RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W BUL2Q03758 920 aaKnown RBP5.12□□□□□ -1.59
PRE1YER012W URN1Q06525 465 aaKnown RBP5.12□□□□□ -1.59
PRE1YER012W UBX5Q06682 500 aa5.12□□□□□ -1.59
PRE1YER012W RFA1P22336 621 aaKnown RBP5.11□□□□□ -1.59
PRE1YER012W ERG4P25340 473 aa5.11□□□□□ -1.59
PRE1YER012W SNU71P53207 620 aaKnown RBP5.11□□□□□ -1.59
PRE1YER012W GRX1P25373 110 aaKnown RBP5.1□□□□□ -1.59
PRE1YER012W OAR1P35731 278 aa5.1□□□□□ -1.59
PRE1YER012W YBR238CP38330 731 aaKnown RBP5.1□□□□□ -1.59
PRE1YER012W GUP2Q08929 609 aa5.1□□□□□ -1.59
PRE1YER012W SPA2P23201 1466 aaKnown RBP5.09□□□□□ -1.59
PRE1YER012W SIT1P39980 628 aa5.09□□□□□ -1.59
PRE1YER012W HDA1P53973 706 aa5.09□□□□□ -1.59
PRE1YER012W MUK1Q02866 612 aa5.09□□□□□ -1.59
PRE1YER012W PEX19Q07418 342 aa5.09□□□□□ -1.59
PRE1YER012W FMP25Q08023 583 aa5.09□□□□□ -1.59
PRE1YER012W PAM1P37304 830 aaKnown RBP5.08□□□□□ -1.6
PRE1YER012W STB4P50104 949 aa5.08□□□□□ -1.6
PRE1YER012W UBA2P52488 636 aa5.08□□□□□ -1.6
PRE1YER012W TPO2P53283 614 aa5.08□□□□□ -1.6
PRE1YER012W ERG5P54781 538 aa5.08□□□□□ -1.6
PRE1YER012W VPS30Q02948 557 aa5.08□□□□□ -1.6
PRE1YER012W LCD1Q04377 747 aa5.08□□□□□ -1.6
PRE1YER012W TRP4P07285 380 aaPredicted RBP5.07□□□□□ -1.6
PRE1YER012W PRP9P19736 530 aaKnown RBP5.07□□□□□ -1.6
PRE1YER012W TYE7P33122 291 aaPredicted RBP5.07□□□□□ -1.6
PRE1YER012W REC104P33323 182 aa5.07□□□□□ -1.6
PRE1YER012W SDP1P40479 209 aa5.07□□□□□ -1.6
PRE1YER012W YKR011CQ02209 353 aa5.07□□□□□ -1.6
PRE1YER012W SSF2Q12153 453 aaPredicted RBP5.07□□□□□ -1.6
PRE1YER012W FBP1P09201 348 aa5.06□□□□□ -1.6
PRE1YER012W TUB3P09734 445 aaKnown RBP5.06□□□□□ -1.6
PRE1YER012W TOP3P13099 656 aa5.06□□□□□ -1.6
PRE1YER012W MSD1P15179 658 aaKnown RBP5.06□□□□□ -1.6
PRE1YER012W URA1P28272 314 aaPredicted RBP5.06□□□□□ -1.6
PRE1YER012W KTR4P38131 464 aa5.06□□□□□ -1.6
PRE1YER012W CCM1P48237 864 aaPredicted RBP5.06□□□□□ -1.6
PRE1YER012W EAF1Q06337 982 aa5.06□□□□□ -1.6
PRE1YER012W WRS1Q12109 432 aaKnown RBP5.06□□□□□ -1.6
PRE1YER012W THO2P53552 1597 aaKnown RBP5.06□□□□□ -1.6
PRE1YER012W PEP1P32319 1579 aa5.05□□□□□ -1.6
PRE1YER012W RPL8BP29453 256 aaKnown RBP5.05□□□□□ -1.6
PRE1YER012W MRPS35P53292 345 aa5.05□□□□□ -1.6
PRE1YER012W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
PRE1YER012W HBN1Q96VH4 193 aa5.05□□□□□ -1.6
PRE1YER012W RPS9AO13516 197 aaKnown RBP5.04□□□□□ -1.6
PRE1YER012W ALG7P07286 448 aa5.04□□□□□ -1.6
PRE1YER012W PRP4P20053 465 aaKnown RBP5.04□□□□□ -1.6
PRE1YER012W ARE1P25628 610 aa5.04□□□□□ -1.6
PRE1YER012W CTF8P38877 133 aa5.04□□□□□ -1.6
PRE1YER012W RNT1Q02555 471 aa5.04□□□□□ -1.6
PRE1YER012W TMN2Q04562 672 aa5.04□□□□□ -1.6
PRE1YER012W MDS3P53094 1487 aa5.04□□□□□ -1.6
PRE1YER012W BUD4P47136 1447 aa5.04□□□□□ -1.6
PRE1YER012W XRN1P22147 1528 aaKnown RBP5.03□□□□□ -1.6
PRE1YER012W UTP8P53276 713 aaKnown RBP5.03□□□□□ -1.6
PRE1YER012W MCH5Q08777 521 aa5.03□□□□□ -1.6
PRE1YER012W SWM1Q12379 170 aa5.03□□□□□ -1.6
PRE1YER012W RAD4P14736 754 aa5.02□□□□□ -1.61
PRE1YER012W CTF13P35203 478 aa5.02□□□□□ -1.61
PRE1YER012W YHR078WP38799 552 aa5.02□□□□□ -1.61
PRE1YER012W FKH2P41813 862 aa5.02□□□□□ -1.61
PRE1YER012W PUS2P53167 370 aa5.02□□□□□ -1.61
PRE1YER012W NAN1Q02931 896 aaKnown RBP5.02□□□□□ -1.61
PRE1YER012W ENV7Q12003 364 aa5.02□□□□□ -1.61
PRE1YER012W HAL9Q12180 1030 aa5.02□□□□□ -1.61
PRE1YER012W ATG2P53855 1592 aa5.01□□□□□ -1.61
PRE1YER012W CDC11P32458 415 aa5.01□□□□□ -1.61
PRE1YER012W PET10P36139 283 aa5.01□□□□□ -1.61
PRE1YER012W VHR1P40522 640 aa5.01□□□□□ -1.61
PRE1YER012W PPR1P07272 904 aaPredicted RBP5□□□□□ -1.61
PRE1YER012W YCL002CP25565 263 aa5□□□□□ -1.61
PRE1YER012W PPS1P38148 807 aa5□□□□□ -1.61
PRE1YER012W ERP6P53198 216 aa5□□□□□ -1.61
PRE1YER012W SPO75Q07798 868 aa5□□□□□ -1.61
PRE1YER012W FRE5Q08908 694 aa5□□□□□ -1.61
PRE1YER012W YOR022CQ12204 715 aa5□□□□□ -1.61
PRE1YER012W MPH2P0CD99 609 aa4.99□□□□□ -1.61
PRE1YER012W DAL7P21826 554 aa4.99□□□□□ -1.61
PRE1YER012W CYS3P31373 394 aaKnown RBP4.99□□□□□ -1.61
PRE1YER012W YPT53P36019 220 aa4.99□□□□□ -1.61
PRE1YER012W RPP1P38786 293 aa4.99□□□□□ -1.61
PRE1YER012W TIM54P47045 478 aa4.99□□□□□ -1.61
PRE1YER012W LRS4Q04087 347 aaKnown RBP4.99□□□□□ -1.61
PRE1YER012W OMS1Q06668 471 aa4.99□□□□□ -1.61
PRE1YER012W ACF2Q12168 779 aa4.99□□□□□ -1.61
PRE1YER012W TRM11Q12463 433 aa4.99□□□□□ -1.61
PRE1YER012W ELO3P40319 345 aa4.98□□□□□ -1.61
PRE1YER012W MUP1P50276 574 aa4.98□□□□□ -1.61
PRE1YER012W GND2P53319 492 aa4.98□□□□□ -1.61
PRE1YER012W DUS1P53759 423 aaKnown RBP4.98□□□□□ -1.61
PRE1YER012W YML122CQ03207 126 aa4.98□□□□□ -1.61
PRE1YER012W OSH2Q12451 1283 aa4.98□□□□□ -1.61
PRE1YER012W MET3P08536 511 aa4.97□□□□□ -1.61
PRE1YER012W GYP8P43570 497 aa4.97□□□□□ -1.61
PRE1YER012W TAD1P53065 400 aa4.97□□□□□ -1.61
PRE1YER012W YGR125WP53273 1036 aa4.97□□□□□ -1.61
PRE1YER012W DLT1Q04216 342 aa4.97□□□□□ -1.61
PRE1YER012W HSP60P19882 572 aaKnown RBP4.96□□□□□ -1.62
PRE1YER012W MTH1P35198 433 aa4.96□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms