RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeastyeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK1YDR006C ERS1P17261 260 aa3.25□□□□□ -1.89
SOK1YDR006C DBP5P20449 482 aaKnown RBP3.25□□□□□ -1.89
SOK1YDR006C DIT1P21623 536 aa3.25□□□□□ -1.89
SOK1YDR006C NPP1P25353 742 aa3.25□□□□□ -1.89
SOK1YDR006C PET309P32522 965 aaPredicted RBP3.25□□□□□ -1.89
SOK1YDR006C MUD2P36084 527 aaKnown RBP3.25□□□□□ -1.89
SOK1YDR006C ALG3P38179 458 aa3.25□□□□□ -1.89
SOK1YDR006C HXT6P39003 570 aaKnown RBP3.25□□□□□ -1.89
SOK1YDR006C HXT7P39004 570 aa3.25□□□□□ -1.89
SOK1YDR006C HUL4P40985 892 aa3.25□□□□□ -1.89
SOK1YDR006C SNP1Q00916 300 aaPredicted RBP3.25□□□□□ -1.89
SOK1YDR006C NSE5Q03718 556 aa3.25□□□□□ -1.89
SOK1YDR006C TY1A-MR1Q04215 440 aa3.25□□□□□ -1.89
SOK1YDR006C UFO1Q04511 668 aa3.25□□□□□ -1.89
SOK1YDR006C MSD1P15179 658 aaKnown RBP3.25□□□□□ -1.89
SOK1YDR006C ARE1P25628 610 aa3.25□□□□□ -1.89
SOK1YDR006C MLS1P30952 554 aa3.25□□□□□ -1.89
SOK1YDR006C BEM3P32873 1128 aa3.25□□□□□ -1.89
SOK1YDR006C MDJ1P35191 511 aa3.25□□□□□ -1.89
SOK1YDR006C SBE2P42223 864 aaKnown RBP3.25□□□□□ -1.89
SOK1YDR006C YDR341CQ05506 607 aaKnown RBP3.25□□□□□ -1.89
SOK1YDR006C YER152CP10356 443 aa3.24□□□□□ -1.89
SOK1YDR006C NAR1P23503 491 aaKnown RBP3.24□□□□□ -1.89
SOK1YDR006C SSH4P32343 579 aa3.24□□□□□ -1.89
SOK1YDR006C SMY2P32909 740 aaKnown RBP3.24□□□□□ -1.89
SOK1YDR006C MRP8P35719 219 aa3.24□□□□□ -1.89
SOK1YDR006C PBY1P38254 753 aa3.24□□□□□ -1.89
SOK1YDR006C RIM4P38741 713 aa3.24□□□□□ -1.89
SOK1YDR006C ARP9Q05123 467 aa3.24□□□□□ -1.89
SOK1YDR006C ALG6Q12001 544 aaKnown RBP3.24□□□□□ -1.89
SOK1YDR006C CEX1Q12453 761 aa3.24□□□□□ -1.89
SOK1YDR006C RAD53P22216 821 aa3.24□□□□□ -1.89
SOK1YDR006C RPC53P25441 422 aa3.24□□□□□ -1.89
SOK1YDR006C ERG3P32353 365 aa3.24□□□□□ -1.89
SOK1YDR006C VPH1P32563 840 aaKnown RBP3.24□□□□□ -1.89
SOK1YDR006C ECM2P38241 364 aaKnown RBP3.24□□□□□ -1.89
SOK1YDR006C RIC1P40395 1056 aa3.24□□□□□ -1.89
SOK1YDR006C DPH1P40487 425 aaKnown RBP3.24□□□□□ -1.89
SOK1YDR006C VMA13P41807 478 aaKnown RBP3.24□□□□□ -1.89
SOK1YDR006C SKP2P42843 763 aa3.24□□□□□ -1.89
SOK1YDR006C PUS4P48567 403 aaKnown RBP3.24□□□□□ -1.89
SOK1YDR006C HSV2P50079 448 aaPredicted RBP3.24□□□□□ -1.89
SOK1YDR006C TDA9Q04545 1251 aa3.24□□□□□ -1.89
SOK1YDR006C RNH1Q04740 348 aa3.24□□□□□ -1.89
SOK1YDR006C YDR338CQ05497 695 aa3.24□□□□□ -1.89
SOK1YDR006C SYT1Q06836 1226 aa3.24□□□□□ -1.89
SOK1YDR006C TUF1P02992 437 aaKnown RBP3.23□□□□□ -1.89
SOK1YDR006C RPS21AP0C0V8 87 aaKnown RBP3.23□□□□□ -1.89
SOK1YDR006C PTP2P29461 750 aa3.23□□□□□ -1.89
SOK1YDR006C NPL6P32832 435 aa3.23□□□□□ -1.89
SOK1YDR006C RPT5P33297 434 aaKnown RBP3.23□□□□□ -1.89
SOK1YDR006C ADD66P36040 267 aa3.23□□□□□ -1.89
SOK1YDR006C CCT3P39077 534 aaKnown RBP3.23□□□□□ -1.89
SOK1YDR006C MXR1P40029 184 aa3.23□□□□□ -1.89
SOK1YDR006C CNN1P43618 361 aa3.23□□□□□ -1.89
SOK1YDR006C CIT3P43635 486 aa3.23□□□□□ -1.89
SOK1YDR006C ERP6P53198 216 aa3.23□□□□□ -1.89
SOK1YDR006C ELA1P53861 379 aaPredicted RBP3.23□□□□□ -1.89
SOK1YDR006C SCP160P06105 1222 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
SOK1YDR006C AAC3P18238 307 aa3.23□□□□□ -1.89
SOK1YDR006C REC107P21651 314 aa3.23□□□□□ -1.89
SOK1YDR006C ATP12P22135 325 aa3.23□□□□□ -1.89
SOK1YDR006C SPC29P33419 253 aa3.23□□□□□ -1.89
SOK1YDR006C TYS1P36421 394 aaKnown RBP3.23□□□□□ -1.89
SOK1YDR006C SHM2P37291 469 aaKnown RBP3.23□□□□□ -1.89
SOK1YDR006C BAP2P38084 609 aa3.23□□□□□ -1.89
SOK1YDR006C OAF1P39720 1047 aaPredicted RBP3.23□□□□□ -1.89
SOK1YDR006C DOT6P40059 670 aaKnown RBP3.23□□□□□ -1.89
SOK1YDR006C FET4P40988 552 aa3.23□□□□□ -1.89
SOK1YDR006C SEC27P41811 889 aaKnown RBP3.23□□□□□ -1.89
SOK1YDR006C PMT3P47190 753 aa3.23□□□□□ -1.89
SOK1YDR006C LYS5P50113 272 aa3.23□□□□□ -1.89
SOK1YDR006C YNR063WP53749 607 aa3.23□□□□□ -1.89
SOK1YDR006C RCF1Q03713 159 aa3.23□□□□□ -1.89
SOK1YDR006C UTP21Q06078 939 aaPredicted RBP3.23□□□□□ -1.89
SOK1YDR006C SGD1Q06132 899 aa3.23□□□□□ -1.89
SOK1YDR006C TRM8Q12009 286 aa3.23□□□□□ -1.89
SOK1YDR006C SCM3Q12334 223 aa3.23□□□□□ -1.89
SOK1YDR006C CDC9P04819 755 aa3.22□□□□□ -1.89
SOK1YDR006C CDC60P26637 1090 aaKnown RBP3.22□□□□□ -1.89
SOK1YDR006C PPH3P32345 308 aa3.22□□□□□ -1.89
SOK1YDR006C VMA8P32610 256 aaKnown RBP3.22□□□□□ -1.89
SOK1YDR006C GYP8P43570 497 aa3.22□□□□□ -1.89
SOK1YDR006C UTP22P53254 1237 aaPredicted RBP3.22□□□□□ -1.89
SOK1YDR006C SOK2P53438 785 aaPredicted RBP3.22□□□□□ -1.89
SOK1YDR006C ECM9Q02202 377 aa3.22□□□□□ -1.89
SOK1YDR006C LCD1Q04377 747 aa3.22□□□□□ -1.89
SOK1YDR006C SPO75Q07798 868 aa3.22□□□□□ -1.89
SOK1YDR006C RCL1Q08096 367 aaPredicted RBP3.22□□□□□ -1.89
SOK1YDR006C SPE3Q12074 293 aaKnown RBP3.22□□□□□ -1.89
SOK1YDR006C BI4P03879 638 aa3.22□□□□□ -1.89
SOK1YDR006C SRD1P09007 221 aa3.22□□□□□ -1.89
SOK1YDR006C NCP1P16603 691 aaKnown RBP3.22□□□□□ -1.89
SOK1YDR006C SNT1P25357 1226 aa3.22□□□□□ -1.89
SOK1YDR006C DPB3P27344 201 aa3.22□□□□□ -1.89
SOK1YDR006C POT1P27796 417 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
SOK1YDR006C PEX5P35056 612 aa3.22□□□□□ -1.89
SOK1YDR006C PNT1P38969 423 aa3.22□□□□□ -1.89
SOK1YDR006C YIR007WP40566 764 aa3.22□□□□□ -1.89
SOK1YDR006C SAP185P40856 1058 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms