RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C FUN30P31380 1131 aa5.51□□□□□ -1.53
USB1YLR132C DCG1P32460 244 aa5.51□□□□□ -1.53
USB1YLR132C SRP101P32916 621 aa5.51□□□□□ -1.53
USB1YLR132C BRN1P38170 754 aa5.51□□□□□ -1.53
USB1YLR132C CHA4P43634 648 aa5.51□□□□□ -1.53
USB1YLR132C GUS1P46655 708 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
USB1YLR132C YGR012WP53206 393 aa5.51□□□□□ -1.53
USB1YLR132C TAF2P23255 1407 aa5.5□□□□□ -1.53
USB1YLR132C CDC12P32468 407 aaKnown RBP5.5□□□□□ -1.53
USB1YLR132C YRO2P38079 344 aa5.5□□□□□ -1.53
USB1YLR132C MSE1P48525 536 aa5.5□□□□□ -1.53
USB1YLR132C TAF8Q03750 510 aa5.5□□□□□ -1.53
USB1YLR132C POB3Q04636 552 aaKnown RBP5.5□□□□□ -1.53
USB1YLR132C MYO2P19524 1574 aaKnown RBP5.5□□□□□ -1.53
USB1YLR132C TOM70P07213 617 aaKnown RBP5.49□□□□□ -1.53
USB1YLR132C SPE1P08432 466 aa5.49□□□□□ -1.53
USB1YLR132C PMI40P29952 429 aaKnown RBP5.49□□□□□ -1.53
USB1YLR132C THI4P32318 326 aa5.49□□□□□ -1.53
USB1YLR132C TIM23P32897 222 aa5.49□□□□□ -1.53
USB1YLR132C SIT1P39980 628 aa5.49□□□□□ -1.53
USB1YLR132C SUN4P53616 420 aa5.49□□□□□ -1.53
USB1YLR132C ALG12P53730 551 aa5.49□□□□□ -1.53
USB1YLR132C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
USB1YLR132C YBR284WP38150 797 aa5.48□□□□□ -1.53
USB1YLR132C FPR3P38911 411 aaKnown RBP5.48□□□□□ -1.53
USB1YLR132C SLI1P53304 468 aa5.48□□□□□ -1.53
USB1YLR132C SFB2P53953 876 aa5.48□□□□□ -1.53
USB1YLR132C LCD1Q04377 747 aa5.48□□□□□ -1.53
USB1YLR132C HBN1Q96VH4 193 aa5.48□□□□□ -1.53
USB1YLR132C ESP1Q03018 1630 aa5.48□□□□□ -1.53
USB1YLR132C ESC1Q03661 1658 aaKnown RBP5.47□□□□□ -1.53
USB1YLR132C HSF1P10961 833 aa5.47□□□□□ -1.53
USB1YLR132C HBS1P32769 611 aaKnown RBP5.47□□□□□ -1.53
USB1YLR132C AIM21P40563 679 aa5.47□□□□□ -1.53
USB1YLR132C CCM1P48237 864 aaPredicted RBP5.47□□□□□ -1.53
USB1YLR132C DOS2P54858 310 aa5.47□□□□□ -1.53
USB1YLR132C UTP14Q04500 899 aaKnown RBP5.47□□□□□ -1.53
USB1YLR132C PPM2Q08282 695 aa5.47□□□□□ -1.53
USB1YLR132C YPR071WQ12346 211 aa5.47□□□□□ -1.53
USB1YLR132C KCS1Q12494 1050 aa5.47□□□□□ -1.53
USB1YLR132C BNI1P41832 1953 aa5.47□□□□□ -1.53
USB1YLR132C RPP2AP05319 106 aaKnown RBP5.46□□□□□ -1.54
USB1YLR132C DEF1P35732 738 aaKnown RBP5.46□□□□□ -1.54
USB1YLR132C EXG2P52911 562 aa5.46□□□□□ -1.54
USB1YLR132C MET5P47169 1442 aa5.46□□□□□ -1.54
USB1YLR132C UFD4P33202 1483 aa5.45□□□□□ -1.54
USB1YLR132C PET10P36139 283 aa5.45□□□□□ -1.54
USB1YLR132C YKR078WP36158 585 aaKnown RBP5.45□□□□□ -1.54
USB1YLR132C MSS4P38994 779 aa5.45□□□□□ -1.54
USB1YLR132C HSV2P50079 448 aaPredicted RBP5.45□□□□□ -1.54
USB1YLR132C PSP2P50109 593 aaKnown RBP5.45□□□□□ -1.54
USB1YLR132C YPR196WQ06595 470 aa5.45□□□□□ -1.54
USB1YLR132C WHI4Q07655 649 aaKnown RBP5.45□□□□□ -1.54
USB1YLR132C CDC25P04821 1589 aa5.45□□□□□ -1.54
USB1YLR132C RPA190P10964 1664 aaKnown RBP5.44□□□□□ -1.54
USB1YLR132C ERR1P0CX10 437 aa5.44□□□□□ -1.54
USB1YLR132C ERR2P0CX11 437 aa5.44□□□□□ -1.54
USB1YLR132C REC104P33323 182 aa5.44□□□□□ -1.54
USB1YLR132C URM1P40554 99 aaPredicted RBP5.44□□□□□ -1.54
USB1YLR132C UBP6P43593 499 aaKnown RBP5.44□□□□□ -1.54
USB1YLR132C GYP7P48365 746 aa5.44□□□□□ -1.54
USB1YLR132C KIN4Q01919 800 aa5.44□□□□□ -1.54
USB1YLR132C NPC2Q12408 173 aa5.44□□□□□ -1.54
USB1YLR132C DNF1P32660 1571 aa5.43□□□□□ -1.54
USB1YLR132C LTE1P07866 1435 aa5.43□□□□□ -1.54
USB1YLR132C MSD1P15179 658 aaKnown RBP5.43□□□□□ -1.54
USB1YLR132C CDC48P25694 835 aaKnown RBP5.43□□□□□ -1.54
USB1YLR132C RPC82P32349 654 aa5.43□□□□□ -1.54
USB1YLR132C SPC42P36094 363 aa5.43□□□□□ -1.54
USB1YLR132C BET3P36149 193 aa5.43□□□□□ -1.54
USB1YLR132C CHS7P38843 316 aa5.43□□□□□ -1.54
USB1YLR132C NIT3P49954 291 aa5.43□□□□□ -1.54
USB1YLR132C RTA1P53047 317 aa5.43□□□□□ -1.54
USB1YLR132C NCS6P53088 359 aa5.43□□□□□ -1.54
USB1YLR132C TY1B-BRQ12193 1756 aa5.42□□□□□ -1.54
USB1YLR132C TY1B-GR3Q12316 1755 aa5.42□□□□□ -1.54
USB1YLR132C TY1B-ORQ92393 1755 aa5.42□□□□□ -1.54
USB1YLR132C TSL1P38427 1098 aaKnown RBP5.42□□□□□ -1.54
USB1YLR132C MNN1P39106 762 aa5.42□□□□□ -1.54
USB1YLR132C YER158CP40095 573 aa5.42□□□□□ -1.54
USB1YLR132C LAS17Q12446 633 aa5.42□□□□□ -1.54
USB1YLR132C TY2B-LR1P0C2J3 1770 aa5.42□□□□□ -1.54
USB1YLR132C TY2B-FP0CX63 1770 aa5.42□□□□□ -1.54
USB1YLR132C TY2B-GR2P0CX64 1770 aa5.42□□□□□ -1.54
USB1YLR132C TY2B-CP25384 1770 aa5.42□□□□□ -1.54
USB1YLR132C TY2B-DR2Q03494 1770 aa5.42□□□□□ -1.54
USB1YLR132C TY1B-DR1Q03855 1755 aa5.42□□□□□ -1.54
USB1YLR132C TY2B-DR3Q07791 1770 aaKnown RBP5.42□□□□□ -1.54
USB1YLR132C TY2B-OR1Q12113 1770 aa5.42□□□□□ -1.54
USB1YLR132C TY2B-DR1Q12472 1770 aa5.42□□□□□ -1.54
USB1YLR132C TY2B-OR2Q12501 1770 aa5.42□□□□□ -1.54
USB1YLR132C TOP3P13099 656 aa5.41□□□□□ -1.54
USB1YLR132C GSY1P23337 708 aa5.41□□□□□ -1.54
USB1YLR132C NPP1P25353 742 aa5.41□□□□□ -1.54
USB1YLR132C GDH3P39708 457 aa5.41□□□□□ -1.54
USB1YLR132C ALG2P43636 503 aa5.41□□□□□ -1.54
USB1YLR132C UGO1Q03327 502 aa5.41□□□□□ -1.54
USB1YLR132C URN1Q06525 465 aaKnown RBP5.41□□□□□ -1.54
USB1YLR132C PHR1P05066 565 aaKnown RBP RIP-Chip data5.4□□□□□ -1.54not detected
USB1YLR132C PFK1P16861 987 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 108 ms