RNA–Protein interactions for RNA: YGR049W

SCM4, Transcript of Mitochondrial outer membrane protein of unknown function, yeast

Gene SCM4, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCM4	YGR049W	HDA1	P53973	706 aa		4.95	□□□□□ -1.62
SCM4	YGR049W	ORC1	P54784	914 aa	Predicted RBP	4.95	□□□□□ -1.62
SCM4	YGR049W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
SCM4	YGR049W	PLB1	P39105	664 aa		4.94	□□□□□ -1.62
SCM4	YGR049W	NUP82	P40368	713 aa		4.94	□□□□□ -1.62
SCM4	YGR049W	HIS5	P07172	385 aa		4.93	□□□□□ -1.62
SCM4	YGR049W	RFA1	P22336	621 aa	Known RBP	4.93	□□□□□ -1.62
SCM4	YGR049W	GGA2	P38817	585 aa	Known RBP	4.93	□□□□□ -1.62
SCM4	YGR049W	CEP3	P40969	608 aa		4.93	□□□□□ -1.62
SCM4	YGR049W	TY4A-J	P47023	414 aa		4.93	□□□□□ -1.62
SCM4	YGR049W	PNS1	Q12412	539 aa		4.93	□□□□□ -1.62
SCM4	YGR049W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
SCM4	YGR049W	YCL002C	P25565	263 aa		4.92	□□□□□ -1.62
SCM4	YGR049W	URA1	P28272	314 aa	Predicted RBP	4.92	□□□□□ -1.62
SCM4	YGR049W	RPC82	P32349	654 aa		4.92	□□□□□ -1.62
SCM4	YGR049W	CHA4	P43634	648 aa		4.92	□□□□□ -1.62
SCM4	YGR049W	YGR283C	P53336	341 aa	Predicted RBP	4.92	□□□□□ -1.62
SCM4	YGR049W	LRS4	Q04087	347 aa	Known RBP	4.92	□□□□□ -1.62
SCM4	YGR049W	KCS1	Q12494	1050 aa		4.92	□□□□□ -1.62
SCM4	YGR049W	GDH3	P39708	457 aa		4.91	□□□□□ -1.62
SCM4	YGR049W	YIL108W	P40483	696 aa	Known RBP	4.91	□□□□□ -1.62
SCM4	YGR049W	ALG2	P43636	503 aa		4.91	□□□□□ -1.62
SCM4	YGR049W	PSP2	P50109	593 aa	Known RBP	4.91	□□□□□ -1.62
SCM4	YGR049W	NOP12	Q08208	459 aa	Known RBP	4.91	□□□□□ -1.62
SCM4	YGR049W	UPC2	Q12151	913 aa		4.91	□□□□□ -1.62
SCM4	YGR049W	MPH2	P0CD99	609 aa		4.9	□□□□□ -1.63
SCM4	YGR049W	STE14	P32584	239 aa		4.9	□□□□□ -1.63
SCM4	YGR049W	CHZ1	P40019	153 aa	Predicted RBP	4.9	□□□□□ -1.63
SCM4	YGR049W	URM1	P40554	99 aa	Predicted RBP	4.9	□□□□□ -1.63
SCM4	YGR049W	TAD1	P53065	400 aa		4.9	□□□□□ -1.63
SCM4	YGR049W	NCS6	P53088	359 aa		4.9	□□□□□ -1.63
SCM4	YGR049W	MCM6	P53091	1017 aa	Known RBP	4.9	□□□□□ -1.63
SCM4	YGR049W	YKR011C	Q02209	353 aa		4.9	□□□□□ -1.63
SCM4	YGR049W	SLU7	Q02775	382 aa	Known RBP	4.9	□□□□□ -1.63
SCM4	YGR049W	NPC2	Q12408	173 aa		4.9	□□□□□ -1.63
SCM4	YGR049W	PHO8	P11491	566 aa		4.89	□□□□□ -1.63
SCM4	YGR049W	DAL7	P21826	554 aa		4.89	□□□□□ -1.63
SCM4	YGR049W	EMC3	P36039	253 aa		4.89	□□□□□ -1.63
SCM4	YGR049W	HSV2	P50079	448 aa	Predicted RBP	4.89	□□□□□ -1.63
SCM4	YGR049W	LAS17	Q12446	633 aa		4.89	□□□□□ -1.63
SCM4	YGR049W	TAD3	Q9URQ3	322 aa		4.89	□□□□□ -1.63
SCM4	YGR049W	FBP1	P09201	348 aa		4.88	□□□□□ -1.63
SCM4	YGR049W	RAD53	P22216	821 aa		4.88	□□□□□ -1.63
SCM4	YGR049W	MEF1	P25039	761 aa		4.88	□□□□□ -1.63
SCM4	YGR049W	PER1	P25625	357 aa		4.88	□□□□□ -1.63
SCM4	YGR049W	TYE7	P33122	291 aa	Predicted RBP	4.88	□□□□□ -1.63
SCM4	YGR049W	SPC29	P33419	253 aa		4.88	□□□□□ -1.63
SCM4	YGR049W	PHO23	P50947	330 aa		4.88	□□□□□ -1.63
SCM4	YGR049W	MET7	Q08645	548 aa		4.88	□□□□□ -1.63
SCM4	YGR049W	HAL9	Q12180	1030 aa		4.88	□□□□□ -1.63
SCM4	YGR049W	YOR022C	Q12204	715 aa		4.87	□□□□□ -1.63
SCM4	YGR049W	RPS9A	O13516	197 aa	Known RBP	4.86	□□□□□ -1.63
SCM4	YGR049W	KAR4	P25583	335 aa		4.86	□□□□□ -1.63
SCM4	YGR049W	CYS3	P31373	394 aa	Known RBP	4.86	□□□□□ -1.63
SCM4	YGR049W	SEC21	P32074	935 aa	Known RBP	4.86	□□□□□ -1.63
SCM4	YGR049W	TRM2	P33753	639 aa		4.86	□□□□□ -1.63
SCM4	YGR049W	MSS4	P38994	779 aa		4.86	□□□□□ -1.63
SCM4	YGR049W	SDP1	P40479	209 aa		4.86	□□□□□ -1.63
SCM4	YGR049W	EXG2	P52911	562 aa		4.86	□□□□□ -1.63
SCM4	YGR049W	RNH70	P53331	553 aa		4.86	□□□□□ -1.63
SCM4	YGR049W	PUS9	Q12069	462 aa		4.86	□□□□□ -1.63
SCM4	YGR049W	PRP4	P20053	465 aa	Known RBP	4.85	□□□□□ -1.63
SCM4	YGR049W	SED4	P25365	1065 aa		4.85	□□□□□ -1.63
SCM4	YGR049W	THI4	P32318	326 aa		4.85	□□□□□ -1.63
SCM4	YGR049W	HXT16	P47185	567 aa		4.85	□□□□□ -1.63
SCM4	YGR049W	NIT3	P49954	291 aa		4.85	□□□□□ -1.63
SCM4	YGR049W	MNN10	P50108	393 aa	Known RBP	4.85	□□□□□ -1.63
SCM4	YGR049W	VPS30	Q02948	557 aa		4.85	□□□□□ -1.63
SCM4	YGR049W	YLR125W	Q12138	136 aa		4.85	□□□□□ -1.63
SCM4	YGR049W	MON2	P48563	1636 aa	Predicted RBP	4.85	□□□□□ -1.63
SCM4	YGR049W	CDC9	P04819	755 aa		4.84	□□□□□ -1.63
SCM4	YGR049W	ATG19	P35193	415 aa		4.84	□□□□□ -1.63
SCM4	YGR049W	CTF8	P38877	133 aa		4.84	□□□□□ -1.63
SCM4	YGR049W	NOG2	P53742	486 aa	Known RBP	4.84	□□□□□ -1.63
SCM4	YGR049W	DUS1	P53759	423 aa	Known RBP	4.84	□□□□□ -1.63
SCM4	YGR049W	TUB3	P09734	445 aa	Known RBP	4.83	□□□□□ -1.64
SCM4	YGR049W	STE11	P23561	717 aa		4.83	□□□□□ -1.64
SCM4	YGR049W	PUS2	P53167	370 aa		4.83	□□□□□ -1.64
SCM4	YGR049W	DAM1	P53267	343 aa		4.83	□□□□□ -1.64
SCM4	YGR049W	ALG12	P53730	551 aa		4.83	□□□□□ -1.64
SCM4	YGR049W	ATP25	Q03153	612 aa		4.83	□□□□□ -1.64
SCM4	YGR049W	ASM4	Q05166	528 aa		4.83	□□□□□ -1.64
SCM4	YGR049W	YDR338C	Q05497	695 aa		4.83	□□□□□ -1.64
SCM4	YGR049W	FPR4	Q06205	392 aa	Predicted RBP	4.83	□□□□□ -1.64
SCM4	YGR049W	RSC3	Q06639	885 aa		4.83	□□□□□ -1.64
SCM4	YGR049W	CAD1	P24813	409 aa	Known RBP	4.82	□□□□□ -1.64
SCM4	YGR049W	HCM1	P25364	564 aa		4.82	□□□□□ -1.64
SCM4	YGR049W	MSH2	P25847	964 aa		4.82	□□□□□ -1.64
SCM4	YGR049W	YHR078W	P38799	552 aa		4.82	□□□□□ -1.64
SCM4	YGR049W	DSS1	P39112	969 aa		4.82	□□□□□ -1.64
SCM4	YGR049W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
SCM4	YGR049W	MSE1	P48525	536 aa		4.82	□□□□□ -1.64
SCM4	YGR049W	SLI1	P53304	468 aa		4.82	□□□□□ -1.64
SCM4	YGR049W	YDR514C	Q04408	483 aa		4.82	□□□□□ -1.64
SCM4	YGR049W	NTG2	Q08214	380 aa		4.82	□□□□□ -1.64
SCM4	YGR049W	YBR182C-A	Q8TGU6	64 aa		4.82	□□□□□ -1.64
SCM4	YGR049W	MDM12	Q92328	271 aa		4.82	□□□□□ -1.64
SCM4	YGR049W	PRC1	P00729	532 aa		4.81	□□□□□ -1.64
SCM4	YGR049W	PMA1	P05030	918 aa	Known RBP	4.81	□□□□□ -1.64
SCM4	YGR049W	MET6	P05694	767 aa	Known RBP	4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 65.4 ms