RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C CAD1P24813 409 aaKnown RBP3.79□□□□□ -1.8
SMB1YER029C RPC82P32349 654 aa3.79□□□□□ -1.8
SMB1YER029C SPC42P36094 363 aa3.79□□□□□ -1.8
SMB1YER029C GND2P53319 492 aa3.79□□□□□ -1.8
SMB1YER029C PPH3P32345 308 aa3.78□□□□□ -1.8
SMB1YER029C AAR2P32357 355 aaPredicted RBP3.78□□□□□ -1.8
SMB1YER029C TOK1P40310 691 aa3.78□□□□□ -1.8
SMB1YER029C URM1P40554 99 aaPredicted RBP3.78□□□□□ -1.8
SMB1YER029C ALR2P43553 858 aa3.78□□□□□ -1.8
SMB1YER029C YJL049WP47048 450 aa3.78□□□□□ -1.8
SMB1YER029C RNT1Q02555 471 aa3.78□□□□□ -1.8
SMB1YER029C MUK1Q02866 612 aa3.78□□□□□ -1.8
SMB1YER029C UBX5Q06682 500 aa3.78□□□□□ -1.8
SMB1YER029C HBN1Q96VH4 193 aa3.78□□□□□ -1.8
SMB1YER029C HSF1P10961 833 aa3.77□□□□□ -1.81
SMB1YER029C MSD1P15179 658 aaKnown RBP3.77□□□□□ -1.81
SMB1YER029C PEX2P32800 271 aa3.77□□□□□ -1.81
SMB1YER029C YRO2P38079 344 aa3.77□□□□□ -1.81
SMB1YER029C ERP6P53198 216 aa3.77□□□□□ -1.81
SMB1YER029C AFT2Q08957 416 aa3.77□□□□□ -1.81
SMB1YER029C TRP4P07285 380 aaPredicted RBP3.76□□□□□ -1.81
SMB1YER029C TOP3P13099 656 aa3.76□□□□□ -1.81
SMB1YER029C CDC48P25694 835 aaKnown RBP3.76□□□□□ -1.81
SMB1YER029C ATG19P35193 415 aa3.76□□□□□ -1.81
SMB1YER029C PET10P36139 283 aa3.76□□□□□ -1.81
SMB1YER029C OCA5P38738 679 aa3.76□□□□□ -1.81
SMB1YER029C TIM54P47045 478 aa3.76□□□□□ -1.81
SMB1YER029C HUL5P53119 910 aa3.76□□□□□ -1.81
SMB1YER029C TAF8Q03750 510 aa3.76□□□□□ -1.81
SMB1YER029C LCD1Q04377 747 aa3.76□□□□□ -1.81
SMB1YER029C WHI4Q07655 649 aaKnown RBP3.76□□□□□ -1.81
SMB1YER029C CIT1P00890 479 aa3.75□□□□□ -1.81
SMB1YER029C ADE8P04161 214 aa3.75□□□□□ -1.81
SMB1YER029C PPR1P07272 904 aaPredicted RBP3.75□□□□□ -1.81
SMB1YER029C STE14P32584 239 aa3.75□□□□□ -1.81
SMB1YER029C BET3P36149 193 aa3.75□□□□□ -1.81
SMB1YER029C YBR284WP38150 797 aa3.75□□□□□ -1.81
SMB1YER029C RTA1P53047 317 aa3.75□□□□□ -1.81
SMB1YER029C RAI1P53063 387 aaKnown RBP3.75□□□□□ -1.81
SMB1YER029C TPO2P53283 614 aa3.75□□□□□ -1.81
SMB1YER029C EAF1Q06337 982 aa3.75□□□□□ -1.81
SMB1YER029C NOT3P06102 836 aaKnown RBP3.74□□□□□ -1.81
SMB1YER029C FBP1P09201 348 aa3.74□□□□□ -1.81
SMB1YER029C HSP60P19882 572 aaKnown RBP3.74□□□□□ -1.81
SMB1YER029C NNF1P47149 201 aa3.74□□□□□ -1.81
SMB1YER029C CCM1P48237 864 aaPredicted RBP3.74□□□□□ -1.81
SMB1YER029C NSE3Q05541 303 aa3.74□□□□□ -1.81
SMB1YER029C SPO75Q07798 868 aa3.74□□□□□ -1.81
SMB1YER029C FLC1Q08967 793 aa3.74□□□□□ -1.81
SMB1YER029C UPC2Q12151 913 aa3.74□□□□□ -1.81
SMB1YER029C YPR071WQ12346 211 aa3.74□□□□□ -1.81
SMB1YER029C ALG7P07286 448 aa3.73□□□□□ -1.81
SMB1YER029C ARE1P25628 610 aa3.73□□□□□ -1.81
SMB1YER029C STE13P33894 931 aa3.73□□□□□ -1.81
SMB1YER029C RSP5P39940 809 aaKnown RBP3.73□□□□□ -1.81
SMB1YER029C SDS3P40505 327 aa3.73□□□□□ -1.81
SMB1YER029C UBP6P43593 499 aaKnown RBP3.73□□□□□ -1.81
SMB1YER029C YGR125WP53273 1036 aa3.73□□□□□ -1.81
SMB1YER029C SLU7Q02775 382 aaKnown RBP3.73□□□□□ -1.81
SMB1YER029C HOF1Q05080 669 aa3.73□□□□□ -1.81
SMB1YER029C YPR196WQ06595 470 aa3.73□□□□□ -1.81
SMB1YER029C HBT1Q07653 1046 aaKnown RBP3.73□□□□□ -1.81
SMB1YER029C ENV7Q12003 364 aa3.73□□□□□ -1.81
SMB1YER029C OSH2Q12451 1283 aa3.73□□□□□ -1.81
SMB1YER029C URA1P28272 314 aaPredicted RBP3.72□□□□□ -1.81
SMB1YER029C CDC11P32458 415 aa3.72□□□□□ -1.81
SMB1YER029C REC104P33323 182 aa3.72□□□□□ -1.81
SMB1YER029C HDA1P53973 706 aa3.72□□□□□ -1.81
SMB1YER029C SSL1Q04673 461 aaPredicted RBP3.72□□□□□ -1.81
SMB1YER029C YAP7Q08182 245 aa3.72□□□□□ -1.81
SMB1YER029C YOL098CQ12496 1037 aa3.72□□□□□ -1.81
SMB1YER029C STI1P15705 589 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
SMB1YER029C MDM10P18409 493 aa3.71□□□□□ -1.82
SMB1YER029C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
SMB1YER029C TRM13Q12383 476 aa3.71□□□□□ -1.82
SMB1YER029C ICT1Q12385 394 aa3.71□□□□□ -1.82
SMB1YER029C CAN1P04817 590 aa3.7□□□□□ -1.82
SMB1YER029C RPD3P32561 433 aa3.7□□□□□ -1.82
SMB1YER029C CTF8P38877 133 aa3.7□□□□□ -1.82
SMB1YER029C GYP8P43570 497 aa3.7□□□□□ -1.82
SMB1YER029C YKR011CQ02209 353 aa3.7□□□□□ -1.82
SMB1YER029C YDL124WQ07551 312 aaKnown RBP3.7□□□□□ -1.82
SMB1YER029C CDC53Q12018 815 aaKnown RBP3.7□□□□□ -1.82
SMB1YER029C BNR1P40450 1375 aa3.69□□□□□ -1.82
SMB1YER029C MPH2P0CD99 609 aa3.69□□□□□ -1.82
SMB1YER029C EMC3P36039 253 aa3.69□□□□□ -1.82
SMB1YER029C SDP1P40479 209 aa3.69□□□□□ -1.82
SMB1YER029C BUD6P41697 788 aa3.69□□□□□ -1.82
SMB1YER029C TY4A-JP47023 414 aa3.69□□□□□ -1.82
SMB1YER029C MAL11P53048 616 aa3.69□□□□□ -1.82
SMB1YER029C IMO32P53219 342 aa3.69□□□□□ -1.82
SMB1YER029C RPN4Q03465 531 aa3.69□□□□□ -1.82
SMB1YER029C COQ11Q05892 277 aa3.69□□□□□ -1.82
SMB1YER029C MRH1Q12117 320 aaPredicted RBP3.69□□□□□ -1.82
SMB1YER029C GAL11P19659 1081 aa3.68□□□□□ -1.82
SMB1YER029C SEC21P32074 935 aaKnown RBP3.68□□□□□ -1.82
SMB1YER029C PPZ2P33329 710 aa3.68□□□□□ -1.82
SMB1YER029C PBP2P38151 413 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
SMB1YER029C GGA2P38817 585 aaKnown RBP3.68□□□□□ -1.82
SMB1YER029C HUL4P40985 892 aa3.68□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 61.8 ms