RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W RPN3P40016 523 aaKnown RBP5.43□□□□□ -1.54
VPS29YHR012W AIM9P40053 627 aaKnown RBP5.43□□□□□ -1.54
VPS29YHR012W LAM5P43560 674 aa5.43□□□□□ -1.54
VPS29YHR012W CIT3P43635 486 aa5.43□□□□□ -1.54
VPS29YHR012W RTC4P53850 401 aa5.43□□□□□ -1.54
VPS29YHR012W ROD1Q02805 837 aa5.43□□□□□ -1.54
VPS29YHR012W PNG1Q02890 363 aa5.43□□□□□ -1.54
VPS29YHR012W TRS120Q04183 1289 aa5.43□□□□□ -1.54
VPS29YHR012W PIG1Q06216 648 aa5.43□□□□□ -1.54
VPS29YHR012W YLH47Q06493 454 aa5.43□□□□□ -1.54
VPS29YHR012W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
VPS29YHR012W SMC6Q12749 1114 aa5.43□□□□□ -1.54
VPS29YHR012W TOR2P32600 2474 aaKnown RBP5.42□□□□□ -1.54
VPS29YHR012W COX6P00427 148 aa5.42□□□□□ -1.54
VPS29YHR012W MBR1P23493 339 aa5.42□□□□□ -1.54
VPS29YHR012W ADK2P26364 225 aa5.42□□□□□ -1.54
VPS29YHR012W BIO2P32451 375 aa5.42□□□□□ -1.54
VPS29YHR012W DPH2P32461 534 aa5.42□□□□□ -1.54
VPS29YHR012W SKG6P32900 734 aaPredicted RBP5.42□□□□□ -1.54
VPS29YHR012W UBX7P38349 436 aa5.42□□□□□ -1.54
VPS29YHR012W PAC1P39946 494 aaKnown RBP5.42□□□□□ -1.54
VPS29YHR012W BUD6P41697 788 aa5.42□□□□□ -1.54
VPS29YHR012W YFL052WP43551 465 aa5.42□□□□□ -1.54
VPS29YHR012W EPL1P43572 832 aa5.42□□□□□ -1.54
VPS29YHR012W ROG3P43602 733 aa5.42□□□□□ -1.54
VPS29YHR012W YGR130CP53278 816 aa5.42□□□□□ -1.54
VPS29YHR012W DIP5P53388 608 aa5.42□□□□□ -1.54
VPS29YHR012W FAR11P53917 953 aa5.42□□□□□ -1.54
VPS29YHR012W DOT1Q04089 582 aaKnown RBP5.42□□□□□ -1.54
VPS29YHR012W NOC3Q07896 663 aaPredicted RBP5.42□□□□□ -1.54
VPS29YHR012W FRS2P15625 503 aaKnown RBP5.41□□□□□ -1.54
VPS29YHR012W TMT1P32643 299 aa5.41□□□□□ -1.54
VPS29YHR012W COT1P32798 439 aa5.41□□□□□ -1.54
VPS29YHR012W MRX3P38172 270 aa5.41□□□□□ -1.54
VPS29YHR012W DSF2P38213 736 aa5.41□□□□□ -1.54
VPS29YHR012W RFS1P38234 210 aaKnown RBP5.41□□□□□ -1.54
VPS29YHR012W APM2P38700 605 aa5.41□□□□□ -1.54
VPS29YHR012W STT3P39007 718 aaKnown RBP5.41□□□□□ -1.54
VPS29YHR012W ATG32P40458 529 aa5.41□□□□□ -1.54
VPS29YHR012W MOB1P40484 314 aa5.41□□□□□ -1.54
VPS29YHR012W YJL045WP47052 634 aa5.41□□□□□ -1.54
VPS29YHR012W SHE10P53075 577 aa5.41□□□□□ -1.54
VPS29YHR012W SDA1P53313 767 aaKnown RBP5.41□□□□□ -1.54
VPS29YHR012W CAF120P53836 1060 aa5.41□□□□□ -1.54
VPS29YHR012W FUS2Q05670 677 aa5.41□□□□□ -1.54
VPS29YHR012W HCR1Q05775 265 aaKnown RBP5.41□□□□□ -1.54
VPS29YHR012W MRI1Q06489 411 aaKnown RBP5.41□□□□□ -1.54
VPS29YHR012W YOR296WQ08748 1289 aa5.41□□□□□ -1.54
VPS29YHR012W HSP82P02829 709 aaKnown RBP5.4□□□□□ -1.54
VPS29YHR012W DBP5P20449 482 aaKnown RBP5.4□□□□□ -1.54
VPS29YHR012W PRP22P24384 1145 aaKnown RBP5.4□□□□□ -1.54
VPS29YHR012W PPZ1P26570 692 aa5.4□□□□□ -1.54
VPS29YHR012W CSE2P33308 149 aa5.4□□□□□ -1.54
VPS29YHR012W CCC2P38995 1004 aa5.4□□□□□ -1.54
VPS29YHR012W ACO2P39533 789 aa5.4□□□□□ -1.54
VPS29YHR012W SAD1P43589 448 aa5.4□□□□□ -1.54
VPS29YHR012W YGL081WP53156 320 aa5.4□□□□□ -1.54
VPS29YHR012W NCS2P53923 493 aaPredicted RBP5.4□□□□□ -1.54
VPS29YHR012W YML083CQ04526 418 aa5.4□□□□□ -1.54
VPS29YHR012W YLR407WQ06070 228 aa5.4□□□□□ -1.54
VPS29YHR012W ESC8Q08119 714 aa5.4□□□□□ -1.54
VPS29YHR012W RPS9AO13516 197 aaKnown RBP5.39□□□□□ -1.55
VPS29YHR012W SNF1P06782 633 aaKnown RBP5.39□□□□□ -1.55
VPS29YHR012W PBS2P08018 668 aa5.39□□□□□ -1.55
VPS29YHR012W CDC6P09119 513 aa5.39□□□□□ -1.55
VPS29YHR012W RNR2P09938 399 aaKnown RBP5.39□□□□□ -1.55
VPS29YHR012W KGD2P19262 463 aaPredicted RBP5.39□□□□□ -1.55
VPS29YHR012W CKA2P19454 339 aa5.39□□□□□ -1.55
VPS29YHR012W RSA4P25382 515 aaKnown RBP5.39□□□□□ -1.55
VPS29YHR012W RPC53P25441 422 aa5.39□□□□□ -1.55
VPS29YHR012W IMG2P25642 146 aaPredicted RBP5.39□□□□□ -1.55
VPS29YHR012W TRK2P28584 889 aa5.39□□□□□ -1.55
VPS29YHR012W VPH1P32563 840 aaKnown RBP5.39□□□□□ -1.55
VPS29YHR012W CCL1P37366 393 aa5.39□□□□□ -1.55
VPS29YHR012W SAF1P38352 637 aa5.39□□□□□ -1.55
VPS29YHR012W BFA1P47113 574 aa5.39□□□□□ -1.55
VPS29YHR012W RTT102P53330 157 aa5.39□□□□□ -1.55
VPS29YHR012W PGA2P53903 129 aa5.39□□□□□ -1.55
VPS29YHR012W YLR346CQ06139 101 aa5.39□□□□□ -1.55
VPS29YHR012W YLR257WQ06146 321 aaKnown RBP5.39□□□□□ -1.55
VPS29YHR012W ECM7Q06200 448 aa5.39□□□□□ -1.55
VPS29YHR012W FAB1P34756 2278 aa5.39□□□□□ -1.55
VPS29YHR012W YLR422WQ06409 1932 aa5.38□□□□□ -1.55
VPS29YHR012W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
VPS29YHR012W HAP2P06774 265 aa5.38□□□□□ -1.55
VPS29YHR012W ATP1P07251 545 aaKnown RBP5.38□□□□□ -1.55
VPS29YHR012W TRL1P09880 827 aaKnown RBP5.38□□□□□ -1.55
VPS29YHR012W GLN3P18494 730 aa5.38□□□□□ -1.55
VPS29YHR012W BET2P20133 325 aa5.38□□□□□ -1.55
VPS29YHR012W TTI1P36097 1038 aa5.38□□□□□ -1.55
VPS29YHR012W UBP13P38187 747 aa5.38□□□□□ -1.55
VPS29YHR012W PEX28P38848 579 aa5.38□□□□□ -1.55
VPS29YHR012W NUP82P40368 713 aa5.38□□□□□ -1.55
VPS29YHR012W CBK1P53894 756 aa5.38□□□□□ -1.55
VPS29YHR012W SEC5P89102 971 aa5.38□□□□□ -1.55
VPS29YHR012W EIS1Q05050 843 aaKnown RBP5.38□□□□□ -1.55
VPS29YHR012W ERF2Q06551 359 aa5.38□□□□□ -1.55
VPS29YHR012W DNL4Q08387 944 aaPredicted RBP5.38□□□□□ -1.55
VPS29YHR012W IES4Q08561 116 aa5.38□□□□□ -1.55
VPS29YHR012W GET3Q12154 354 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms