RNA–Protein interactions for RNA: YLL050C

COF1, Transcript of Cofilin, involved in pH-dependent actin filament depolarization, yeastyeast

Gene COF1, Length 432 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
COF1YLL050C CIR2Q08822 631 aa2.35□□□□□ -2.03
COF1YLL050C ATE1P16639 503 aa2.34□□□□□ -2.03
COF1YLL050C DMC1P25453 334 aa2.34□□□□□ -2.03
COF1YLL050C YKL107WP34251 309 aa2.34□□□□□ -2.03
COF1YLL050C YGL176CP46945 554 aa2.34□□□□□ -2.03
COF1YLL050C PEX19Q07418 342 aa2.34□□□□□ -2.03
COF1YLL050C CDC34P14682 295 aa2.33□□□□□ -2.04
COF1YLL050C PTP1P25044 335 aa2.33□□□□□ -2.04
COF1YLL050C MOT2P34909 587 aaKnown RBP2.33□□□□□ -2.04
COF1YLL050C CTF13P35203 478 aa2.33□□□□□ -2.04
COF1YLL050C MET10P39692 1035 aa2.33□□□□□ -2.04
COF1YLL050C SNF7P39929 240 aaKnown RBP2.33□□□□□ -2.04
COF1YLL050C RSP5P39940 809 aaKnown RBP2.33□□□□□ -2.04
COF1YLL050C TYW3P53177 273 aa2.33□□□□□ -2.04
COF1YLL050C GIS2P53849 153 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
COF1YLL050C RIA1P53893 1110 aa2.33□□□□□ -2.04
COF1YLL050C RRP15Q06511 250 aaPredicted RBP2.33□□□□□ -2.04
COF1YLL050C CAF20P12962 161 aaKnown RBP2.32□□□□□ -2.04
COF1YLL050C HOM2P13663 365 aaKnown RBP2.32□□□□□ -2.04
COF1YLL050C NPP2P39997 493 aa2.32□□□□□ -2.04
COF1YLL050C SEC21P32074 935 aaKnown RBP2.31□□□□□ -2.04
COF1YLL050C CDC12P32468 407 aaKnown RBP2.31□□□□□ -2.04
COF1YLL050C PIN4P34217 668 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
COF1YLL050C SAH1P39954 449 aaKnown RBP2.31□□□□□ -2.04
COF1YLL050C NET1P47035 1189 aa2.31□□□□□ -2.04
COF1YLL050C SPO20Q04359 397 aa2.31□□□□□ -2.04
COF1YLL050C PET112P33893 541 aa2.3□□□□□ -2.04
COF1YLL050C LTP1P40347 161 aa2.3□□□□□ -2.04
COF1YLL050C YJL163CP46996 555 aa2.3□□□□□ -2.04
COF1YLL050C SFB2P53953 876 aa2.3□□□□□ -2.04
COF1YLL050C SRP1Q02821 542 aaKnown RBP2.3□□□□□ -2.04
COF1YLL050C YML020WQ03722 664 aa2.3□□□□□ -2.04
COF1YLL050C CRR1Q05790 422 aa2.3□□□□□ -2.04
COF1YLL050C TRM11Q12463 433 aa2.3□□□□□ -2.04
COF1YLL050C MNR2P35724 969 aa2.29□□□□□ -2.04
COF1YLL050C YKR078WP36158 585 aaKnown RBP2.29□□□□□ -2.04
COF1YLL050C GYP7P48365 746 aa2.29□□□□□ -2.04
COF1YLL050C RAI1P53063 387 aaKnown RBP2.29□□□□□ -2.04
COF1YLL050C DAM1P53267 343 aa2.29□□□□□ -2.04
COF1YLL050C YLR225CQ05948 407 aaKnown RBP2.29□□□□□ -2.04
COF1YLL050C NOP8Q08287 484 aaPredicted RBP2.29□□□□□ -2.04
COF1YLL050C YLR149CQ99296 730 aa2.29□□□□□ -2.04
COF1YLL050C ASF1P32447 279 aa2.28□□□□□ -2.04
COF1YLL050C EMP70P32802 667 aa2.28□□□□□ -2.04
COF1YLL050C YBR238CP38330 731 aaKnown RBP2.28□□□□□ -2.04
COF1YLL050C TSL1P38427 1098 aaKnown RBP2.28□□□□□ -2.04
COF1YLL050C MUP1P50276 574 aa2.28□□□□□ -2.04
COF1YLL050C YGR053CP53234 283 aa2.28□□□□□ -2.04
COF1YLL050C AIM44Q99299 758 aa2.28□□□□□ -2.04
COF1YLL050C RPN13O13563 156 aa2.27□□□□□ -2.05
COF1YLL050C FBP1P09201 348 aa2.27□□□□□ -2.05
COF1YLL050C VPS34P22543 875 aa2.27□□□□□ -2.05
COF1YLL050C YBR053CP38235 358 aa2.27□□□□□ -2.05
COF1YLL050C YEL020CP39994 560 aa2.27□□□□□ -2.05
COF1YLL050C KRI1P42846 591 aaKnown RBP2.27□□□□□ -2.05
COF1YLL050C YKE2P52553 114 aa2.27□□□□□ -2.05
COF1YLL050C ESC2Q06340 456 aa2.27□□□□□ -2.05
COF1YLL050C YPR196WQ06595 470 aa2.27□□□□□ -2.05
COF1YLL050C OSW1Q08692 278 aa2.27□□□□□ -2.05
COF1YLL050C AGP1P25376 633 aa2.26□□□□□ -2.05
COF1YLL050C CDC48P25694 835 aaKnown RBP2.26□□□□□ -2.05
COF1YLL050C SBA1P28707 216 aaKnown RBP2.26□□□□□ -2.05
COF1YLL050C HEM3P28789 327 aa2.26□□□□□ -2.05
COF1YLL050C CBR1P38626 284 aaKnown RBP2.26□□□□□ -2.05
COF1YLL050C YJL206CP39529 758 aa2.26□□□□□ -2.05
COF1YLL050C SDP1P40479 209 aa2.26□□□□□ -2.05
COF1YLL050C FKH2P41813 862 aa2.26□□□□□ -2.05
COF1YLL050C GUS1P46655 708 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
COF1YLL050C DUS3Q06053 668 aaKnown RBP2.26□□□□□ -2.05
COF1YLL050C TAF3Q12297 353 aa2.26□□□□□ -2.05
COF1YLL050C NOT3P06102 836 aaKnown RBP2.25□□□□□ -2.05
COF1YLL050C TUB3P09734 445 aaKnown RBP2.25□□□□□ -2.05
COF1YLL050C ABD1P32783 436 aaPredicted RBP2.25□□□□□ -2.05
COF1YLL050C STE13P33894 931 aa2.25□□□□□ -2.05
COF1YLL050C CTF8P38877 133 aa2.25□□□□□ -2.05
COF1YLL050C XBP1P40489 647 aa2.25□□□□□ -2.05
COF1YLL050C FAA4P47912 694 aaKnown RBP2.25□□□□□ -2.05
COF1YLL050C SSL2Q00578 843 aa2.25□□□□□ -2.05
COF1YLL050C OYE2Q03558 400 aaKnown RBP2.25□□□□□ -2.05
COF1YLL050C SGO1Q08490 590 aa2.25□□□□□ -2.05
COF1YLL050C GEP3Q08622 556 aa2.25□□□□□ -2.05
COF1YLL050C MBP1P39678 833 aa2.24□□□□□ -2.05
COF1YLL050C NOP7P53261 605 aaKnown RBP2.24□□□□□ -2.05
COF1YLL050C VPS30Q02948 557 aa2.24□□□□□ -2.05
COF1YLL050C SSL1Q04673 461 aaPredicted RBP2.24□□□□□ -2.05
COF1YLL050C NPP1P25353 742 aa2.23□□□□□ -2.05
COF1YLL050C AFR1P33304 620 aa2.23□□□□□ -2.05
COF1YLL050C HRB1P38922 454 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
COF1YLL050C CCT7P42943 550 aaKnown RBP2.23□□□□□ -2.05
COF1YLL050C YPL068CQ02749 293 aa2.23□□□□□ -2.05
COF1YLL050C VPS16Q03308 798 aa2.23□□□□□ -2.05
COF1YLL050C SHE9Q04172 456 aa2.23□□□□□ -2.05
COF1YLL050C SWM1Q12379 170 aa2.23□□□□□ -2.05
COF1YLL050C PPH3P32345 308 aa2.22□□□□□ -2.05
COF1YLL050C RPP1P38786 293 aa2.22□□□□□ -2.05
COF1YLL050C PAC2P39937 518 aa2.22□□□□□ -2.05
COF1YLL050C SIT1P39980 628 aa2.22□□□□□ -2.05
COF1YLL050C YIL108WP40483 696 aaKnown RBP2.22□□□□□ -2.05
COF1YLL050C SNU71P53207 620 aaKnown RBP2.22□□□□□ -2.05
COF1YLL050C SMX3P54999 86 aaPredicted RBP2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 107.8 ms