RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT3YDR394W VPS38Q05919 439 aa6.66□□□□□ -1.34
RPT3YDR394W SMD2Q06217 110 aaKnown RBP6.66□□□□□ -1.34
RPT3YDR394W SPP382Q06411 708 aaPredicted RBP6.66□□□□□ -1.34
RPT3YDR394W VIP1Q06685 1146 aaKnown RBP6.66□□□□□ -1.34
RPT3YDR394W PSR2Q07949 397 aa6.66□□□□□ -1.34
RPT3YDR394W THI72Q08579 599 aa6.66□□□□□ -1.34
RPT3YDR394W RPL8AP17076 256 aaKnown RBP6.65□□□□□ -1.34
RPT3YDR394W STE11P23561 717 aa6.65□□□□□ -1.34
RPT3YDR394W AFG2P32794 780 aa6.65□□□□□ -1.34
RPT3YDR394W LTV1P34078 463 aa6.65□□□□□ -1.34
RPT3YDR394W CST26P38226 397 aa6.65□□□□□ -1.34
RPT3YDR394W QDR2P40474 542 aa6.65□□□□□ -1.34
RPT3YDR394W SBE2P42223 864 aaKnown RBP6.65□□□□□ -1.34
RPT3YDR394W EAF6P47128 113 aa6.65□□□□□ -1.34
RPT3YDR394W SKP1P52286 194 aa6.65□□□□□ -1.34
RPT3YDR394W LSB1P53281 241 aa6.65□□□□□ -1.34
RPT3YDR394W DSE4P53753 1117 aa6.65□□□□□ -1.34
RPT3YDR394W CUS1Q02554 436 aaPredicted RBP6.65□□□□□ -1.34
RPT3YDR394W HMI1Q12039 706 aa6.65□□□□□ -1.34
RPT3YDR394W FLO11P08640 1367 aa6.65□□□□□ -1.35
RPT3YDR394W TUF1P02992 437 aaKnown RBP6.64□□□□□ -1.35
RPT3YDR394W RPP1AP05318 106 aaPredicted RBP6.64□□□□□ -1.35
RPT3YDR394W SEC23P15303 768 aaKnown RBP6.64□□□□□ -1.35
RPT3YDR394W PDC5P16467 563 aaKnown RBP6.64□□□□□ -1.35
RPT3YDR394W ACE2P21192 770 aa6.64□□□□□ -1.35
RPT3YDR394W SEC65P29478 273 aa6.64□□□□□ -1.35
RPT3YDR394W YEL043WP32618 956 aa6.64□□□□□ -1.35
RPT3YDR394W PCH2P38126 564 aa6.64□□□□□ -1.35
RPT3YDR394W SPT8P38915 602 aa6.64□□□□□ -1.35
RPT3YDR394W YER156CP40093 338 aaKnown RBP6.64□□□□□ -1.35
RPT3YDR394W OSW7P43611 510 aa6.64□□□□□ -1.35
RPT3YDR394W APT1P49435 187 aaKnown RBP6.64□□□□□ -1.35
RPT3YDR394W ASE1P50275 885 aa6.64□□□□□ -1.35
RPT3YDR394W YDL124WQ07551 312 aaKnown RBP6.64□□□□□ -1.35
RPT3YDR394W HKR1P41809 1802 aa6.64□□□□□ -1.35
RPT3YDR394W PET123P17558 318 aa6.63□□□□□ -1.35
RPT3YDR394W ADP1P25371 1049 aa6.63□□□□□ -1.35
RPT3YDR394W PWP2P25635 923 aaKnown RBP6.63□□□□□ -1.35
RPT3YDR394W DPB3P27344 201 aa6.63□□□□□ -1.35
RPT3YDR394W RRP1P35178 278 aaPredicted RBP6.63□□□□□ -1.35
RPT3YDR394W YBR197CP38306 217 aa6.63□□□□□ -1.35
RPT3YDR394W ERG7P38604 731 aa6.63□□□□□ -1.35
RPT3YDR394W MIP6P38760 659 aaKnown RBP6.63□□□□□ -1.35
RPT3YDR394W RTT107P38850 1070 aa6.63□□□□□ -1.35
RPT3YDR394W CCC2P38995 1004 aa6.63□□□□□ -1.35
RPT3YDR394W CIT3P43635 486 aa6.63□□□□□ -1.35
RPT3YDR394W MAL13P53338 473 aa6.63□□□□□ -1.35
RPT3YDR394W CBK1P53894 756 aa6.63□□□□□ -1.35
RPT3YDR394W ERG5P54781 538 aa6.63□□□□□ -1.35
RPT3YDR394W BUL2Q03758 920 aaKnown RBP6.63□□□□□ -1.35
RPT3YDR394W YLR287CQ05881 355 aa6.63□□□□□ -1.35
RPT3YDR394W TLG2Q08144 397 aa6.63□□□□□ -1.35
RPT3YDR394W NEW1Q08972 1196 aaKnown RBP6.63□□□□□ -1.35
RPT3YDR394W ATG9Q12142 997 aa6.63□□□□□ -1.35
RPT3YDR394W PUS1Q12211 544 aaKnown RBP6.63□□□□□ -1.35
RPT3YDR394W SMC6Q12749 1114 aa6.63□□□□□ -1.35
RPT3YDR394W OM45P16547 393 aa6.62□□□□□ -1.35
RPT3YDR394W MRPL33P20084 86 aa6.62□□□□□ -1.35
RPT3YDR394W ISY1P21374 235 aaPredicted RBP6.62□□□□□ -1.35
RPT3YDR394W UBC1P21734 215 aaKnown RBP6.62□□□□□ -1.35
RPT3YDR394W PSO2P30620 661 aa6.62□□□□□ -1.35
RPT3YDR394W STO1P34160 861 aaKnown RBP6.62□□□□□ -1.35
RPT3YDR394W PET10P36139 283 aa6.62□□□□□ -1.35
RPT3YDR394W MCX1P38323 520 aaPredicted RBP6.62□□□□□ -1.35
RPT3YDR394W VFA1P40080 203 aa6.62□□□□□ -1.35
RPT3YDR394W NDC80P40460 691 aa6.62□□□□□ -1.35
RPT3YDR394W CAF130P53280 1122 aaPredicted RBP6.62□□□□□ -1.35
RPT3YDR394W MFM1Q02783 413 aa6.62□□□□□ -1.35
RPT3YDR394W CWC15Q03772 175 aaKnown RBP6.62□□□□□ -1.35
RPT3YDR394W UTP5Q04177 643 aaKnown RBP6.62□□□□□ -1.35
RPT3YDR394W PUN1Q06991 263 aa6.62□□□□□ -1.35
RPT3YDR394W SUB2Q07478 446 aaKnown RBP6.62□□□□□ -1.35
RPT3YDR394W YAP7Q08182 245 aa6.62□□□□□ -1.35
RPT3YDR394W PLP2Q12017 286 aa6.62□□□□□ -1.35
RPT3YDR394W PMA1P05030 918 aaKnown RBP6.61□□□□□ -1.35
RPT3YDR394W MSM1P22438 575 aa6.61□□□□□ -1.35
RPT3YDR394W GSY1P23337 708 aa6.61□□□□□ -1.35
RPT3YDR394W RRP43P25359 394 aaPredicted RBP6.61□□□□□ -1.35
RPT3YDR394W VMA3P25515 160 aa6.61□□□□□ -1.35
RPT3YDR394W ISW1P38144 1129 aa6.61□□□□□ -1.35
RPT3YDR394W YBL028CP38202 106 aa6.61□□□□□ -1.35
RPT3YDR394W PAN5P38787 379 aa6.61□□□□□ -1.35
RPT3YDR394W BUD16P39988 312 aa6.61□□□□□ -1.35
RPT3YDR394W NUP82P40368 713 aa6.61□□□□□ -1.35
RPT3YDR394W HFM1P51979 1187 aa6.61□□□□□ -1.35
RPT3YDR394W MTC3P53077 123 aa6.61□□□□□ -1.35
RPT3YDR394W SEN54Q02825 467 aaPredicted RBP6.61□□□□□ -1.35
RPT3YDR394W SML1Q04964 104 aa6.61□□□□□ -1.35
RPT3YDR394W FUS2Q05670 677 aa6.61□□□□□ -1.35
RPT3YDR394W ADY4Q05955 493 aa6.61□□□□□ -1.35
RPT3YDR394W RRP6Q12149 733 aaKnown RBP6.61□□□□□ -1.35
RPT3YDR394W YOL098CQ12496 1037 aa6.61□□□□□ -1.35
RPT3YDR394W NOP14Q99207 810 aaKnown RBP6.61□□□□□ -1.35
RPT3YDR394W YEL076C-AP0CX16 216 aa6.6□□□□□ -1.35
RPT3YDR394W YLR464WP0CX17 216 aa6.6□□□□□ -1.35
RPT3YDR394W SAM2P19358 384 aaKnown RBP6.6□□□□□ -1.35
RPT3YDR394W RAD53P22216 821 aa6.6□□□□□ -1.35
RPT3YDR394W RPC53P25441 422 aa6.6□□□□□ -1.35
RPT3YDR394W ISC10P32645 267 aa6.6□□□□□ -1.35
RPT3YDR394W YKL091CP33324 310 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms