BER1	YLR412W	HDA1	P53973	706 aa		4.25	□□□□□ -1.73
BER1	YLR412W	TOM70	P07213	617 aa	Known RBP	4.24	□□□□□ -1.73
BER1	YLR412W	RAD53	P22216	821 aa		4.24	□□□□□ -1.73
BER1	YLR412W	URA1	P28272	314 aa	Predicted RBP	4.24	□□□□□ -1.73
BER1	YLR412W	TYE7	P33122	291 aa	Predicted RBP	4.24	□□□□□ -1.73
BER1	YLR412W	MSS4	P38994	779 aa		4.24	□□□□□ -1.73
BER1	YLR412W	UBP6	P43593	499 aa	Known RBP	4.24	□□□□□ -1.73
BER1	YLR412W	YKR011C	Q02209	353 aa		4.24	□□□□□ -1.73
BER1	YLR412W	NSE3	Q05541	303 aa		4.24	□□□□□ -1.73
BER1	YLR412W	BDF2	Q07442	638 aa		4.24	□□□□□ -1.73
BER1	YLR412W	ENV7	Q12003	364 aa		4.24	□□□□□ -1.73
BER1	YLR412W	CDC53	Q12018	815 aa	Known RBP	4.24	□□□□□ -1.73
BER1	YLR412W	LAS17	Q12446	633 aa		4.24	□□□□□ -1.73
BER1	YLR412W	RPS9A	O13516	197 aa	Known RBP	4.23	□□□□□ -1.73
BER1	YLR412W	FBP1	P09201	348 aa		4.23	□□□□□ -1.73
BER1	YLR412W	MPH2	P0CD99	609 aa		4.23	□□□□□ -1.73
BER1	YLR412W	BET3	P36149	193 aa		4.23	□□□□□ -1.73
BER1	YLR412W	KIN4	Q01919	800 aa		4.23	□□□□□ -1.73
BER1	YLR412W	AIM39	Q08223	395 aa		4.23	□□□□□ -1.73
BER1	YLR412W	ENB1	Q08299	606 aa		4.23	□□□□□ -1.73
BER1	YLR412W	GUP2	Q08929	609 aa		4.23	□□□□□ -1.73
BER1	YLR412W	CAN1	P04817	590 aa		4.22	□□□□□ -1.73
BER1	YLR412W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
BER1	YLR412W	HRR25	P29295	494 aa	Known RBP	4.22	□□□□□ -1.73
BER1	YLR412W	SDP1	P40479	209 aa		4.22	□□□□□ -1.73
BER1	YLR412W	NIT3	P49954	291 aa		4.22	□□□□□ -1.73
BER1	YLR412W	RTA1	P53047	317 aa		4.22	□□□□□ -1.73
BER1	YLR412W	GGA2	P38817	585 aa	Known RBP	4.21	□□□□□ -1.74
BER1	YLR412W	CHS7	P38843	316 aa		4.21	□□□□□ -1.74
BER1	YLR412W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
BER1	YLR412W	PUS2	P53167	370 aa		4.21	□□□□□ -1.74
BER1	YLR412W	SLU7	Q02775	382 aa	Known RBP	4.21	□□□□□ -1.74
BER1	YLR412W	YOL098C	Q12496	1037 aa		4.21	□□□□□ -1.74
BER1	YLR412W	GAL11	P19659	1081 aa		4.2	□□□□□ -1.74
BER1	YLR412W	DAL7	P21826	554 aa		4.2	□□□□□ -1.74
BER1	YLR412W	CYS3	P31373	394 aa	Known RBP	4.2	□□□□□ -1.74
BER1	YLR412W	SEC21	P32074	935 aa	Known RBP	4.2	□□□□□ -1.74
BER1	YLR412W	SRP40	P32583	406 aa	Predicted RBP	4.2	□□□□□ -1.74
BER1	YLR412W	CTF8	P38877	133 aa		4.2	□□□□□ -1.74
BER1	YLR412W	GYP8	P43570	497 aa		4.2	□□□□□ -1.74
BER1	YLR412W	YGR283C	P53336	341 aa	Predicted RBP	4.2	□□□□□ -1.74
BER1	YLR412W	NOG2	P53742	486 aa	Known RBP	4.2	□□□□□ -1.74
BER1	YLR412W	PEX19	Q07418	342 aa		4.2	□□□□□ -1.74
BER1	YLR412W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
BER1	YLR412W	YCL002C	P25565	263 aa		4.19	□□□□□ -1.74
BER1	YLR412W	EMC3	P36039	253 aa		4.19	□□□□□ -1.74
BER1	YLR412W	ALG2	P43636	503 aa		4.19	□□□□□ -1.74
BER1	YLR412W	BUL1	P48524	976 aa		4.19	□□□□□ -1.74
BER1	YLR412W	TAD1	P53065	400 aa		4.19	□□□□□ -1.74
BER1	YLR412W	YOR131C	Q12486	218 aa		4.19	□□□□□ -1.74
BER1	YLR412W	EFT1	P32324	842 aa	Known RBP	4.18	□□□□□ -1.74
BER1	YLR412W	YHR078W	P38799	552 aa		4.18	□□□□□ -1.74
BER1	YLR412W	DAM1	P53267	343 aa		4.18	□□□□□ -1.74
BER1	YLR412W	LRS4	Q04087	347 aa	Known RBP	4.18	□□□□□ -1.74
BER1	YLR412W	HAL9	Q12180	1030 aa		4.18	□□□□□ -1.74
BER1	YLR412W	YOR022C	Q12204	715 aa		4.18	□□□□□ -1.74
BER1	YLR412W	SWM1	Q12379	170 aa		4.18	□□□□□ -1.74
BER1	YLR412W	TRP4	P07285	380 aa	Predicted RBP	4.17	□□□□□ -1.74
BER1	YLR412W	TUB3	P09734	445 aa	Known RBP	4.17	□□□□□ -1.74
BER1	YLR412W	YKL091C	P33324	310 aa	Known RBP	4.17	□□□□□ -1.74
BER1	YLR412W	SAP190	P36123	1033 aa		4.17	□□□□□ -1.74
BER1	YLR412W	OCA5	P38738	679 aa		4.17	□□□□□ -1.74
BER1	YLR412W	DUS1	P53759	423 aa	Known RBP	4.17	□□□□□ -1.74
BER1	YLR412W	YDR514C	Q04408	483 aa		4.17	□□□□□ -1.74
BER1	YLR412W	PRC1	P00729	532 aa		4.16	□□□□□ -1.74
BER1	YLR412W	ERR1	P0CX10	437 aa		4.16	□□□□□ -1.74
BER1	YLR412W	ERR2	P0CX11	437 aa		4.16	□□□□□ -1.74
BER1	YLR412W	ERG4	P25340	473 aa		4.16	□□□□□ -1.74
BER1	YLR412W	CTF13	P35203	478 aa		4.16	□□□□□ -1.74
BER1	YLR412W	SUL1	P38359	859 aa		4.16	□□□□□ -1.74
BER1	YLR412W	ERG5	P54781	538 aa		4.16	□□□□□ -1.74
BER1	YLR412W	YLR040C	Q07988	224 aa		4.16	□□□□□ -1.74
BER1	YLR412W	PPM2	Q08282	695 aa		4.16	□□□□□ -1.74
BER1	YLR412W	MET7	Q08645	548 aa		4.16	□□□□□ -1.74
BER1	YLR412W	PRP4	P20053	465 aa	Known RBP	4.15	□□□□□ -1.75
BER1	YLR412W	KTR4	P38131	464 aa		4.15	□□□□□ -1.75
BER1	YLR412W	CHZ1	P40019	153 aa	Predicted RBP	4.15	□□□□□ -1.75
BER1	YLR412W	VHR1	P40522	640 aa		4.15	□□□□□ -1.75
BER1	YLR412W	REH1	Q06709	432 aa		4.15	□□□□□ -1.75
BER1	YLR412W	TRM13	Q12383	476 aa		4.15	□□□□□ -1.75
BER1	YLR412W	TRM11	Q12463	433 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 46 ms