RNA–Protein interactions for RNA: YDR092W

UBC13, Transcript of E2 ubiquitin-conjugating enzyme, yeast

Gene UBC13, Length 462 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC13	YDR092W	ENV7	Q12003	364 aa		4.66	□□□□□ -1.66
UBC13	YDR092W	RPS9A	O13516	197 aa	Known RBP	4.65	□□□□□ -1.67
UBC13	YDR092W	TOP3	P13099	656 aa		4.65	□□□□□ -1.67
UBC13	YDR092W	SED4	P25365	1065 aa		4.65	□□□□□ -1.67
UBC13	YDR092W	EMC3	P36039	253 aa		4.65	□□□□□ -1.67
UBC13	YDR092W	GIP4	P39732	760 aa		4.65	□□□□□ -1.67
UBC13	YDR092W	ALG2	P43636	503 aa		4.65	□□□□□ -1.67
UBC13	YDR092W	MCM6	P53091	1017 aa	Known RBP	4.65	□□□□□ -1.67
UBC13	YDR092W	NOG2	P53742	486 aa	Known RBP	4.65	□□□□□ -1.67
UBC13	YDR092W	URA1	P28272	314 aa	Predicted RBP	4.64	□□□□□ -1.67
UBC13	YDR092W	BET3	P36149	193 aa		4.64	□□□□□ -1.67
UBC13	YDR092W	ERT1	P38140	529 aa		4.64	□□□□□ -1.67
UBC13	YDR092W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
UBC13	YDR092W	BUD6	P41697	788 aa		4.64	□□□□□ -1.67
UBC13	YDR092W	NCS6	P53088	359 aa		4.64	□□□□□ -1.67
UBC13	YDR092W	YKR011C	Q02209	353 aa		4.64	□□□□□ -1.67
UBC13	YDR092W	TMA10	Q06177	86 aa		4.64	□□□□□ -1.67
UBC13	YDR092W	REH1	Q06709	432 aa		4.64	□□□□□ -1.67
UBC13	YDR092W	PPM2	Q08282	695 aa		4.64	□□□□□ -1.67
UBC13	YDR092W	YLR125W	Q12138	136 aa		4.64	□□□□□ -1.67
UBC13	YDR092W	FBP1	P09201	348 aa		4.63	□□□□□ -1.67
UBC13	YDR092W	CTS1	P29029	562 aa		4.63	□□□□□ -1.67
UBC13	YDR092W	DCG1	P32460	244 aa		4.63	□□□□□ -1.67
UBC13	YDR092W	SHM2	P37291	469 aa	Known RBP	4.63	□□□□□ -1.67
UBC13	YDR092W	YIL108W	P40483	696 aa	Known RBP	4.63	□□□□□ -1.67
UBC13	YDR092W	CEP3	P40969	608 aa		4.63	□□□□□ -1.67
UBC13	YDR092W	TAF1	P46677	1066 aa		4.63	□□□□□ -1.67
UBC13	YDR092W	RTA1	P53047	317 aa		4.63	□□□□□ -1.67
UBC13	YDR092W	PUS2	P53167	370 aa		4.63	□□□□□ -1.67
UBC13	YDR092W	YGR283C	P53336	341 aa	Predicted RBP	4.63	□□□□□ -1.67
UBC13	YDR092W	YDR514C	Q04408	483 aa		4.63	□□□□□ -1.67
UBC13	YDR092W	ENB1	Q08299	606 aa		4.63	□□□□□ -1.67
UBC13	YDR092W	UPC2	Q12151	913 aa		4.63	□□□□□ -1.67
UBC13	YDR092W	NPC2	Q12408	173 aa		4.63	□□□□□ -1.67
UBC13	YDR092W	KCS1	Q12494	1050 aa		4.63	□□□□□ -1.67
UBC13	YDR092W	SDP1	P40479	209 aa		4.62	□□□□□ -1.67
UBC13	YDR092W	EXG2	P52911	562 aa		4.62	□□□□□ -1.67
UBC13	YDR092W	HDA1	P53973	706 aa		4.62	□□□□□ -1.67
UBC13	YDR092W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
UBC13	YDR092W	HCM1	P25364	564 aa		4.61	□□□□□ -1.67
UBC13	YDR092W	CYS3	P31373	394 aa	Known RBP	4.61	□□□□□ -1.67
UBC13	YDR092W	CTF8	P38877	133 aa		4.61	□□□□□ -1.67
UBC13	YDR092W	NUP82	P40368	713 aa		4.61	□□□□□ -1.67
UBC13	YDR092W	ORC1	P54784	914 aa	Predicted RBP	4.61	□□□□□ -1.67
UBC13	YDR092W	ATP25	Q03153	612 aa		4.61	□□□□□ -1.67
UBC13	YDR092W	SSL1	Q04673	461 aa	Predicted RBP	4.61	□□□□□ -1.67
UBC13	YDR092W	GSF2	Q04697	403 aa	Known RBP	4.61	□□□□□ -1.67
UBC13	YDR092W	WHI4	Q07655	649 aa	Known RBP	4.61	□□□□□ -1.67
UBC13	YDR092W	PMA1	P05030	918 aa	Known RBP	4.6	□□□□□ -1.67
UBC13	YDR092W	PHO8	P11491	566 aa		4.6	□□□□□ -1.67
UBC13	YDR092W	STE14	P32584	239 aa		4.6	□□□□□ -1.67
UBC13	YDR092W	SPC29	P33419	253 aa		4.6	□□□□□ -1.67
UBC13	YDR092W	TRM2	P33753	639 aa		4.6	□□□□□ -1.67
UBC13	YDR092W	GDH3	P39708	457 aa		4.6	□□□□□ -1.67
UBC13	YDR092W	GYP8	P43570	497 aa		4.6	□□□□□ -1.67
UBC13	YDR092W	HSV2	P50079	448 aa	Predicted RBP	4.6	□□□□□ -1.67
UBC13	YDR092W	PFK1	P16861	987 aa	Known RBP	4.59	□□□□□ -1.67
UBC13	YDR092W	DAL7	P21826	554 aa		4.59	□□□□□ -1.67
UBC13	YDR092W	RAD53	P22216	821 aa		4.59	□□□□□ -1.67
UBC13	YDR092W	GSY1	P23337	708 aa		4.59	□□□□□ -1.67
UBC13	YDR092W	RPD3	P32561	433 aa		4.59	□□□□□ -1.67
UBC13	YDR092W	TIM23	P32897	222 aa		4.59	□□□□□ -1.67
UBC13	YDR092W	ZDS1	P50111	915 aa	Known RBP	4.59	□□□□□ -1.67
UBC13	YDR092W	CIT2	P08679	460 aa		4.58	□□□□□ -1.68
UBC13	YDR092W	PMI40	P29952	429 aa	Known RBP	4.58	□□□□□ -1.68
UBC13	YDR092W	SAP190	P36123	1033 aa		4.58	□□□□□ -1.68
UBC13	YDR092W	YHR078W	P38799	552 aa		4.58	□□□□□ -1.68
UBC13	YDR092W	TAD1	P53065	400 aa		4.58	□□□□□ -1.68
UBC13	YDR092W	POB3	Q04636	552 aa	Known RBP	4.58	□□□□□ -1.68
UBC13	YDR092W	MET7	Q08645	548 aa		4.58	□□□□□ -1.68
UBC13	YDR092W	NTO1	Q12311	748 aa		4.58	□□□□□ -1.68
UBC13	YDR092W	SWM1	Q12379	170 aa		4.58	□□□□□ -1.68
UBC13	YDR092W	PRC1	P00729	532 aa		4.57	□□□□□ -1.68
UBC13	YDR092W	TUB2	P02557	457 aa	Known RBP	4.57	□□□□□ -1.68
UBC13	YDR092W	ERR1	P0CX10	437 aa		4.57	□□□□□ -1.68
UBC13	YDR092W	ERR2	P0CX11	437 aa		4.57	□□□□□ -1.68
UBC13	YDR092W	KAR4	P25583	335 aa		4.57	□□□□□ -1.68
UBC13	YDR092W	NGG1	P32494	702 aa		4.57	□□□□□ -1.68
UBC13	YDR092W	DUS1	P53759	423 aa	Known RBP	4.57	□□□□□ -1.68
UBC13	YDR092W	UGO1	Q03327	502 aa		4.57	□□□□□ -1.68
UBC13	YDR092W	CAD1	P24813	409 aa	Known RBP	4.56	□□□□□ -1.68
UBC13	YDR092W	THI4	P32318	326 aa		4.56	□□□□□ -1.68
UBC13	YDR092W	SET5	P38890	526 aa	Known RBP	4.56	□□□□□ -1.68
UBC13	YDR092W	RLP7	P40693	322 aa	Known RBP	4.56	□□□□□ -1.68
UBC13	YDR092W	PEX19	Q07418	342 aa		4.56	□□□□□ -1.68
UBC13	YDR092W	AIM39	Q08223	395 aa		4.56	□□□□□ -1.68
UBC13	YDR092W	MDM12	Q92328	271 aa		4.56	□□□□□ -1.68
UBC13	YDR092W	MET6	P05694	767 aa	Known RBP	4.55	□□□□□ -1.68
UBC13	YDR092W	MSH2	P25847	964 aa		4.55	□□□□□ -1.68
UBC13	YDR092W	DEF1	P35732	738 aa	Known RBP	4.55	□□□□□ -1.68
UBC13	YDR092W	RRP14	P36080	434 aa	Known RBP	4.55	□□□□□ -1.68
UBC13	YDR092W	PZF1	P39933	429 aa		4.55	□□□□□ -1.68
UBC13	YDR092W	SHR5	P41912	237 aa		4.55	□□□□□ -1.68
UBC13	YDR092W	RSC3	Q06639	885 aa		4.55	□□□□□ -1.68
UBC13	YDR092W	HAL9	Q12180	1030 aa		4.55	□□□□□ -1.68
UBC13	YDR092W	YOR022C	Q12204	715 aa		4.55	□□□□□ -1.68
UBC13	YDR092W	TRM11	Q12463	433 aa		4.55	□□□□□ -1.68
UBC13	YDR092W	DIF1	O13577	133 aa		4.54	□□□□□ -1.68
UBC13	YDR092W	TRP4	P07285	380 aa	Predicted RBP	4.54	□□□□□ -1.68
UBC13	YDR092W	SEC21	P32074	935 aa	Known RBP	4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 100.4 ms