RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C SDH5Q08230 162 aa7.39□□□□□ -1.23
TDP1YBR223C YPL225WQ08971 146 aaKnown RBP7.39□□□□□ -1.23
TDP1YBR223C YLR462WO13556 202 aa7.38□□□□□ -1.23
TDP1YBR223C CBP1P07252 654 aa7.38□□□□□ -1.23
TDP1YBR223C RAD18P10862 487 aa7.38□□□□□ -1.23
TDP1YBR223C DBP5P20449 482 aaKnown RBP7.38□□□□□ -1.23
TDP1YBR223C MED8P38304 223 aa7.38□□□□□ -1.23
TDP1YBR223C HIS2P38635 335 aa7.38□□□□□ -1.23
TDP1YBR223C YHL049CP38722 271 aa7.38□□□□□ -1.23
TDP1YBR223C SAK1P38990 1142 aa7.38□□□□□ -1.23
TDP1YBR223C SPC72P39723 622 aa7.38□□□□□ -1.23
TDP1YBR223C ACA1P39970 489 aa7.38□□□□□ -1.23
TDP1YBR223C YEL075CP39972 122 aa7.38□□□□□ -1.23
TDP1YBR223C KAP123P40069 1113 aaKnown RBP7.38□□□□□ -1.23
TDP1YBR223C LCP5P40079 357 aaPredicted RBP7.38□□□□□ -1.23
TDP1YBR223C YER189WP40104 122 aa7.38□□□□□ -1.23
TDP1YBR223C LCB2P40970 561 aa7.38□□□□□ -1.23
TDP1YBR223C YFL064CP43540 174 aa7.38□□□□□ -1.23
TDP1YBR223C UBP3Q01477 912 aaKnown RBP RIP-Chip data7.38□□□□□ -1.23not detected
TDP1YBR223C SUB2Q07478 446 aaKnown RBP7.38□□□□□ -1.23
TDP1YBR223C YBL111CQ3E7Y5 667 aa7.38□□□□□ -1.23
TDP1YBR223C RAD54P32863 898 aa7.38□□□□□ -1.23
TDP1YBR223C ATG19P35193 415 aa7.38□□□□□ -1.23
TDP1YBR223C UBP11P36026 717 aa7.38□□□□□ -1.23
TDP1YBR223C BCH2P36122 765 aa7.38□□□□□ -1.23
TDP1YBR223C FIS1P40515 155 aa7.38□□□□□ -1.23
TDP1YBR223C DSN1P40568 576 aa7.38□□□□□ -1.23
TDP1YBR223C HUL5P53119 910 aa7.38□□□□□ -1.23
TDP1YBR223C ARK1P53974 638 aa7.38□□□□□ -1.23
TDP1YBR223C YML037CQ03703 340 aa7.38□□□□□ -1.23
TDP1YBR223C SVF1Q05515 481 aa7.38□□□□□ -1.23
TDP1YBR223C ATG20Q07528 640 aa7.38□□□□□ -1.23
TDP1YBR223C CRD1Q07560 283 aa7.38□□□□□ -1.23
TDP1YBR223C SPT2P06843 333 aaPredicted RBP7.37□□□□□ -1.23
TDP1YBR223C CDC33P07260 213 aaKnown RBP7.37□□□□□ -1.23
TDP1YBR223C TCP1P12612 559 aaKnown RBP7.37□□□□□ -1.23
TDP1YBR223C GAP1P19145 602 aaPredicted RBP7.37□□□□□ -1.23
TDP1YBR223C PRP9P19736 530 aaKnown RBP7.37□□□□□ -1.23
TDP1YBR223C KIP1P28742 1111 aa7.37□□□□□ -1.23
TDP1YBR223C NAM7P30771 971 aaKnown RBP7.37□□□□□ -1.23
TDP1YBR223C SEC21P32074 935 aaKnown RBP7.37□□□□□ -1.23
TDP1YBR223C YSC83P32792 385 aa7.37□□□□□ -1.23
TDP1YBR223C SQT1P35184 431 aa7.37□□□□□ -1.23
TDP1YBR223C TRZ1P36159 838 aaPredicted RBP7.37□□□□□ -1.23
TDP1YBR223C EXO5P38289 585 aa7.37□□□□□ -1.23
TDP1YBR223C RRT2P38332 387 aa7.37□□□□□ -1.23
TDP1YBR223C BRO1P48582 844 aa7.37□□□□□ -1.23
TDP1YBR223C RIM8P53179 542 aa7.37□□□□□ -1.23
TDP1YBR223C UTP6Q02354 440 aaKnown RBP7.37□□□□□ -1.23
TDP1YBR223C DON1Q05610 365 aa7.37□□□□□ -1.23
TDP1YBR223C SEY1Q99287 776 aa7.37□□□□□ -1.23
TDP1YBR223C SAM1P10659 382 aaKnown RBP7.36□□□□□ -1.23
TDP1YBR223C PRE10P21242 288 aaKnown RBP RIP-Chip data7.36□□□□□ -1.23not detected
TDP1YBR223C OAF3P36023 863 aa7.36□□□□□ -1.23
TDP1YBR223C TIF5P38431 405 aaKnown RBP7.36□□□□□ -1.23
TDP1YBR223C SAP185P40856 1058 aa7.36□□□□□ -1.23
TDP1YBR223C NMD5P46970 1048 aa7.36□□□□□ -1.23
TDP1YBR223C ATG36P46983 293 aa7.36□□□□□ -1.23
TDP1YBR223C ZPR1P53303 486 aaKnown RBP7.36□□□□□ -1.23
TDP1YBR223C CPR6P53691 371 aaKnown RBP7.36□□□□□ -1.23
TDP1YBR223C YMR187CQ03236 431 aa7.36□□□□□ -1.23
TDP1YBR223C TMA64Q04600 565 aaKnown RBP7.36□□□□□ -1.23
TDP1YBR223C SLX4Q12098 748 aa7.36□□□□□ -1.23
TDP1YBR223C MUD1P32605 298 aaKnown RBP7.35□□□□□ -1.23
TDP1YBR223C GLC3P32775 704 aa7.35□□□□□ -1.23
TDP1YBR223C VPS35P34110 944 aa7.35□□□□□ -1.23
TDP1YBR223C ECM2P38241 364 aaKnown RBP7.35□□□□□ -1.23
TDP1YBR223C INA22P40576 216 aa7.35□□□□□ -1.23
TDP1YBR223C YGR117CP53270 476 aa7.35□□□□□ -1.23
TDP1YBR223C TDA9Q04545 1251 aa7.35□□□□□ -1.23
TDP1YBR223C YLR326WQ06170 240 aaKnown RBP7.35□□□□□ -1.23
TDP1YBR223C AIM7Q12156 149 aa7.35□□□□□ -1.23
TDP1YBR223C YDL206WQ12424 762 aa7.35□□□□□ -1.23
TDP1YBR223C RPB2P08518 1224 aaKnown RBP7.34□□□□□ -1.23
TDP1YBR223C ADH4P10127 382 aa7.34□□□□□ -1.23
TDP1YBR223C GAL2P13181 574 aa7.34□□□□□ -1.23
TDP1YBR223C PRP16P15938 1071 aaPredicted RBP7.34□□□□□ -1.23
TDP1YBR223C SSD1P24276 1250 aaKnown RBP RIP-Chip data7.34□□□□□ -1.23not detected
TDP1YBR223C CDC10P25342 322 aaKnown RBP7.34□□□□□ -1.23
TDP1YBR223C ILV6P25605 309 aaKnown RBP7.34□□□□□ -1.23
TDP1YBR223C CDC48P25694 835 aaKnown RBP7.34□□□□□ -1.23
TDP1YBR223C DBF4P32325 704 aa7.34□□□□□ -1.23
TDP1YBR223C RRN6P32786 894 aa7.34□□□□□ -1.23
TDP1YBR223C TFC4P33339 1025 aa7.34□□□□□ -1.23
TDP1YBR223C TGL1P34163 548 aa7.34□□□□□ -1.23
TDP1YBR223C RPC37P36121 282 aa7.34□□□□□ -1.23
TDP1YBR223C YSW1P38280 609 aa7.34□□□□□ -1.23
TDP1YBR223C ERC1P38767 581 aa7.34□□□□□ -1.23
TDP1YBR223C FET4P40988 552 aa7.34□□□□□ -1.23
TDP1YBR223C CLA4P48562 842 aa7.34□□□□□ -1.23
TDP1YBR223C YGL039WP53183 348 aaKnown RBP7.34□□□□□ -1.23
TDP1YBR223C PNP1Q05788 311 aa7.34□□□□□ -1.23
TDP1YBR223C SPH1Q06160 661 aa7.34□□□□□ -1.23
TDP1YBR223C GUD1Q07729 489 aa7.34□□□□□ -1.23
TDP1YBR223C FRA1Q07825 749 aa7.34□□□□□ -1.23
TDP1YBR223C HIF1Q12373 385 aa7.34□□□□□ -1.23
TDP1YBR223C TY1B-AO13527 1196 aaKnown RBP7.34□□□□□ -1.24
TDP1YBR223C PYC1P11154 1178 aaKnown RBP7.34□□□□□ -1.24
TDP1YBR223C POL3P15436 1097 aa7.34□□□□□ -1.24
TDP1YBR223C GCD6P32501 712 aaKnown RBP7.34□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 60.6 ms