RNA–Protein interactions for RNA: YER050C

RSM18, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM18, Length 417 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM18	YER050C	UBP6	P43593	499 aa	Known RBP	4.7	□□□□□ -1.66
RSM18	YER050C	NCS6	P53088	359 aa		4.7	□□□□□ -1.66
RSM18	YER050C	PUS2	P53167	370 aa		4.7	□□□□□ -1.66
RSM18	YER050C	TAF8	Q03750	510 aa		4.7	□□□□□ -1.66
RSM18	YER050C	NSE3	Q05541	303 aa		4.7	□□□□□ -1.66
RSM18	YER050C	BDF2	Q07442	638 aa		4.7	□□□□□ -1.66
RSM18	YER050C	WHI4	Q07655	649 aa	Known RBP	4.7	□□□□□ -1.66
RSM18	YER050C	KCS1	Q12494	1050 aa		4.7	□□□□□ -1.66
RSM18	YER050C	PFK1	P16861	987 aa	Known RBP	4.69	□□□□□ -1.66
RSM18	YER050C	CAD1	P24813	409 aa	Known RBP	4.69	□□□□□ -1.66
RSM18	YER050C	URA1	P28272	314 aa	Predicted RBP	4.69	□□□□□ -1.66
RSM18	YER050C	ERT1	P38140	529 aa		4.69	□□□□□ -1.66
RSM18	YER050C	YIL108W	P40483	696 aa	Known RBP	4.69	□□□□□ -1.66
RSM18	YER050C	GUP2	Q08929	609 aa		4.69	□□□□□ -1.66
RSM18	YER050C	PMA1	P05030	918 aa	Known RBP	4.68	□□□□□ -1.66
RSM18	YER050C	PMI40	P29952	429 aa	Known RBP	4.68	□□□□□ -1.66
RSM18	YER050C	RSP5	P39940	809 aa	Known RBP	4.68	□□□□□ -1.66
RSM18	YER050C	CHZ1	P40019	153 aa	Predicted RBP	4.68	□□□□□ -1.66
RSM18	YER050C	EXG2	P52911	562 aa		4.68	□□□□□ -1.66
RSM18	YER050C	DAM1	P53267	343 aa		4.68	□□□□□ -1.66
RSM18	YER050C	YKR011C	Q02209	353 aa		4.68	□□□□□ -1.66
RSM18	YER050C	ENB1	Q08299	606 aa		4.68	□□□□□ -1.66
RSM18	YER050C	ENV7	Q12003	364 aa		4.68	□□□□□ -1.66
RSM18	YER050C	UPC2	Q12151	913 aa		4.68	□□□□□ -1.66
RSM18	YER050C	NTO1	Q12311	748 aa		4.68	□□□□□ -1.66
RSM18	YER050C	CAN1	P04817	590 aa		4.67	□□□□□ -1.66
RSM18	YER050C	TOP3	P13099	656 aa		4.67	□□□□□ -1.66
RSM18	YER050C	NOG2	P53742	486 aa	Known RBP	4.67	□□□□□ -1.66
RSM18	YER050C	SSL1	Q04673	461 aa	Predicted RBP	4.67	□□□□□ -1.66
RSM18	YER050C	AIM39	Q08223	395 aa		4.67	□□□□□ -1.66
RSM18	YER050C	RPD3	P32561	433 aa		4.66	□□□□□ -1.66
RSM18	YER050C	ALG2	P43636	503 aa		4.66	□□□□□ -1.66
RSM18	YER050C	PHO23	P50947	330 aa		4.66	□□□□□ -1.66
RSM18	YER050C	KAR4	P25583	335 aa		4.65	□□□□□ -1.67
RSM18	YER050C	CYS3	P31373	394 aa	Known RBP	4.65	□□□□□ -1.67
RSM18	YER050C	YKL091C	P33324	310 aa	Known RBP	4.65	□□□□□ -1.67
RSM18	YER050C	SDP1	P40479	209 aa		4.65	□□□□□ -1.67
RSM18	YER050C	MSE1	P48525	536 aa		4.65	□□□□□ -1.67
RSM18	YER050C	REH1	Q06709	432 aa		4.65	□□□□□ -1.67
RSM18	YER050C	SWM1	Q12379	170 aa		4.65	□□□□□ -1.67
RSM18	YER050C	PNS1	Q12412	539 aa		4.65	□□□□□ -1.67
RSM18	YER050C	EMC3	P36039	253 aa		4.64	□□□□□ -1.67
RSM18	YER050C	SAP190	P36123	1033 aa		4.64	□□□□□ -1.67
RSM18	YER050C	BET3	P36149	193 aa		4.64	□□□□□ -1.67
RSM18	YER050C	AIM21	P40563	679 aa		4.64	□□□□□ -1.67
RSM18	YER050C	HDA1	P53973	706 aa		4.64	□□□□□ -1.67
RSM18	YER050C	YDR514C	Q04408	483 aa		4.64	□□□□□ -1.67
RSM18	YER050C	PEX19	Q07418	342 aa		4.64	□□□□□ -1.67
RSM18	YER050C	PRC1	P00729	532 aa		4.63	□□□□□ -1.67
RSM18	YER050C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
RSM18	YER050C	FBP1	P09201	348 aa		4.63	□□□□□ -1.67
RSM18	YER050C	DAL7	P21826	554 aa		4.63	□□□□□ -1.67
RSM18	YER050C	DEF1	P35732	738 aa	Known RBP	4.63	□□□□□ -1.67
RSM18	YER050C	OCA5	P38738	679 aa		4.63	□□□□□ -1.67
RSM18	YER050C	PUS9	Q12069	462 aa		4.63	□□□□□ -1.67
RSM18	YER050C	HRR25	P29295	494 aa	Known RBP	4.62	□□□□□ -1.67
RSM18	YER050C	NGG1	P32494	702 aa		4.62	□□□□□ -1.67
RSM18	YER050C	STE14	P32584	239 aa		4.62	□□□□□ -1.67
RSM18	YER050C	YHR078W	P38799	552 aa		4.62	□□□□□ -1.67
RSM18	YER050C	CTF8	P38877	133 aa		4.62	□□□□□ -1.67
RSM18	YER050C	GYP8	P43570	497 aa		4.62	□□□□□ -1.67
RSM18	YER050C	OSW7	P43611	510 aa		4.62	□□□□□ -1.67
RSM18	YER050C	RTA1	P53047	317 aa		4.62	□□□□□ -1.67
RSM18	YER050C	YGR283C	P53336	341 aa	Predicted RBP	4.62	□□□□□ -1.67
RSM18	YER050C	RPN4	Q03465	531 aa		4.62	□□□□□ -1.67
RSM18	YER050C	MSS4	P38994	779 aa		4.61	□□□□□ -1.67
RSM18	YER050C	SHR5	P41912	237 aa		4.61	□□□□□ -1.67
RSM18	YER050C	TAD1	P53065	400 aa		4.61	□□□□□ -1.67
RSM18	YER050C	EFT1	P32324	842 aa	Known RBP	4.6	□□□□□ -1.67
RSM18	YER050C	HSV2	P50079	448 aa	Predicted RBP	4.6	□□□□□ -1.67
RSM18	YER050C	ZDS1	P50111	915 aa	Known RBP	4.6	□□□□□ -1.67
RSM18	YER050C	SUN4	P53616	420 aa		4.6	□□□□□ -1.67
RSM18	YER050C	DUS1	P53759	423 aa	Known RBP	4.6	□□□□□ -1.67
RSM18	YER050C	PKH1	Q03407	766 aa		4.6	□□□□□ -1.67
RSM18	YER050C	RSC3	Q06639	885 aa		4.6	□□□□□ -1.67
RSM18	YER050C	HAL9	Q12180	1030 aa		4.6	□□□□□ -1.67
RSM18	YER050C	YOR022C	Q12204	715 aa		4.6	□□□□□ -1.67
RSM18	YER050C	TRM11	Q12463	433 aa		4.6	□□□□□ -1.67
RSM18	YER050C	TRP4	P07285	380 aa	Predicted RBP	4.59	□□□□□ -1.67
RSM18	YER050C	SEC21	P32074	935 aa	Known RBP	4.59	□□□□□ -1.67
RSM18	YER050C	SPC29	P33419	253 aa		4.59	□□□□□ -1.67
RSM18	YER050C	KTR4	P38131	464 aa		4.59	□□□□□ -1.67
RSM18	YER050C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
RSM18	YER050C	SET5	P38890	526 aa	Known RBP	4.59	□□□□□ -1.67
RSM18	YER050C	PZF1	P39933	429 aa		4.59	□□□□□ -1.67
RSM18	YER050C	ATP25	Q03153	612 aa		4.59	□□□□□ -1.67
RSM18	YER050C	MET7	Q08645	548 aa		4.59	□□□□□ -1.67
RSM18	YER050C	YLR125W	Q12138	136 aa		4.59	□□□□□ -1.67
RSM18	YER050C	RAD53	P22216	821 aa		4.58	□□□□□ -1.68
RSM18	YER050C	GDH3	P39708	457 aa		4.58	□□□□□ -1.68
RSM18	YER050C	KIN4	Q01919	800 aa		4.58	□□□□□ -1.68
RSM18	YER050C	LRS4	Q04087	347 aa	Known RBP	4.58	□□□□□ -1.68
RSM18	YER050C	DIF1	O13577	133 aa		4.57	□□□□□ -1.68
RSM18	YER050C	MET3	P08536	511 aa		4.57	□□□□□ -1.68
RSM18	YER050C	TIM23	P32897	222 aa		4.57	□□□□□ -1.68
RSM18	YER050C	CTF13	P35203	478 aa		4.57	□□□□□ -1.68
RSM18	YER050C	SUL1	P38359	859 aa		4.57	□□□□□ -1.68
RSM18	YER050C	VHR1	P40522	640 aa		4.57	□□□□□ -1.68
RSM18	YER050C	RLP7	P40693	322 aa	Known RBP	4.57	□□□□□ -1.68
RSM18	YER050C	PPM2	Q08282	695 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms