RNA–Protein interactions for RNA: YBR080C

SEC18, Transcript of AAA ATPase and SNARE disassembly chaperone, yeastyeast

Gene SEC18, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC18YBR080C PIN4P34217 668 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
SEC18YBR080C RIM11P38615 370 aa6.36□□□□□ -1.39
SEC18YBR080C HLR1Q04429 423 aa6.36□□□□□ -1.39
SEC18YBR080C GSF2Q04697 403 aaKnown RBP6.36□□□□□ -1.39
SEC18YBR080C ADY3Q07732 790 aa6.36□□□□□ -1.39
SEC18YBR080C BUD20Q08004 166 aaPredicted RBP6.36□□□□□ -1.39
SEC18YBR080C MTH1P35198 433 aa6.36□□□□□ -1.39
SEC18YBR080C MCD4P36051 919 aa6.36□□□□□ -1.39
SEC18YBR080C SEC9P40357 651 aa6.36□□□□□ -1.39
SEC18YBR080C GYP8P43570 497 aa6.36□□□□□ -1.39
SEC18YBR080C CIT3P43635 486 aa6.36□□□□□ -1.39
SEC18YBR080C ALG2P43636 503 aa6.36□□□□□ -1.39
SEC18YBR080C SYF1Q04048 859 aaPredicted RBP6.36□□□□□ -1.39
SEC18YBR080C REX3Q12090 404 aa6.36□□□□□ -1.39
SEC18YBR080C RPC31P17890 251 aa6.35□□□□□ -1.39
SEC18YBR080C FUR1P18562 216 aaKnown RBP6.35□□□□□ -1.39
SEC18YBR080C HOP1P20050 605 aa6.35□□□□□ -1.39
SEC18YBR080C MSH3P25336 1018 aa6.35□□□□□ -1.39
SEC18YBR080C PYC2P32327 1180 aaKnown RBP6.35□□□□□ -1.39
SEC18YBR080C ERT1P38140 529 aa6.35□□□□□ -1.39
SEC18YBR080C DYS1P38791 387 aa6.35□□□□□ -1.39
SEC18YBR080C SPC72P39723 622 aa6.35□□□□□ -1.39
SEC18YBR080C PRP42Q03776 544 aaKnown RBP6.35□□□□□ -1.39
SEC18YBR080C YMR018WQ04364 514 aa6.35□□□□□ -1.39
SEC18YBR080C PEX15Q08215 383 aa6.35□□□□□ -1.39
SEC18YBR080C VHS3Q08438 674 aa6.35□□□□□ -1.39
SEC18YBR080C TRM8Q12009 286 aa6.35□□□□□ -1.39
SEC18YBR080C SMF3Q12078 473 aaPredicted RBP6.35□□□□□ -1.39
SEC18YBR080C TAH18Q12181 623 aa6.35□□□□□ -1.39
SEC18YBR080C YPR071WQ12346 211 aa6.35□□□□□ -1.39
SEC18YBR080C RKM4Q12504 494 aa6.35□□□□□ -1.39
SEC18YBR080C PHR1P05066 565 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
SEC18YBR080C HMG1P12683 1054 aa6.34□□□□□ -1.39
SEC18YBR080C CAB3P36076 571 aa6.34□□□□□ -1.39
SEC18YBR080C ENT3P47160 408 aa6.34□□□□□ -1.39
SEC18YBR080C RAT1Q02792 1006 aaKnown RBP6.34□□□□□ -1.39
SEC18YBR080C BLS1Q06071 122 aa6.34□□□□□ -1.39
SEC18YBR080C YLH47Q06493 454 aa6.34□□□□□ -1.39
SEC18YBR080C GUD1Q07729 489 aa6.34□□□□□ -1.39
SEC18YBR080C NCP1P16603 691 aaKnown RBP6.34□□□□□ -1.39
SEC18YBR080C PHO81P17442 1178 aa6.34□□□□□ -1.39
SEC18YBR080C PET123P17558 318 aa6.34□□□□□ -1.39
SEC18YBR080C ATP12P22135 325 aa6.34□□□□□ -1.39
SEC18YBR080C CDC48P25694 835 aaKnown RBP6.34□□□□□ -1.39
SEC18YBR080C SRP72P38688 640 aaKnown RBP6.34□□□□□ -1.39
SEC18YBR080C RSM26P47141 266 aa6.34□□□□□ -1.39
SEC18YBR080C OCA1P50946 238 aaPredicted RBP6.34□□□□□ -1.39
SEC18YBR080C CPR6P53691 371 aaKnown RBP6.34□□□□□ -1.39
SEC18YBR080C LAP3Q01532 483 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
SEC18YBR080C ARP9Q05123 467 aa6.34□□□□□ -1.39
SEC18YBR080C ENT1Q12518 454 aa6.34□□□□□ -1.39
SEC18YBR080C Q0182Q9ZZW1 134 aa6.34□□□□□ -1.39
SEC18YBR080C SEM1O94742 89 aa6.33□□□□□ -1.4
SEC18YBR080C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4 RIP-Chip
SEC18YBR080C GUK1P15454 187 aaKnown RBP6.33□□□□□ -1.4
SEC18YBR080C SRO9P25567 434 aaKnown RBP6.33□□□□□ -1.4
SEC18YBR080C FBP26P32604 452 aa6.33□□□□□ -1.4
SEC18YBR080C NPR2P39923 615 aa6.33□□□□□ -1.4
SEC18YBR080C GUS1P46655 708 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
SEC18YBR080C TAN1P53072 289 aaPredicted RBP6.33□□□□□ -1.4
SEC18YBR080C BNI5P53890 448 aaKnown RBP6.33□□□□□ -1.4
SEC18YBR080C NCS2P53923 493 aaPredicted RBP6.33□□□□□ -1.4
SEC18YBR080C AOS1Q06624 347 aa6.33□□□□□ -1.4
SEC18YBR080C HIM1Q06674 414 aa6.33□□□□□ -1.4
SEC18YBR080C CPA2P03965 1118 aaKnown RBP6.33□□□□□ -1.4
SEC18YBR080C PDX1P16451 410 aa6.33□□□□□ -1.4
SEC18YBR080C PGS1P25578 521 aa6.33□□□□□ -1.4
SEC18YBR080C BYE1P36106 594 aa6.33□□□□□ -1.4
SEC18YBR080C YEL068CP39977 110 aa6.33□□□□□ -1.4
SEC18YBR080C KAP123P40069 1113 aaKnown RBP6.33□□□□□ -1.4
SEC18YBR080C MAD3P47074 515 aa6.33□□□□□ -1.4
SEC18YBR080C YPL071CQ02864 156 aa6.33□□□□□ -1.4
SEC18YBR080C MLF3P32047 452 aa6.32□□□□□ -1.4
SEC18YBR080C GCD11P32481 527 aaKnown RBP6.32□□□□□ -1.4
SEC18YBR080C DOM34P33309 386 aa6.32□□□□□ -1.4
SEC18YBR080C YBR225WP38321 900 aa6.32□□□□□ -1.4
SEC18YBR080C SKP2P42843 763 aa6.32□□□□□ -1.4
SEC18YBR080C SLD3P53135 668 aa6.32□□□□□ -1.4
SEC18YBR080C SKY1Q03656 742 aa6.32□□□□□ -1.4
SEC18YBR080C RSC3Q06639 885 aa6.32□□□□□ -1.4
SEC18YBR080C APC5Q08683 685 aa6.32□□□□□ -1.4
SEC18YBR080C SSM4P40318 1319 aa6.32□□□□□ -1.4
SEC18YBR080C MTF2P10849 440 aa6.32□□□□□ -1.4
SEC18YBR080C MLS1P30952 554 aa6.32□□□□□ -1.4
SEC18YBR080C YKU70P32807 602 aa6.32□□□□□ -1.4
SEC18YBR080C YKL107WP34251 309 aa6.32□□□□□ -1.4
SEC18YBR080C LAM1P38851 1228 aa6.32□□□□□ -1.4
SEC18YBR080C FIR1P40020 876 aa6.32□□□□□ -1.4
SEC18YBR080C MPH1P40562 993 aa6.32□□□□□ -1.4
SEC18YBR080C VPS53P47061 822 aa6.32□□□□□ -1.4
SEC18YBR080C PUS4P48567 403 aaKnown RBP6.32□□□□□ -1.4
SEC18YBR080C TEP1P53916 434 aa6.32□□□□□ -1.4
SEC18YBR080C PEX13P80667 386 aa6.32□□□□□ -1.4
SEC18YBR080C PEX29Q03370 554 aa6.32□□□□□ -1.4
SEC18YBR080C RAD33Q04231 177 aa6.32□□□□□ -1.4
SEC18YBR080C AVO1Q08236 1176 aa6.32□□□□□ -1.4
SEC18YBR080C RPS31P05759 152 aaKnown RBP6.31□□□□□ -1.4
SEC18YBR080C LEU1P07264 779 aaKnown RBP6.31□□□□□ -1.4
SEC18YBR080C CDC16P09798 840 aa6.31□□□□□ -1.4
SEC18YBR080C VMA2P16140 517 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms