RNA–Protein interactions for RNA: YKL119C

VPH2, Transcript of Integral membrane protein required for V-ATPase function, yeast

Gene VPH2, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPH2	YKL119C	IRC10	Q08118	586 aa		4.18	□□□□□ -1.74
VPH2	YKL119C	MTH1	P35198	433 aa		4.17	□□□□□ -1.74
VPH2	YKL119C	SDP1	P40479	209 aa		4.17	□□□□□ -1.74
VPH2	YKL119C	VPS30	Q02948	557 aa		4.17	□□□□□ -1.74
VPH2	YKL119C	RFA1	P22336	621 aa	Known RBP	4.16	□□□□□ -1.74
VPH2	YKL119C	SCT1	P32784	759 aa		4.16	□□□□□ -1.74
VPH2	YKL119C	SPC42	P36094	363 aa		4.16	□□□□□ -1.74
VPH2	YKL119C	FBP1	P09201	348 aa		4.15	□□□□□ -1.75
VPH2	YKL119C	TUB3	P09734	445 aa	Known RBP	4.15	□□□□□ -1.75
VPH2	YKL119C	MRP8	P35719	219 aa		4.15	□□□□□ -1.75
VPH2	YKL119C	PPS1	P38148	807 aa		4.15	□□□□□ -1.75
VPH2	YKL119C	CEP3	P40969	608 aa		4.15	□□□□□ -1.75
VPH2	YKL119C	FRE5	Q08908	694 aa		4.15	□□□□□ -1.75
VPH2	YKL119C	SWM1	Q12379	170 aa		4.15	□□□□□ -1.75
VPH2	YKL119C	TYE7	P33122	291 aa	Predicted RBP	4.14	□□□□□ -1.75
VPH2	YKL119C	CTF13	P35203	478 aa		4.14	□□□□□ -1.75
VPH2	YKL119C	PBY1	P38254	753 aa		4.14	□□□□□ -1.75
VPH2	YKL119C	SIT1	P39980	628 aa		4.14	□□□□□ -1.75
VPH2	YKL119C	MET3	P08536	511 aa		4.13	□□□□□ -1.75
VPH2	YKL119C	CTF8	P38877	133 aa		4.13	□□□□□ -1.75
VPH2	YKL119C	TOK1	P40310	691 aa		4.13	□□□□□ -1.75
VPH2	YKL119C	ELO3	P40319	345 aa		4.13	□□□□□ -1.75
VPH2	YKL119C	FKH2	P41813	862 aa		4.13	□□□□□ -1.75
VPH2	YKL119C	TPO2	P53283	614 aa		4.13	□□□□□ -1.75
VPH2	YKL119C	YKR011C	Q02209	353 aa		4.13	□□□□□ -1.75
VPH2	YKL119C	DLT1	Q04216	342 aa		4.13	□□□□□ -1.75
VPH2	YKL119C	TRM11	Q12463	433 aa		4.13	□□□□□ -1.75
VPH2	YKL119C	URA1	P28272	314 aa	Predicted RBP	4.12	□□□□□ -1.75
VPH2	YKL119C	HBS1	P32769	611 aa	Known RBP	4.12	□□□□□ -1.75
VPH2	YKL119C	STE5	P32917	917 aa		4.12	□□□□□ -1.75
VPH2	YKL119C	CUE2	P36075	443 aa	Known RBP	4.12	□□□□□ -1.75
VPH2	YKL119C	VAC8	P39968	578 aa		4.12	□□□□□ -1.75
VPH2	YKL119C	SDS3	P40505	327 aa		4.12	□□□□□ -1.75
VPH2	YKL119C	CCM1	P48237	864 aa	Predicted RBP	4.12	□□□□□ -1.75
VPH2	YKL119C	MRPS35	P53292	345 aa		4.12	□□□□□ -1.75
VPH2	YKL119C	HDA1	P53973	706 aa		4.12	□□□□□ -1.75
VPH2	YKL119C	BUL2	Q03758	920 aa	Known RBP	4.12	□□□□□ -1.75
VPH2	YKL119C	BDF2	Q07442	638 aa		4.12	□□□□□ -1.75
VPH2	YKL119C	HBT1	Q07653	1046 aa	Known RBP	4.12	□□□□□ -1.75
VPH2	YKL119C	IRR1	P40541	1150 aa		4.11	□□□□□ -1.75
VPH2	YKL119C	LCD1	Q04377	747 aa		4.11	□□□□□ -1.75
VPH2	YKL119C	YPR071W	Q12346	211 aa		4.11	□□□□□ -1.75
VPH2	YKL119C	RPS9A	O13516	197 aa	Known RBP	4.1	□□□□□ -1.75
VPH2	YKL119C	PRP4	P20053	465 aa	Known RBP	4.1	□□□□□ -1.75
VPH2	YKL119C	PEX2	P32800	271 aa		4.1	□□□□□ -1.75
VPH2	YKL119C	YBR284W	P38150	797 aa		4.1	□□□□□ -1.75
VPH2	YKL119C	RPP1	P38786	293 aa		4.1	□□□□□ -1.75
VPH2	YKL119C	SPF1	P39986	1215 aa	Known RBP	4.1	□□□□□ -1.75
VPH2	YKL119C	MUP1	P50276	574 aa		4.1	□□□□□ -1.75
VPH2	YKL119C	ALD6	P54115	500 aa	Known RBP	4.1	□□□□□ -1.75
VPH2	YKL119C	TDA5	Q06417	326 aa	Known RBP	4.1	□□□□□ -1.75
VPH2	YKL119C	MRH1	Q12117	320 aa	Predicted RBP	4.1	□□□□□ -1.75
VPH2	YKL119C	CAF20	P12962	161 aa	Known RBP	4.09	□□□□□ -1.75
VPH2	YKL119C	REC104	P33323	182 aa		4.09	□□□□□ -1.75
VPH2	YKL119C	YBR184W	P38299	523 aa		4.09	□□□□□ -1.75
VPH2	YKL119C	YHL017W	P38745	532 aa		4.09	□□□□□ -1.75
VPH2	YKL119C	YHR078W	P38799	552 aa		4.09	□□□□□ -1.75
VPH2	YKL119C	PFD1	P46988	109 aa		4.09	□□□□□ -1.75
VPH2	YKL119C	PUS2	P53167	370 aa		4.09	□□□□□ -1.75
VPH2	YKL119C	ADY4	Q05955	493 aa		4.09	□□□□□ -1.75
VPH2	YKL119C	PRP9	P19736	530 aa	Known RBP	4.08	□□□□□ -1.76
VPH2	YKL119C	VHR1	P40522	640 aa		4.08	□□□□□ -1.76
VPH2	YKL119C	ALR2	P43553	858 aa		4.08	□□□□□ -1.76
VPH2	YKL119C	DAS1	P47005	663 aa		4.08	□□□□□ -1.76
VPH2	YKL119C	CRR1	Q05790	422 aa		4.07	□□□□□ -1.76
VPH2	YKL119C	YBR053C	P38235	358 aa		4.06	□□□□□ -1.76
VPH2	YKL119C	DUS1	P53759	423 aa	Known RBP	4.06	□□□□□ -1.76
VPH2	YKL119C	UBX5	Q06682	500 aa		4.06	□□□□□ -1.76
VPH2	YKL119C	HAL9	Q12180	1030 aa		4.06	□□□□□ -1.76
VPH2	YKL119C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
VPH2	YKL119C	SUT2	Q12286	268 aa		4.06	□□□□□ -1.76
VPH2	YKL119C	MPH2	P0CD99	609 aa		4.05	□□□□□ -1.76
VPH2	YKL119C	TDP1	P38319	544 aa		4.05	□□□□□ -1.76
VPH2	YKL119C	PCL5	P38794	229 aa		4.05	□□□□□ -1.76
VPH2	YKL119C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
VPH2	YKL119C	ASI2	P53895	289 aa		4.05	□□□□□ -1.76
VPH2	YKL119C	PKH1	Q03407	766 aa		4.05	□□□□□ -1.76
VPH2	YKL119C	BNR1	P40450	1375 aa		4.04	□□□□□ -1.76
VPH2	YKL119C	MSD1	P15179	658 aa	Known RBP	4.04	□□□□□ -1.76
VPH2	YKL119C	CYS3	P31373	394 aa	Known RBP	4.04	□□□□□ -1.76
VPH2	YKL119C	CDC11	P32458	415 aa		4.04	□□□□□ -1.76
VPH2	YKL119C	PPZ2	P33329	710 aa		4.04	□□□□□ -1.76
VPH2	YKL119C	YJL163C	P46996	555 aa		4.04	□□□□□ -1.76
VPH2	YKL119C	FMP25	Q08023	583 aa		4.04	□□□□□ -1.76
VPH2	YKL119C	ENV7	Q12003	364 aa		4.04	□□□□□ -1.76
VPH2	YKL119C	YOR022C	Q12204	715 aa		4.04	□□□□□ -1.76
VPH2	YKL119C	GGA2	P38817	585 aa	Known RBP	4.03	□□□□□ -1.76
VPH2	YKL119C	SAK1	P38990	1142 aa		4.03	□□□□□ -1.76
VPH2	YKL119C	MUS81	Q04149	632 aa	Predicted RBP	4.03	□□□□□ -1.76
VPH2	YKL119C	IRC13	Q08630	104 aa		4.03	□□□□□ -1.76
VPH2	YKL119C	GFA1	P14742	717 aa	Known RBP	4.02	□□□□□ -1.77
VPH2	YKL119C	PET10	P36139	283 aa		4.02	□□□□□ -1.77
VPH2	YKL119C	PZF1	P39933	429 aa		4.02	□□□□□ -1.77
VPH2	YKL119C	UTP8	P53276	713 aa	Known RBP	4.02	□□□□□ -1.77
VPH2	YKL119C	NRG1	Q03125	231 aa		4.02	□□□□□ -1.77
VPH2	YKL119C	NDJ1	Q12366	352 aa		4.02	□□□□□ -1.77
VPH2	YKL119C	HBN1	Q96VH4	193 aa		4.02	□□□□□ -1.77
VPH2	YKL119C	TOP3	P13099	656 aa		4.01	□□□□□ -1.77
VPH2	YKL119C	DAL7	P21826	554 aa		4.01	□□□□□ -1.77
VPH2	YKL119C	SNM1	P40993	198 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms