RNA–Protein interactions for RNA: YER104W

RTT105, Transcript of Protein with a role in regulation of Ty1 transposition, yeastyeast

Gene RTT105, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT105YER104W RFC5P38251 354 aa3.84□□□□□ -1.79
RTT105YER104W CCC2P38995 1004 aa3.84□□□□□ -1.79
RTT105YER104W MBP1P39678 833 aa3.84□□□□□ -1.79
RTT105YER104W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
RTT105YER104W MAL11P53048 616 aa3.84□□□□□ -1.79
RTT105YER104W PBP1P53297 722 aaKnown RBP3.84□□□□□ -1.79
RTT105YER104W CEF1Q03654 590 aaPredicted RBP3.84□□□□□ -1.79
RTT105YER104W TMA17Q12513 150 aa3.84□□□□□ -1.79
RTT105YER104W YER152CP10356 443 aa3.83□□□□□ -1.8
RTT105YER104W HBS1P32769 611 aaKnown RBP3.83□□□□□ -1.8
RTT105YER104W CUE2P36075 443 aaKnown RBP3.83□□□□□ -1.8
RTT105YER104W VPS24P36095 224 aaKnown RBP3.83□□□□□ -1.8
RTT105YER104W VPS62P53285 467 aa3.83□□□□□ -1.8
RTT105YER104W YNL193WP53870 558 aa3.83□□□□□ -1.8
RTT105YER104W YAP6Q03935 383 aa3.83□□□□□ -1.8
RTT105YER104W VMS1Q04311 632 aaKnown RBP3.83□□□□□ -1.8
RTT105YER104W TMA7Q3E764 64 aaKnown RBP3.83□□□□□ -1.8
RTT105YER104W MDM12Q92328 271 aa3.83□□□□□ -1.8
RTT105YER104W HBN1Q96VH4 193 aa3.83□□□□□ -1.8
RTT105YER104W KAR1P11927 433 aa3.82□□□□□ -1.8
RTT105YER104W KIN2P13186 1147 aaKnown RBP3.82□□□□□ -1.8
RTT105YER104W GSY1P23337 708 aa3.82□□□□□ -1.8
RTT105YER104W DPB3P27344 201 aa3.82□□□□□ -1.8
RTT105YER104W UME1Q03010 460 aa3.82□□□□□ -1.8
RTT105YER104W THI73Q07904 523 aa3.82□□□□□ -1.8
RTT105YER104W GNT1Q12096 491 aa3.82□□□□□ -1.8
RTT105YER104W TOM70P07213 617 aaKnown RBP3.81□□□□□ -1.8
RTT105YER104W SIP5P40210 489 aaKnown RBP3.81□□□□□ -1.8
RTT105YER104W UBP6P43593 499 aaKnown RBP3.81□□□□□ -1.8
RTT105YER104W GUS1P46655 708 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
RTT105YER104W YRB30P53107 440 aaPredicted RBP3.81□□□□□ -1.8
RTT105YER104W SDA1P53313 767 aaKnown RBP3.81□□□□□ -1.8
RTT105YER104W YLR001CQ07895 862 aa3.81□□□□□ -1.8
RTT105YER104W SLX4Q12098 748 aa3.81□□□□□ -1.8
RTT105YER104W SVS1Q12254 260 aa3.81□□□□□ -1.8
RTT105YER104W ATP4P05626 244 aa3.8□□□□□ -1.8
RTT105YER104W TOP3P13099 656 aa3.8□□□□□ -1.8
RTT105YER104W MEF1P25039 761 aa3.8□□□□□ -1.8
RTT105YER104W PET10P36139 283 aa3.8□□□□□ -1.8
RTT105YER104W DSS1P39112 969 aa3.8□□□□□ -1.8
RTT105YER104W SIT1P39980 628 aa3.8□□□□□ -1.8
RTT105YER104W YFL054CP43549 646 aa3.8□□□□□ -1.8
RTT105YER104W GPG1P53130 126 aa3.8□□□□□ -1.8
RTT105YER104W SPP382Q06411 708 aaPredicted RBP3.8□□□□□ -1.8
RTT105YER104W YDL121CQ07541 149 aa3.8□□□□□ -1.8
RTT105YER104W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
RTT105YER104W YOR378WQ08902 515 aa3.8□□□□□ -1.8
RTT105YER104W FAP7Q12055 197 aaPredicted RBP3.8□□□□□ -1.8
RTT105YER104W THS1P04801 734 aaKnown RBP3.79□□□□□ -1.8
RTT105YER104W RPL11AP0C0W9 174 aaKnown RBP3.79□□□□□ -1.8
RTT105YER104W DBP2P24783 546 aaKnown RBP3.79□□□□□ -1.8
RTT105YER104W VBA3P25594 458 aa3.79□□□□□ -1.8
RTT105YER104W YEL1P34225 687 aa3.79□□□□□ -1.8
RTT105YER104W FUI1P38196 639 aa3.79□□□□□ -1.8
RTT105YER104W PNT1P38969 423 aa3.79□□□□□ -1.8
RTT105YER104W MGS1P40151 587 aa3.79□□□□□ -1.8
RTT105YER104W YJR120WP47157 116 aa3.79□□□□□ -1.8
RTT105YER104W GTF1P53260 183 aaPredicted RBP3.79□□□□□ -1.8
RTT105YER104W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
RTT105YER104W ECM16Q04217 1267 aaKnown RBP3.79□□□□□ -1.8
RTT105YER104W HFD1Q04458 532 aa3.79□□□□□ -1.8
RTT105YER104W YDR306CQ06640 478 aa3.79□□□□□ -1.8
RTT105YER104W RIB2Q12362 591 aaKnown RBP3.79□□□□□ -1.8
RTT105YER104W RPL11BQ3E757 174 aaPredicted RBP3.79□□□□□ -1.8
RTT105YER104W MSD1P15179 658 aaKnown RBP3.78□□□□□ -1.8
RTT105YER104W EMC1P25574 760 aa3.78□□□□□ -1.8
RTT105YER104W APL1P27351 700 aa3.78□□□□□ -1.8
RTT105YER104W AAR2P32357 355 aaPredicted RBP3.78□□□□□ -1.8
RTT105YER104W YBR284WP38150 797 aa3.78□□□□□ -1.8
RTT105YER104W YBR071WP38243 211 aa3.78□□□□□ -1.8
RTT105YER104W MXR1P40029 184 aa3.78□□□□□ -1.8
RTT105YER104W ALG2P43636 503 aa3.78□□□□□ -1.8
RTT105YER104W STU2P46675 888 aa3.78□□□□□ -1.8
RTT105YER104W DAS1P47005 663 aa3.78□□□□□ -1.8
RTT105YER104W GCV2P49095 1034 aa3.78□□□□□ -1.8
RTT105YER104W COG6P53959 839 aa3.78□□□□□ -1.8
RTT105YER104W TMA64Q04600 565 aaKnown RBP3.78□□□□□ -1.8
RTT105YER104W TRE2Q08693 809 aa3.78□□□□□ -1.8
RTT105YER104W HMI1Q12039 706 aa3.78□□□□□ -1.8
RTT105YER104W TRX2P22803 104 aaKnown RBP3.77□□□□□ -1.81
RTT105YER104W EUG1P32474 517 aa3.77□□□□□ -1.81
RTT105YER104W UGA2P38067 497 aa3.77□□□□□ -1.81
RTT105YER104W PEA2P40091 420 aa3.77□□□□□ -1.81
RTT105YER104W QRI1P43123 477 aaKnown RBP3.77□□□□□ -1.81
RTT105YER104W PEX14P53112 341 aa3.77□□□□□ -1.81
RTT105YER104W ATG16Q03818 150 aa3.77□□□□□ -1.81
RTT105YER104W SND1Q04007 877 aa3.77□□□□□ -1.81
RTT105YER104W ACM1Q08981 209 aa3.77□□□□□ -1.81
RTT105YER104W NYV1Q12255 253 aa3.77□□□□□ -1.81
RTT105YER104W GIN4Q12263 1142 aa3.77□□□□□ -1.81
RTT105YER104W NKP1Q12493 238 aa3.77□□□□□ -1.81
RTT105YER104W CDC9P04819 755 aa3.76□□□□□ -1.81
RTT105YER104W ACE2P21192 770 aa3.76□□□□□ -1.81
RTT105YER104W PPH3P32345 308 aa3.76□□□□□ -1.81
RTT105YER104W HIR1P32479 840 aa3.76□□□□□ -1.81
RTT105YER104W TRZ1P36159 838 aaPredicted RBP3.76□□□□□ -1.81
RTT105YER104W TYS1P36421 394 aaKnown RBP3.76□□□□□ -1.81
RTT105YER104W PLB1P39105 664 aa3.76□□□□□ -1.81
RTT105YER104W SAH1P39954 449 aaKnown RBP3.76□□□□□ -1.81
RTT105YER104W RRT14P40470 206 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms