RNA–Protein interactions for RNA: YDR047W

HEM12, Transcript of Uroporphyrinogen decarboxylase, yeast

Gene HEM12, Length 1,089 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HEM12	YDR047W	MDR1	P53258	950 aa		11.75	□□□□□ -0.53
HEM12	YDR047W	ESBP6	P53918	673 aa		11.75	□□□□□ -0.53
HEM12	YDR047W	JIP4	Q03361	876 aa		11.75	□□□□□ -0.53
HEM12	YDR047W	DUS4	Q06063	367 aa		11.75	□□□□□ -0.53
HEM12	YDR047W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	11.74	□□□□□ -0.53	not detected
HEM12	YDR047W	BYE1	P36106	594 aa		11.74	□□□□□ -0.53
HEM12	YDR047W	SET5	P38890	526 aa	Known RBP	11.74	□□□□□ -0.53
HEM12	YDR047W	SMF1	P38925	575 aa		11.74	□□□□□ -0.53
HEM12	YDR047W	AVT1	P47082	602 aa		11.74	□□□□□ -0.53
HEM12	YDR047W	CDC53	Q12018	815 aa	Known RBP	11.74	□□□□□ -0.53
HEM12	YDR047W	OSH2	Q12451	1283 aa		11.74	□□□□□ -0.53
HEM12	YDR047W	DED1	P06634	604 aa	Known RBP	11.73	□□□□□ -0.53
HEM12	YDR047W	HVG1	P0CE11	249 aa		11.73	□□□□□ -0.53
HEM12	YDR047W	SSA4	P22202	642 aa	Known RBP	11.73	□□□□□ -0.53
HEM12	YDR047W	MUD1	P32605	298 aa	Known RBP	11.73	□□□□□ -0.53
HEM12	YDR047W	CCT4	P39078	528 aa	Known RBP	11.73	□□□□□ -0.53
HEM12	YDR047W	YGR021W	P53212	290 aa		11.73	□□□□□ -0.53
HEM12	YDR047W	RTT102	P53330	157 aa		11.73	□□□□□ -0.53
HEM12	YDR047W	RRB1	Q04225	511 aa	Known RBP	11.73	□□□□□ -0.53
HEM12	YDR047W	YMR321C	Q04898	105 aa		11.73	□□□□□ -0.53
HEM12	YDR047W	COQ9	Q05779	260 aa		11.73	□□□□□ -0.53
HEM12	YDR047W	TY3A-G	Q12173	290 aa		11.73	□□□□□ -0.53
HEM12	YDR047W	TY3A-I	Q99219	290 aa		11.73	□□□□□ -0.53
HEM12	YDR047W	TRP2	P00899	507 aa	Known RBP	11.72	□□□□□ -0.53
HEM12	YDR047W	KIC1	P38692	1080 aa		11.72	□□□□□ -0.53
HEM12	YDR047W	BTN2	P53286	410 aa		11.72	□□□□□ -0.53
HEM12	YDR047W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	11.72	□□□□□ -0.53	not detected
HEM12	YDR047W	VTC3	Q02725	835 aa		11.72	□□□□□ -0.53
HEM12	YDR047W	ATG23	Q06671	453 aa		11.72	□□□□□ -0.53
HEM12	YDR047W	GPI13	Q07830	1017 aa		11.72	□□□□□ -0.53
HEM12	YDR047W	VMA1	P17255	1071 aa	Known RBP	11.71	□□□□□ -0.53
HEM12	YDR047W	RPO26	P20435	155 aa		11.71	□□□□□ -0.53
HEM12	YDR047W	KIP1	P28742	1111 aa		11.71	□□□□□ -0.53
HEM12	YDR047W	RAD54	P32863	898 aa		11.71	□□□□□ -0.53
HEM12	YDR047W	EAF5	P39995	279 aa		11.71	□□□□□ -0.53
HEM12	YDR047W	SGM1	P47166	707 aa		11.71	□□□□□ -0.53
HEM12	YDR047W	YML082W	Q04533	649 aa	Known RBP	11.71	□□□□□ -0.53
HEM12	YDR047W	POB3	Q04636	552 aa	Known RBP	11.71	□□□□□ -0.53
HEM12	YDR047W	SIL1	Q08199	421 aa		11.71	□□□□□ -0.53
HEM12	YDR047W	IES4	Q08561	116 aa		11.71	□□□□□ -0.53
HEM12	YDR047W	MSC6	Q08818	692 aa	Known RBP	11.71	□□□□□ -0.53
HEM12	YDR047W	YLL058W	Q12198	575 aa		11.71	□□□□□ -0.53
HEM12	YDR047W	OSW2	Q12202	724 aa		11.71	□□□□□ -0.53
HEM12	YDR047W	YDL206W	Q12424	762 aa		11.71	□□□□□ -0.53
HEM12	YDR047W	CNS1	P33313	385 aa		11.7	□□□□□ -0.54
HEM12	YDR047W	NPP2	P39997	493 aa		11.7	□□□□□ -0.54
HEM12	YDR047W	SPR3	P41901	512 aa		11.7	□□□□□ -0.54
HEM12	YDR047W	RPS7B	P48164	190 aa	Known RBP	11.7	□□□□□ -0.54
HEM12	YDR047W	SHE10	P53075	577 aa		11.7	□□□□□ -0.54
HEM12	YDR047W	ENV11	P53246	860 aa		11.7	□□□□□ -0.54
HEM12	YDR047W	SYH1	Q02875	849 aa	Known RBP	11.7	□□□□□ -0.54
HEM12	YDR047W	UTP14	Q04500	899 aa	Known RBP	11.7	□□□□□ -0.54
HEM12	YDR047W	CST9	Q06032	482 aa		11.7	□□□□□ -0.54
HEM12	YDR047W	TRM11	Q12463	433 aa		11.7	□□□□□ -0.54
HEM12	YDR047W	SNF1	P06782	633 aa	Known RBP	11.69	□□□□□ -0.54
HEM12	YDR047W	PAP1	P29468	568 aa	Known RBP	11.69	□□□□□ -0.54
HEM12	YDR047W	EFT1	P32324	842 aa	Known RBP	11.69	□□□□□ -0.54
HEM12	YDR047W	RGT1	P32862	1170 aa		11.69	□□□□□ -0.54
HEM12	YDR047W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	11.69	□□□□□ -0.54	not detected
HEM12	YDR047W	ASH1	P34233	588 aa		11.69	□□□□□ -0.54
HEM12	YDR047W	MAD1	P40957	749 aa		11.69	□□□□□ -0.54
HEM12	YDR047W	KAP114	P53067	1004 aa		11.69	□□□□□ -0.54
HEM12	YDR047W	CWC22	P53333	577 aa	Known RBP	11.69	□□□□□ -0.54
HEM12	YDR047W	YMR114C	Q04471	368 aa	Known RBP	11.69	□□□□□ -0.54
HEM12	YDR047W	SLX4	Q12098	748 aa		11.69	□□□□□ -0.54
HEM12	YDR047W	ERG11	P10614	530 aa		11.68	□□□□□ -0.54
HEM12	YDR047W	GFA1	P14742	717 aa	Known RBP	11.68	□□□□□ -0.54
HEM12	YDR047W	YUR1	P26725	428 aa		11.68	□□□□□ -0.54
HEM12	YDR047W	RME1	P32338	300 aa	Known RBP	11.68	□□□□□ -0.54
HEM12	YDR047W	IRE1	P32361	1115 aa		11.68	□□□□□ -0.54
HEM12	YDR047W	APE3	P37302	537 aa	Known RBP	11.68	□□□□□ -0.54
HEM12	YDR047W	HSH155	P49955	971 aa	Known RBP	11.68	□□□□□ -0.54
HEM12	YDR047W	YNL146W	P53906	100 aa		11.68	□□□□□ -0.54
HEM12	YDR047W	CDC33	P07260	213 aa	Known RBP	11.67	□□□□□ -0.54
HEM12	YDR047W	SEC21	P32074	935 aa	Known RBP	11.67	□□□□□ -0.54
HEM12	YDR047W	TIM23	P32897	222 aa		11.67	□□□□□ -0.54
HEM12	YDR047W	BLI1	P35727	113 aa		11.67	□□□□□ -0.54
HEM12	YDR047W	YKL050C	P35736	922 aa		11.67	□□□□□ -0.54
HEM12	YDR047W	TRZ1	P36159	838 aa	Predicted RBP	11.67	□□□□□ -0.54
HEM12	YDR047W	PSP2	P50109	593 aa	Known RBP	11.67	□□□□□ -0.54
HEM12	YDR047W	CUL3	P53202	744 aa		11.67	□□□□□ -0.54
HEM12	YDR047W	YMR018W	Q04364	514 aa		11.67	□□□□□ -0.54
HEM12	YDR047W	YDR461C-A	Q2V2P7	80 aa		11.67	□□□□□ -0.54
HEM12	YDR047W	DPH2	P32461	534 aa		11.66	□□□□□ -0.54
HEM12	YDR047W	RSC30	P38781	883 aa		11.66	□□□□□ -0.54
HEM12	YDR047W	PSY2	P40164	858 aa		11.66	□□□□□ -0.54
HEM12	YDR047W	JJJ1	P53863	590 aa		11.66	□□□□□ -0.54
HEM12	YDR047W	SWI3	P32591	825 aa		11.65	□□□□□ -0.54
HEM12	YDR047W	NFU1	P32860	256 aa		11.65	□□□□□ -0.54
HEM12	YDR047W	EXO5	P38289	585 aa		11.65	□□□□□ -0.54
HEM12	YDR047W	TDA3	P38758	523 aa		11.65	□□□□□ -0.54
HEM12	YDR047W	CIN4	P39110	191 aa		11.65	□□□□□ -0.54
HEM12	YDR047W	MXR1	P40029	184 aa		11.65	□□□□□ -0.54
HEM12	YDR047W	VPS70	P47161	811 aa		11.65	□□□□□ -0.54
HEM12	YDR047W	ASN1	P49089	572 aa	Known RBP	11.65	□□□□□ -0.54
HEM12	YDR047W	ORC5	P50874	479 aa		11.65	□□□□□ -0.54
HEM12	YDR047W	ATG1	P53104	897 aa		11.65	□□□□□ -0.54
HEM12	YDR047W	RPA49	Q01080	415 aa	Predicted RBP	11.65	□□□□□ -0.54
HEM12	YDR047W	NUR1	Q12066	484 aa		11.65	□□□□□ -0.54
HEM12	YDR047W	RMP1	Q12530	201 aa		11.65	□□□□□ -0.54

Retrieved 100 of 5,963 RNA–protein pairs in 63.4 ms